| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,745,397 | 0 | A | C | 22.7% | 132.8 / 10.7 | 67 | L198F (TTA→TTC) | yiaN | 2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit |
| Reads supporting (aligned to +/- strand): ref base A (31/20); new base C (0/15); total (31/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.32e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCG > NC_000913/3745259‑3745530 | ttCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTAc > 1:956554/1‑140 (MQ=255) tttATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGGATTTCCCCCGGGATGATTATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCCGGGCAGTCGCCTTAATTTACCCCCCCAGCa > 2:1575991/1‑140 (MQ=255) tttATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCa > 1:1478558/1‑140 (MQ=255) cTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGTCCCCGGCGCGTTGAATGGCGCAACGCTGATGCTTTTCCGGGGGGGGGAGGCCCGTCGGCCTAATTTTCCCCCCCCCCTAAAACCaa > 2:531953/1‑140 (MQ=255) cTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTATCCCCGGCCTTGTGATGGGCGGAACGCTTGTGCTTGCTTGGGGGAGGGAGGACGGTTGGCTTGATTTACCCCGCCCCGAAAAAGCaa > 2:338732/1‑140 (MQ=255) cTTCGGCGTTGCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGTCATTGCCCCTGGTATGAGGATGGGCGCAACGCTGATGCTTTCGTGGTGGTGGCAGGCCAGTCGCCTTACTTTGCCCCGCCAGCAAAAAGCaa < 2:694585/140‑1 (MQ=255) tCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACg > 1:250537/1‑140 (MQ=255) tCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACGCTGATGCTTTCCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAACAACg > 1:673945/1‑140 (MQ=255) cGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGGGGCAGGCCAGTCGCCTTAATTTTCCCCGCCAGCAAAAAACAACGa > 2:1283887/1‑140 (MQ=255) ttCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCCGCAAAAAGCAACGATGCAgg > 1:1494479/1‑140 (MQ=255) aTTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAgg < 1:27264/131‑1 (MQ=255) aTTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGc < 1:176749/140‑1 (MQ=255) aTTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAgg > 2:27264/1‑131 (MQ=255) aTTATCCATCAGTAAGCTGTTTAGGGGGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTCCCTGGTGGGGGCAGGCCAGTCCCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGc < 1:531953/140‑1 (MQ=255) aTCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGAAAAGATGCAGGAAATCTGGCACTCttt > 2:760333/1‑140 (MQ=255) cAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTg < 1:951728/140‑1 (MQ=255) cAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGGGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCCGCAAAAAACAACGATGCAGGAAATCTGGCACTCttttt > 2:217167/1‑139 (MQ=255) aGTAAGCTTTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTCCCTGGTGGTGGCAGGCCAGTCGCCTTATTTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGt < 1:1188091/140‑1 (MQ=255) aGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGt < 2:1478558/140‑1 (MQ=255) tAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGGGGCAGGCCAGGCGCCTTAATTTACCCCCCCAGCAAAAAGCAACGATGCAGGAAAACTGGCACTCTTTTTtcc > 2:1645130/1‑139 (MQ=255) tAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGGGGTGGCAGGCCAGGCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTTtct > 1:1543876/1‑140 (MQ=255) tAAGCTGTTTATGGCGGCCATTGCCCCTGGCGTGATGATGGGCGCAACGCCTATGTTTACCTTGTGGTGGCCGGGCAGTCGCCTTAATTTACCCCCCCCCCAAAAAACAACGATGCAGGAAAACTGGGACTCTTTTGtcc > 2:731972/1‑139 (MQ=255) aaGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGtctc < 1:1114660/140‑1 (MQ=255) cTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCgg < 2:773787/140‑1 (MQ=255) tttATGGCGGGCATTTCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTTATTTTCCCCCCCAGCAAAAAACAACGATGCAGGAAAACTGGGACTCTTTTTTCTCCGGTAt > 2:951728/1‑140 (MQ=255) tttATGGCGGGCATTGCCCCTGGGATGATGATGGGGGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTAt > 1:432433/1‑140 (MQ=255) tttATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGGGGGAGGCCAGTCGCCTTAATTTACCCCCCCCGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTAt > 2:581293/1‑140 (MQ=255) ttATGGCGTTCATTGCCCCGGGCATGATGAGGGGCGCAACGCTGATGCTTACCTGGTGGGGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTCTTGTCTCCGGTATc < 2:1245755/140‑1 (MQ=255) cGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg < 2:956554/140‑1 (MQ=255) cGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGGGGGAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg > 1:321148/1‑140 (MQ=255) ggcttGCCCCTCGCATGATGATGGGCGCAACGCTTATGCTTAACTTGTGGGGGGAGGCCAGTGGCCTTAATTTACCCCGCCCGCAAAAAACAACGAGGGAGGGAAACCTGCCCTCTTTTTTCTCCCGGATATGGgcggcg > 2:758481/4‑137 (MQ=255) ggaTTGCCCCCTGCATAGTTATGGGCGCAACGCTGATTTTTAACTGGTGGTGGCAGGCCAGTCGCCCTGATTTACCCCGCCAGCAAAAAGGAACGATGCAGGAAATCTTGCACTCTTTTTTCTCCGGTGTCTGGGGGC‑tt > 2:1160276/3‑139 (MQ=255) gCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGGGGGAGGCCCGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑Tg > 2:1148813/1‑140 (MQ=255) cccTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTttcttc < 1:1645130/140‑1 (MQ=255) cggggttgatgaggGGCGCAACGCTGAGGCTTCCCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCa < 1:731972/134‑1 (MQ=255) tGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAg < 1:971870/140‑1 (MQ=255) tGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAg > 2:432263/1‑140 (MQ=255) tGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAg < 1:177304/140‑1 (MQ=255) ggCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGt < 1:1283887/140‑1 (MQ=255) gatgGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAAGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCatta < 2:1546993/140‑1 (MQ=255) gatgGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCatta > 1:932721/1‑140 (MQ=255) gggCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTg > 1:231738/1‑140 (MQ=255) gggCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTg > 2:608262/1‑140 (MQ=255) gggCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTg > 2:1625019/1‑140 (MQ=255) ggCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTgg > 2:251976/1‑140 (MQ=255) ggCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTgg > 1:388517/1‑140 (MQ=255) gcgcAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGc < 1:760333/140‑1 (MQ=255) gcgcAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGc < 1:251976/140‑1 (MQ=255) cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑gg‑g > 2:1618624/1‑140 (MQ=255) cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑gg‑g > 1:738986/1‑140 (MQ=255) cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑gg‑g > 1:32144/1‑140 (MQ=255) cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCCTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑gg‑g > 1:607452/1‑140 (MQ=255) cGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑Gttt > 2:896890/1‑140 (MQ=255) aTGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTc > 2:230557/1‑140 (MQ=255) cTTCCCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCgg < 1:310798/140‑1 (MQ=255) cTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTTCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCgg < 2:1408650/140‑1 (MQ=255) ttcccTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGc < 1:1575991/137‑1 (MQ=255) ttACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGc < 1:1056382/140‑1 (MQ=255) ttACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGc < 1:1625019/140‑1 (MQ=255) ttACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGc < 2:321148/140‑1 (MQ=255) ttACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGc < 1:103127/140‑1 (MQ=255) tACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑Gtt < 1:1503703/129‑1 (MQ=255) tACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑Gtt > 2:1503703/1‑129 (MQ=255) tACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCCGcc > 2:1523214/1‑140 (MQ=255) aCCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GGCGTTCcgccccgccc > 2:521431/1‑140 (MQ=255) tggtggtggCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGtt < 1:297749/140‑1 (MQ=255) gtggtggCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GGTTTGCTCCGGCCTGtttt > 1:1614599/1‑139 (MQ=255) ggCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTTGCTCCGGCCCGTTTAccccc > 2:1435444/1‑139 (MQ=255) ggCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCt > 1:1564278/1‑140 (MQ=255) gCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTa > 1:1664064/1‑140 (MQ=255) aGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTAcc < 1:521431/140‑1 (MQ=255) aGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTAcc < 2:1664064/140‑1 (MQ=255) aGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTAcc < 1:608262/140‑1 (MQ=255) gCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GGTTTGCTCCGGCCCGTTTTCCCCTAcccc > 2:1632172/1‑138 (MQ=255) gCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GGTTTGCTCCCGCCTGTTTTTCCCTAccca > 2:23145/1‑138 (MQ=255) cTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGc < 1:338732/140‑1 (MQ=255) tAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCTCTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCg < 2:673945/140‑1 (MQ=255) tAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCg < 2:432433/140‑1 (MQ=255) tAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCg < 2:738986/140‑1 (MQ=255) tAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCg < 2:32144/140‑1 (MQ=255) tAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCg < 1:1148813/140‑1 (MQ=255) tAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GGTTCGCTCCCGCCTTTTTACCCCCACCGAAACCGGGGGCg > 2:1707331/1‑140 (MQ=255) tAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCT‑GGCGCTTGTTTCTT‑CAGTCCTTATTTATGGCGGG‑GTTTTCCCCCGGCCGTTTTTCCCCTCCCCAACCCGGGGCCg > 2:551567/1‑140 (MQ=255) | TTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGC‑TGTTTCTTCCAGTCATCATTATTGGC‑GG‑GTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCG > NC_000913/3745259‑3745530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |