| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,181,664 | T→C | G140G (GGT→GGC) | rpoB → | RNA polymerase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,181,664 | 0 | T | C | 98.9% | 317.0 / ‑6.0 | 87 | G140G (GGT→GGC) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (46/40); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGTACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGA > NC_000913/4181528‑4181798 | cGCTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACt > 1:365808/1‑140 (MQ=255) cTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGa > 1:910061/1‑140 (MQ=255) cTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGa < 2:910061/140‑1 (MQ=255) aCTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCg < 2:365808/140‑1 (MQ=255) tGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGtt > 1:237423/1‑140 (MQ=255) gTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCt > 2:1309148/1‑140 (MQ=255) tGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTg < 1:1010892/140‑1 (MQ=255) gATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGc < 1:1286948/140‑1 (MQ=255) tATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCg > 1:205035/1‑140 (MQ=255) gAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAg > 1:1239655/1‑140 (MQ=255) aGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGt > 2:237452/1‑140 (MQ=255) aGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGt > 2:539623/1‑140 (MQ=255) aGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGt > 1:1346322/1‑140 (MQ=255) aGCGCGAAGCGCCGGAAGGCACCGAAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGt > 2:621105/1‑140 (MQ=255) gcgcGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTc > 2:558734/1‑140 (MQ=255) cgcgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTcc > 2:1347663/1‑140 (MQ=255) gcgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCg > 1:962196/1‑140 (MQ=255) cgAAGCGCTGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGTACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCgg > 2:149757/1‑140 (MQ=255) cgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCgg > 2:1437486/1‑140 (MQ=255) cgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCgg > 1:717437/1‑140 (MQ=255) cgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCgg > 2:382766/1‑140 (MQ=255) cgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCgg > 1:1115436/1‑140 (MQ=255) cgAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCgg > 2:325664/1‑140 (MQ=255) gAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCggg > 2:354387/1‑140 (MQ=255) aaGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGc > 1:878951/1‑140 (MQ=255) aGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCg < 2:250091/140‑1 (MQ=255) gcgcCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGt < 2:1354947/140‑1 (MQ=255) cgcCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGtc < 1:409842/140‑1 (MQ=255) cgcCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGtc < 2:962196/140‑1 (MQ=255) gcCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGtct < 2:542407/140‑1 (MQ=255) ccGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGtctt > 2:1378771/1‑140 (MQ=255) gAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTcttctt < 2:878951/140‑1 (MQ=255) aaGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCttt < 2:205035/140‑1 (MQ=255) cACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACt > 2:263574/1‑140 (MQ=255) cACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACt > 1:498210/1‑140 (MQ=255) aCCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTc > 1:170309/1‑140 (MQ=255) cGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCg > 1:646135/1‑140 (MQ=255) tAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGAc > 2:896182/1‑140 (MQ=255) aaaaGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACa < 2:81062/140‑1 (MQ=255) aaaaGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACa < 1:1099411/140‑1 (MQ=255) aaaaGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACa < 1:237452/140‑1 (MQ=255) aaaGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACaa < 1:960719/140‑1 (MQ=255) aTTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTaa < 2:85181/140‑1 (MQ=255) aTTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTaa > 2:730605/1‑140 (MQ=255) aTTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTaa > 1:85181/1‑140 (MQ=255) aTTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTaa < 1:584327/140‑1 (MQ=255) cAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCActc > 2:191535/1‑140 (MQ=255) gaagTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTc > 2:1148886/1‑140 (MQ=255) gaagTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTc < 2:170309/140‑1 (MQ=255) agTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTc < 1:356237/138‑1 (MQ=255) agTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTc > 2:356237/1‑138 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACTGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa < 1:492526/140‑1 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa < 1:382766/140‑1 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa < 1:1437486/140‑1 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa < 1:392675/140‑1 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa < 1:580651/140‑1 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa > 2:178971/1‑140 (MQ=255) cTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTCTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTa < 1:191535/140‑1 (MQ=255) aCATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTaaa < 1:263574/140‑1 (MQ=255) aCATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTaaa < 2:717437/140‑1 (MQ=255) gggCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGc < 1:180926/140‑1 (MQ=255) gggCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGc > 2:1024656/1‑140 (MQ=255) cGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGt > 2:127633/1‑135 (MQ=255) cGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGt < 1:127633/135‑1 (MQ=255) cGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGt > 1:867668/1‑140 (MQ=255) cGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGt > 1:813983/1‑140 (MQ=255) cGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGt > 2:681463/1‑140 (MQ=255) cGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAA‑CCACTCTCCGGGTAAAGTGCTGta > 2:1263223/1‑140 (MQ=255) aaaTTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGtat < 2:498210/140‑1 (MQ=255) aaTTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGtata < 2:867668/140‑1 (MQ=255) cTCATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAAcgcgcg < 2:283966/140‑1 (MQ=255) cATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTa < 2:1115436/140‑1 (MQ=255) cATGACAGACAACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTa < 1:730605/140‑1 (MQ=255) cagacaACGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTatcatc < 2:646135/140‑1 (MQ=255) aCGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTAc > 1:617731/1‑140 (MQ=255) aCGGTACCTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTAc > 1:849412/1‑140 (MQ=255) ccTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGt < 1:178971/140‑1 (MQ=255) cTTTGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGtt < 1:1148886/140‑1 (MQ=255) ttGTTATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTcc > 1:652636/1‑140 (MQ=255) ttATCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCctgg > 2:820785/1‑140 (MQ=255) aTCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCctggct > 2:401991/1‑140 (MQ=255) tCAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCctggctg < 1:325664/140‑1 (MQ=255) cAACGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCctggctgg < 1:820785/140‑1 (MQ=255) aaCGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGtt < 1:903169/130‑1 (MQ=255) aaCGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGtt > 2:903169/1‑130 (MQ=255) aaCGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGa > 1:141556/1‑140 (MQ=255) aaCGGCACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGa > 2:922120/1‑140 (MQ=255) | CGCTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGTACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGA > NC_000913/4181528‑4181798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |