Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	602,793	C→T	P279S (CCG→TCG)	pheP →	phenylalanine:H(+) symporter PheP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	602,793	0	C	T	100.0%	303.7 / NA	86	P279S (CCG→TCG)	pheP	phenylalanine:H(+) symporter PheP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (43/43);  total (43/43)

CTGAAGCGCGCGATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCTGT  >  NC_000913/602656‑602929                                                                                                                                          |                                                                                                                                         cTGAAGCGCGCGATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCg                                                                                                                                        <  2:15988/140‑1 (MQ=255)        gcgcgATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGtga                                                                                                                                 >  1:1336340/1‑140 (MQ=255)        gcgcgATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGtga                                                                                                                                 <  1:1174242/140‑1 (MQ=255)         cgcgATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGtgat                                                                                                                                >  1:389940/1‑140 (MQ=255)             aTCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGAtt                                                                                                                            <  2:826132/140‑1 (MQ=255)                 ggAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTcc                                                                                                                        <  1:476967/140‑1 (MQ=255)                    aaaaaGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATa                                                                                                                     <  1:220468/140‑1 (MQ=255)                        aGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAAtct                                                                                                                 >  1:290168/1‑140 (MQ=255)                        aGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAAtct                                                                                                                 >  1:116131/1‑140 (MQ=255)                        aGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAAtcc                                                                                                                 >  1:875834/1‑139 (MQ=255)                           aTTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGa                                                                                                              <  2:1336340/140‑1 (MQ=255)                           aTTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGa                                                                                                              <  2:389940/140‑1 (MQ=255)                            ttCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGAc                                                                                                             <  1:729132/140‑1 (MQ=255)                             tCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACa                                                                                                            >  2:147059/1‑140 (MQ=255)                              ccAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAg                                                                                                           <  2:290168/140‑1 (MQ=255)                                       gTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGt                                                                                                  >  1:470923/1‑140 (MQ=255)                                       gTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGt                                                                                                  <  1:757330/140‑1 (MQ=255)                                       gTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGt                                                                                                  <  2:512526/140‑1 (MQ=255)                                            tCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCtt                                                                                             <  1:814549/140‑1 (MQ=255)                                                  ggtgTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTgcgc                                                                                       >  2:697806/1‑140 (MQ=255)                                                  ggtgTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTgcgc                                                                                       >  1:450842/1‑140 (MQ=255)                                                  ggtgTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTgcgc                                                                                       <  2:1389891/140‑1 (MQ=255)                                                    tgtATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTg                                                                                     >  2:278511/1‑140 (MQ=255)                                                      tATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGaa                                                                                   >  2:1232707/1‑140 (MQ=255)                                                      tATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGaa                                                                                   <  2:875834/140‑1 (MQ=255)                                                      tATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGaa                                                                                   <  2:3797/140‑1 (MQ=255)                                                      tATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGaa                                                                                   >  1:915514/1‑140 (MQ=255)                                                      tATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCAATAATCTCGAAAGCAACGTGGTAGCTTCTGCGCTGaa                                                                                   >  2:979342/1‑140 (MQ=255)                                                      tATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGGGAAATACAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAAAGTGGTAGCTTCTGCGCTGaa                                                                                   >  2:551967/1‑140 (MQ=255)                                                           cATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCg                                                                              <  2:450842/140‑1 (MQ=255)                                                             tCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTc                                                                            >  2:432051/1‑140 (MQ=255)                                                             tCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTc                                                                            >  1:672985/1‑140 (MQ=255)                                                             tCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTc                                                                            >  1:1105654/1‑140 (MQ=255)                                                              ccTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCa                                                                           >  2:653017/1‑140 (MQ=255)                                                              ccTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCa                                                                           >  1:971459/1‑140 (MQ=255)                                                              ccTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCa                                                                           >  2:928109/1‑140 (MQ=255)                                                              ccTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCa                                                                           <  2:116131/140‑1 (MQ=255)                                                                tgctgTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGGGCTGAACTTCGTCAtt                                                                         >  1:979875/1‑140 (MQ=255)                                                                  ctgTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCt                                                                       >  2:848517/1‑140 (MQ=255)                                                                    gTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTgg                                                                     <  1:46187/140‑1 (MQ=255)                                                                        tACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGc                                                                 <  1:1232707/140‑1 (MQ=255)                                                                             cGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGc                                                            >  1:30522/1‑140 (MQ=255)                                                                               gTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTg                                                          >  2:1132984/1‑140 (MQ=255)                                                                                ttCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGt                                                         <  2:971459/140‑1 (MQ=255)                                                                                ttCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGt                                                         <  1:552878/140‑1 (MQ=255)                                                                                     tggtggTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAgtg                                                    <  1:653017/140‑1 (MQ=255)                                                                                       gtggtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGta                                                  <  1:432051/140‑1 (MQ=255)                                                                                         ggtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGtata                                                >  2:444221/1‑140 (MQ=255)                                                                                          gtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCa                                                       <  2:1162852/132‑1 (MQ=255)                                                                                          gtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCa                                                       >  1:1162852/1‑132 (MQ=255)                                                                                          gtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATaa                                               >  2:1198449/1‑140 (MQ=255)                                                                                          gtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATaa                                               >  1:784489/1‑140 (MQ=255)                                                                                          gtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATaa                                               >  2:301279/1‑140 (MQ=255)                                                                                          gtTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATaa                                               >  2:684037/1‑140 (MQ=255)                                                                                             ttACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAg                                            >  1:1143924/1‑140 (MQ=255)                                                                                             ttACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAg                                            <  2:30522/140‑1 (MQ=255)                                                                                              tACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGc                                           <  2:85122/140‑1 (MQ=255)                                                                                              tACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGc                                           <  1:697806/140‑1 (MQ=255)                                                                                              tACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGc                                           <  2:1143924/140‑1 (MQ=255)                                                                                               aCTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCg                                          >  2:598483/1‑140 (MQ=255)                                                                                                  ggCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCgggg                                       <  1:278511/140‑1 (MQ=255)                                                                                                  ggCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCgggg                                       <  2:470923/140‑1 (MQ=255)                                                                                                   gcgcTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGt                                      >  1:1296598/1‑140 (MQ=255)                                                                                                     gcTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGttt                                    <  1:805621/140‑1 (MQ=255)                                                                                                          aTCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTActct                               <  1:684037/140‑1 (MQ=255)                                                                                                          aTCCGTGGGTGGAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTActct                               <  1:1029277/140‑1 (MQ=255)                                                                                                                gggtggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACa                           <  2:734316/138‑1 (MQ=255)                                                                                                                gggtggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACa                           >  1:734316/1‑138 (MQ=255)                                                                                                                 ggtggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGcc                        >  1:1113456/1‑140 (MQ=255)                                                                                                                   tggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGc                      >  2:1029570/1‑140 (MQ=255)                                                                                                                   tggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGc                      >  2:912800/1‑140 (MQ=255)                                                                                                                   tggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGc                      >  1:729441/1‑140 (MQ=255)                                                                                                                   tggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGc                      >  2:666441/1‑140 (MQ=255)                                                                                                                   tggAAGTGAAATCCAACAGTAGCTCGTTTGTGATGACTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGc                      >  1:1358386/1‑140 (MQ=255)                                                                                                                              tCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTgg           <  2:441527/140‑1 (MQ=255)                                                                                                                              tCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTgg           <  1:598483/140‑1 (MQ=255)                                                                                                                              tCCAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTgg           <  2:915514/140‑1 (MQ=255)                                                                                                                                cAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGcc         >  1:1067544/1‑140 (MQ=255)                                                                                                                                cAACAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGcc         >  1:553020/1‑140 (MQ=255)                                                                                                                                   cAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCttt      <  2:341319/140‑1 (MQ=255)                                                                                                                                   cAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCttt      <  2:16442/140‑1 (MQ=255)                                                                                                                                   cAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCttt      <  1:912800/140‑1 (MQ=255)                                                                                                                                   cAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCttt      <  1:848517/140‑1 (MQ=255)                                                                                                                                   cAGTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCttt      <  1:1176656/140‑1 (MQ=255)                                                                                                                                     gTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCt    <  1:147059/140‑1 (MQ=255)                                                                                                                                     gTAGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCt    >  1:122261/1‑140 (MQ=255)                                                                                                                                       aGCTCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCtgt  <  1:928109/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                         CTGAAGCGCGCGATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCTGT  >  NC_000913/602656‑602929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