BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,653,836	T→C	intergenic (+123/‑125)	yhiS → / → slp	putative uncharacterized protein YhiS/starvation lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,653,836	0	T	C	100.0%	856.7 / NA	225	intergenic (+123/‑125)	yhiS/slp	putative uncharacterized protein YhiS/starvation lipoprotein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/102); total (123/102)

Only 100 of 225 total aligned reads displayed.

AATATAATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCTAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGTAACATGAACATGAC  >  NC_000913/3653699‑3653971

  tataATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAAc                                                                                                                                     >  2:238255/1‑140 (MQ=255)

  tataATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAAc                                                                                                                                     >  2:575703/1‑140 (MQ=255)

     aataCCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGa                                                                                                                                  <  2:12235/140‑1 (MQ=255)

     aataCCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGa                                                                                                                                  <  1:918679/140‑1 (MQ=255)

       taCCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGaaa                                                                                                                                <  2:257536/140‑1 (MQ=255)

          cATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGa                                                                                                                             >  2:1153920/1‑140 (MQ=255)

          cATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGa                                                                                                                             >  1:833705/1‑140 (MQ=255)

            taataTTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCCAAAAATTAACTGAGTTCACCCAAACAGAAAGGat                                                                                                                            >  1:492412/1‑140 (MQ=255)

            taataTTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGaa                                                                                                                                 <  2:1318980/134‑1 (MQ=255)

            taataTTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGaa                                                                                                                                 >  1:1311380/1‑134 (MQ=255)

            taataTTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGata                                                                                                                           >  2:637449/1‑140 (MQ=255)

             aataTTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGatat                                                                                                                          >  2:106429/1‑140 (MQ=255)

              atatTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGAtata                                                                                                                         <  1:497585/140‑1 (MQ=255)

                  tGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACa                                                                                                                     <  2:374936/140‑1 (MQ=255)

                    attattAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATc                                                                                                                   >  2:393784/1‑140 (MQ=255)

                    attattAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATc                                                                                                                   >  2:749/1‑140 (MQ=255)

                    attattAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATc                                                                                                                   >  2:81871/1‑140 (MQ=255)

                      tattaGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAg                                                                                                                 <  2:841302/140‑1 (MQ=255)

                       attaGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGa                                                                                                                <  2:49767/140‑1 (MQ=255)

                        ttaGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGAc                                                                                                               <  1:1263114/140‑1 (MQ=255)

                         taGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACa                                                                                                              >  1:757078/1‑140 (MQ=255)

                         taGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACa                                                                                                              >  1:107369/1‑140 (MQ=255)

                         taGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACa                                                                                                              >  2:849026/1‑140 (MQ=255)

                         taGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACa                                                                                                              >  2:437843/1‑140 (MQ=255)

                              cTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGttt                                                                                                         >  2:353123/1‑140 (MQ=255)

                              cTTTATAATCATTGAATAAAAATAGATTTTATGTACTATTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGttt                                                                                                         >  2:120629/1‑140 (MQ=255)

                                ttATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTAc                                                                                                       >  1:88326/1‑140 (MQ=255)

                                ttATAATCATTGAATAAAAATAGAATTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTAc                                                                                                       <  1:597846/140‑1 (MQ=255)

                                  ataATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGt                                                                                                     <  2:181191/140‑1 (MQ=255)

                                         ttGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATc                                                                                              >  1:1079712/1‑140 (MQ=255)

                                         ttGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATc                                                                                              >  1:64092/1‑140 (MQ=255)

                                         ttGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATc                                                                                              >  2:1185439/1‑140 (MQ=255)

                                            aaTAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAgg                                                                                           >  2:1013337/1‑140 (MQ=255)

                                                 aaaTAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCatat                                                                                      <  1:1192743/140‑1 (MQ=255)

                                                 aaaTAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCatat                                                                                      <  1:106429/140‑1 (MQ=255)

                                                 aaaTAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCatat                                                                                      <  2:330529/140‑1 (MQ=255)

                                                           tATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGaa                                                                            >  2:497498/1‑140 (MQ=255)

                                                            aTGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAAt                                                                           <  1:1006044/140‑1 (MQ=255)

                                                            aTGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAAt                                                                           >  1:933133/1‑140 (MQ=255)

                                                            aTGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAAt                                                                           <  1:358529/140‑1 (MQ=255)

                                                                   tttAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGa                                                                    <  2:684320/140‑1 (MQ=255)

                                                                   tttAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGa                                                                    >  2:196825/1‑140 (MQ=255)

                                                                    ttAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAAt                                                                           <  1:929343/132‑1 (MQ=255)

                                                                    ttAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGaa                                                                   <  1:541400/140‑1 (MQ=255)

                                                                           aaTGCGCTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACtata                                                            <  1:140587/140‑1 (MQ=255)

                                                                           aaTGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACtata                                                            <  2:1261225/140‑1 (MQ=255)

                                                                           aaTGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACtata                                                            <  1:326084/140‑1 (MQ=255)

