Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,307,688 IS1 (+) +9 bp coding (165‑173/1890 nt) deaD ← ATP‑dependent RNA helicase DeaD

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)121 (1.190) 73/276 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 3307688 = 0 (0.000)coding (173/1890 nt) deaD ATP‑dependent RNA helicase DeaD
* ? NC_000913 = 33076960 (0.000)105 (1.030) 68/276 0.2 100% coding (165/1890 nt) deaD ATP‑dependent RNA helicase DeaD
?NC_000913 3583428 = NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 235 total aligned reads displayed.

TACGCCGCGCATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTCAGGCC  >  NC_000913/3307549‑3307827
                                                                                                                                           |                                                                                                                                           
  cgccgcGCATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCa                                                                                                                                           >  2:933686/1‑140 (MQ=255)
  cgccgcGCATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCa                                                                                                                                           <  1:1023204/140‑1 (MQ=255)
   taacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAg                                                                                                                                          <  1:374266‑M2/4‑1 (MQ=255)
       cgcATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGtttt                                                                                                                                      >  1:1645745/1‑140 (MQ=255)
         cATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAAtgctg                                                                                                                                             <  1:1569480/131‑1 (MQ=255)
         cATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAAtgctg                                                                                                                                             >  2:1569480/1‑131 (MQ=255)
           atctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCg                                                                                                                                  >  2:450113‑M2/129‑140 (MQ=255)
            gtgtTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtg                                                                                                                                 <  2:696321‑M1/140‑5 (MQ=255)
                ttAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgc                                                                                                                             <  2:1341248‑M1/140‑9 (MQ=255)
                aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTccc                                                                                                                             >  2:302107‑M2/124‑140 (MQ=255)
                 aggcagcacctggcacggctggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTcccc                                                                                                                            >  2:95469‑M2/123‑140 (MQ=255)
                   gagaAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgc                                                                                                                          <  1:744176‑M1/140‑12 (MQ=255)
                     gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCt                                                                                                                        <  2:1492001‑M2/22‑1 (MQ=255)
                     gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCt                                                                                                                        <  2:644171‑M2/22‑1 (MQ=255)
                      aaaTCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaa                                                                                                                       <  2:344340‑M1/140‑15 (MQ=255)
                      aaaTCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtga                                                                                                                                >  2:204004‑M1/1‑126 (MQ=255)
                      aaaTCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtga                                                                                                                                <  1:204004‑M1/131‑6 (MQ=255)
                        cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTggg                                                                                                                     >  1:766361‑M2/116‑140 (MQ=255)
                        cctggcacgactgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagacattaccGCAGTTTTTCCGCTCCCCGTCTggg                                                                                                                     <  2:199350‑M2/25‑1 (MQ=255)
                        aTCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaact                                                                                                                     <  2:1221062‑M1/140‑17 (MQ=255)
                         tCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaactt                                                                                                                    >  1:583531‑M1/1‑123 (MQ=255)
                          tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGcc                                                                                                                   <  1:750330‑M2/27‑1 (MQ=255)
                          tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGcc                                                                                                                   <  2:1412932‑M2/27‑1 (MQ=255)
                          tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGcc                                                                                                                   <  1:531334‑M2/27‑1 (MQ=255)
                          tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGcc                                                                                                                   >  1:1204707‑M2/114‑140 (MQ=255)
                               aTTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgat                                                                                                              <  2:554753‑M1/140‑24 (MQ=255)
                               aTTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgat                                                                                                              <  2:346083‑M1/140‑24 (MQ=255)
                                ttGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatt                                                                                                             <  2:99136‑M1/140‑25 (MQ=255)
                                ttGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatt                                                                                                             <  1:797084‑M1/140‑25 (MQ=255)
                                  gCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgattta                                                                                                           <  2:1103226‑M1/140‑27 (MQ=255)
                                  gCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgattta                                                                                                           <  2:1090017‑M1/140‑27 (MQ=255)
                                   cTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTACCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttag                                                                                                          >  1:1237827‑M1/1‑113 (MQ=255)
                                      cAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgt                                                                                                       >  1:446100‑M1/1‑110 (MQ=255)
                                       acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGt                                                                                                      <  1:1162581‑M2/40‑1 (MQ=255)
                                         cAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatg                                                                                                    >  1:1593974‑M1/1‑107 (MQ=255)
                                          aaCCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatga                                                                                                   <  2:1237827‑M1/140‑35 (MQ=255)
                                                 aCCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                            >  1:558347‑M1/1‑99 (MQ=255)
                                                   cGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                          >  2:802067‑M1/1‑97 (MQ=255)
                                                   cGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                          <  2:583643‑M1/140‑44 (MQ=255)
                                                     cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTcagc                                                                                        <  2:1617624‑M2/54‑1 (MQ=255)
                                                     ccAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                        >  2:1575461‑M1/1‑95 (MQ=255)
                                                     ccAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                >  2:1647448‑M1/1‑95 (MQ=255)
                                                        gTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                                                     <  2:1296105‑M1/140‑49 (MQ=255)
                                                         ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGAt                                                                                    <  1:296754‑M2/58‑1 (MQ=255)
                                                         ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGAt                                                                                    <  2:863992‑M2/58‑1 (MQ=255)
                                                          tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGAtg                                                                                   <  1:392023‑M2/59‑1 (MQ=255)
                                                           caaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGAtgt                                                                                  <  2:244215‑M2/60‑1 (MQ=255)
                                                              aatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGa                                                                               >  1:11847‑M2/78‑140 (MQ=255)
                                                                    tggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATacac                                                                         >  1:945059‑M2/72‑140 (MQ=255)
                                                                    tggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATacac                                                                         <  1:1713738‑M2/69‑1 (MQ=255)
                                                                              tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGaa                                                               >  1:1375582‑M2/62‑140 (MQ=255)
                                                                              tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGaa                                                               <  2:564482‑M2/79‑1 (MQ=255)
                                                                              tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGaa                                                               <  1:352522‑M2/79‑1 (MQ=255)
                                                                              cAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                               <  1:1575461‑M1/140‑71 (MQ=255)
                                                                              cAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                               <  2:1422265‑M1/140‑71 (MQ=255)
                                                                              cAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                               <  1:311250‑M1/140‑71 (MQ=255)
                                                                                gAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                                             >  1:615415‑M1/1‑68 (MQ=255)
                                                                                    cTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                                                         <  1:908661‑M1/140‑77 (MQ=255)
                                                                                         tcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGt                                                    >  2:583204‑M2/51‑140 (MQ=255)
                                                                                          tgCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                   <  2:1079093‑M1/140‑83 (MQ=255)
                                                                                           gCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                  >  1:936936‑M1/1‑57 (MQ=255)
                                                                                               attatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCg                                              <  2:254597‑M2/96‑1 (MQ=255)
                                                                                                ttatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGt                                             >  1:603831‑M2/44‑140 (MQ=255)
                                                                                                ttatctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGt                                             <  1:687584‑M2/97‑1 (MQ=255)
                                                                                                 aGCTCCGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                            <  2:702345‑M1/140‑90 (MQ=255)
                                                                                                  atctgaacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTaa                                           <  2:766361‑M2/99‑1 (MQ=255)
                                                                                                       aacataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCg                                              <  1:1414281‑M2/96‑1 (MQ=255)
                                                                                                        gATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                     <  1:718753‑M1/140‑97 (MQ=255)
                                                                                                        gATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                     <  2:615415‑M1/140‑97 (MQ=255)
                                                                                                        acataaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCAAGAACATCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGa                                     <  1:320384‑M2/105‑1 (MQ=255)
                                                                                                            aaaacactatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGt                                 >  2:531626‑M2/32‑140 (MQ=255)
                                                                                                             aaacactatcaataagttggagtcattaacGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGtt                                >  2:1154085‑M2/31‑140 (MQ=255)
                                                                                                                 actatcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAgg                            <  2:692033‑M2/114‑1 (MQ=255)
                                                                                                                  cTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttactatcagctgtccctcctgttcagctactgacggggtg                           >  1:878222‑M1/1‑34 (MQ=255)
                                                                                                                   tGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                          >  2:337224‑M1/1‑33 (MQ=255)
                                                                                                                    atcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCt                         >  2:494264‑M2/24‑140 (MQ=255)
                                                                                                                     tcaataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCtt                        >  2:177441‑M2/23‑140 (MQ=255)
                                                                                                                      caataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTc                       <  1:635530‑M2/119‑1 (MQ=255)
                                                                                                                      caataagttggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTc                       >  2:1127465‑M2/22‑140 (MQ=255)
                                                                                                                         agagGTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgta                    <  1:1679793‑M1/140‑114 (MQ=255)
                                                                                                                             gTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                >  2:1373527‑M1/1‑23 (MQ=255)
                                                                                                                             gTAAAGAGAATGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg                           <  1:14883‑M1/129‑107 (MQ=255)
                                                                                                                               ggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAgg              >  1:462579‑M2/13‑140 (MQ=255)
                                                                                                                               ggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAgg              >  2:898999‑M2/13‑140 (MQ=255)
                                                                                                                               ggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAgg              >  1:987809‑M2/13‑140 (MQ=255)
                                                                                                                               ggagtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAgg              >  2:796338‑M2/13‑140 (MQ=255)
                                                                                                                                 agtcattaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGACATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAg            >  2:673653‑M2/11‑140 (MQ=255)
                                                                                                                                     attaccGCAGTTTTTCCGCTCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGa                  <  1:669149‑M2/123‑1 (MQ=255)
                                                                                                                                     aaTGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca        >  1:1304264‑M1/1‑15 (MQ=255)
                                                                                                                                      ttaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTc       <  1:555914‑M2/135‑1 (MQ=255)
                                                                                                                                      ttaccGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTc       <  2:137901‑M2/135‑1 (MQ=255)
                                                                                                                                      aTGCTGCAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac       <  1:1102458‑M1/140‑127 (MQ=255)
                                                                                                                                       tgctgcAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc      >  1:1053276‑M1/1‑13 (MQ=255)
                                                                                                                                       tgctgcAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc      >  2:1632173‑M1/1‑13 (MQ=255)
                                                                                                                                          tgcAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc   >  1:221128‑M1/1‑10 (MQ=255)
                                                                                                                                          tgcAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc   >  2:416177‑M1/1‑10 (MQ=255)
                                                                                                                                           gcAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg  <  2:1036932‑M1/140‑132 (MQ=255)
                                                                                                                                           gcAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTCAGGcc  <  1:1389562/140‑1 (MQ=255)
                                                                                                                                           gcAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTCAGGcc  <  1:837142/140‑1 (MQ=255)
                                                                                                                                           gcAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTCAGGcc  <  1:487225/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TACGCCGCGCATGTGTTTAGAGAAATCCGTCATTGCTTCAGCAACCTGTACCGCCAGTTCGCGGGTCGGTGCCAGCACCAGAATCTGTGGTGCTTTCAGCTCAGGATCAAGATTCTGCAACAGAGGTAAAGAGAATGCTGCAGTTTTTCCGCTCCCCGTCTGGGCCATACCCAGAACGTCGCGGCCATTCAGCAGATGTGGAATACACTCTGCCTGAATTGGAGATGGTTTTTCGTAACCCAGATCGTTAAGGGCTTCAAGGATAGGAGCCTTCAGGCC  >  NC_000913/3307549‑3307827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.