                                                                            aTGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTATGTTACTATCAGGCATATCACCTCAGAATCAGATGaa                                                                   >  1:1046259/1‑132 (MQ=255)

                                                                            aTGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATaa                                                           >  2:1395431/1‑140 (MQ=255)

                                                                             tGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACAGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATaaa                                                          >  1:579541/1‑140 (MQ=255)

                                                                                  tataTTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAat                                                     <  2:518088/140‑1 (MQ=255)

                                                                                    tattatGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAatat                                                   <  2:126026/140‑1 (MQ=255)

                                                                                    tattatGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAatat                                                   >  2:13570/1‑140 (MQ=255)

                                                                                         tGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAatat                                                   >  2:104529/1‑135 (MQ=255)

                                                                                         tGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCtatt                                              >  2:1243458/1‑140 (MQ=255)

                                                                                          ggggTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCtatta                                             <  2:46649/140‑1 (MQ=255)

                                                                                           gggTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTTCTATCAGGCATATCCCCTCAGAATCAGATGAAAACTATAAAGAAATATCtattat                                            <  1:1210198/140‑1 (MQ=255)

                                                                                            ggTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACtata                                                            >  1:249634/1‑123 (MQ=255)

                                                                                            ggTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATg                                           >  2:543550/1‑140 (MQ=255)

                                                                                            ggTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATg                                           >  1:1319359/1‑140 (MQ=255)

                                                                                            ggTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATg                                           >  1:388350/1‑140 (MQ=255)

                                                                                             gTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATgg                                          >  1:1026124/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCtattat                                            <  1:513596/137‑1 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCtatta                                             <  1:1236187/136‑1 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  1:18679/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  1:33128/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  1:434033/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  1:574169/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  1:1175652/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  2:274040/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  1:866791/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  2:22753/1‑140 (MQ=255)

                                                                                              tGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGt                                         >  2:928845/1‑140 (MQ=255)

                                                                                               gATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGtt                                        >  2:371260/1‑140 (MQ=255)

                                                                                                aTGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAat                                                     <  2:930901/126‑1 (MQ=255)

                                                                                                aTGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGttt                                       >  2:89659/1‑140 (MQ=255)

                                                                                                aTGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGttt                                       >  2:942633/1‑140 (MQ=255)

                                                                                                 tGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGtttt                                      <  2:149968/140‑1 (MQ=255)

                                                                                                       ttCATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATAtt                                <  1:459329/140‑1 (MQ=255)

                                                                                                         cATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATttg                              <  1:849026/140‑1 (MQ=255)

                                                                                                         cATGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATttg                              <  2:638964/140‑1 (MQ=255)

                                                                                                         acagTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATttg                              <  1:504040/137‑1 (MQ=255)

                                                                                                          aTGTCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATttgt                             >  2:425305/1‑140 (MQ=255)

                                                                                                             tCACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGa                          >  1:1438897/1‑140 (MQ=255)

                                                                                                              cACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGAt                         <  2:946027/140‑1 (MQ=255)

                                                                                                              cACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGAt                         <  1:22753/140‑1 (MQ=255)

                                                                                                              cACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGAt                         <  1:89659/140‑1 (MQ=255)

                                                                                                              cACGCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGAt                         <  2:1079712/140‑1 (MQ=255)

                                                                                                                 gCCCC‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAg                      >  2:581034/1‑140 (MQ=255)

                                                                                                                  cccc‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAgg                     >  1:275900/1‑140 (MQ=255)

                                                                                                                  cccc‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAgg                     <  1:1260098/140‑1 (MQ=255)

                                                                                                                  cccc‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAgg                     >  1:694448/1‑140 (MQ=255)

                                                                                                                  cccc‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAgg                     >  2:858924/1‑140 (MQ=255)

                                                                                                                  cccc‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAgg                     >  2:1310944/1‑140 (MQ=255)

                                                                                                                     c‑AAAATTAACTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATa                  <  2:718897/140‑1 (MQ=255)

                                                                                                                              aCTGAGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGTaacatg          >  1:180258/1‑140 (MQ=255)

                                                                                                                                  aGTTCACCCAAACAGAAAGGATATAAACATCAGACAGGATTACGTTACTATCAGGCATATCACCTCAGAATCAGATGCAAACTATAAAGATATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGCaacatgaaca      >  2:1243040/1‑140 (MQ=255)

                                                                                                                                   gTTCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGTaacatgaacat     <  1:217555/140‑1 (MQ=255)

                                                                                                                                     tCACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGTAacatgaacatga   >  2:205564/1‑140 (MQ=255)

                                                                                                                                      cACCCAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGTAACATGAACATGAc  >  1:738285/1‑140 (MQ=255)

AATATAATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGCACTATATTATGGGGTGATGGATATTCATGTCACGCCCC‑AAAATTAACTGAGTTCACCTAAACAGAAAGGATATAAACATCAGACAGGTTTACGTTACTATCAGGCATATCACCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATATTTGTTGATAAGGATAGTAACATGAACATGAC  >  NC_000913/3653699‑3653971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`