BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,521,136	C→A	intergenic (+10/‑37)	valX → / → valY	tRNA‑Val/tRNA‑Val

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,521,136	0	C	A	100.0%	299.3 / NA	92	intergenic (+10/‑37)	valX/valY	tRNA‑Val/tRNA‑Val
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (46/46); total (46/46)

Only 100 of 107 total aligned reads displayed.

ACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAG  >  NC_000913/2520999‑2521267

acccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAg                                                                                                                                   >  2:549693/1‑140 (MQ=255)

acccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAg                                                                                                                                   >  1:605027/1‑140 (MQ=255)

acccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAg                                                                                                                                   >  1:148608/1‑140 (MQ=255)

  ccaccaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCt                                                                                                                                 >  1:59118/1‑140 (MQ=255)

    accaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTaa                                                                                                                               >  1:673643/1‑140 (MQ=255)

      caACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAt                                                                                                                             >  1:829630/1‑140 (MQ=255)

      caACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAt                                                                                                                             >  1:401915/1‑140 (MQ=255)

        actactTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAttt                                                                                                                           >  1:310134/1‑140 (MQ=255)

               tttGTAGTCTCCCCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaa                                                                                                                    <  1:805345/138‑1 (MQ=255)

               tATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaa                                                                                                                    >  1:1614102/1‑140 (MQ=255)

                aTGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaa                                                                                                                   >  1:1143139/1‑140 (MQ=255)

                aTGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaa                                                                                                                   >  2:175441/1‑140 (MQ=255)

                aTGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaa                                                                                                                   >  2:1393907/1‑140 (MQ=255)

                aTGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaa                                                                                                                    <  2:228200/139‑1 (MQ=255)

                aTGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaa                                                                                                                    >  1:228200/1‑139 (MQ=255)

                 tGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaaa                                                                                                                  >  1:1545322/1‑140 (MQ=255)

                  gTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaaaa                                                                                                                 <  2:605027/140‑1 (MQ=255)

                    aGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCGATCTAAAATTTTTGTaaaaagt                                                                                                               >  2:637568/1‑138 (MQ=18)

                     gTCTCC‑CCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             <  1:223088/140‑1 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTCAATTTTTTTTgaaaaattg                                                                                                             >  2:717805/1‑136 (MQ=18)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaaa                                                                                                                  <  2:1654755/135‑1 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaaa                                                                                                                  >  1:1654755/1‑135 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             <  2:68601/140‑1 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             >  1:422401/1‑140 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             <  2:1545322/140‑1 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             >  1:773231/1‑140 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             >  1:960496/1‑140 (MQ=255)

                      tctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAAtgtg                                                                                                             <  2:1143139/140‑1 (MQ=255)

                       ctcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGa                                                                                                            >  1:302808/1‑140 (MQ=255)

                        tcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCGAGCTAAAATTTTTGTAAAAATGTGaa                                                                                                           >  2:30577/1‑140 (MQ=255)

                        tcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAATTTTTGTGAAAAGGTGaa                                                                                                           >  2:742712/1‑140 (MQ=18)

                          cgccgTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGCCGGCGGTTCGGTGCCGTTATCCCCCACCACCTTCTCGCAAGCTAAATTTCTTGTAAAAATATGAAga                                                                                                         >  2:1270663/1‑139 (MQ=21)

                           gccgTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaaa                                                                                                                  <  1:937800/130‑1 (MQ=255)

                           gccgTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaaaa                                                                                                                  >  2:937800/1‑130 (MQ=255)

                           gccgTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTa                                                                                                        >  2:1400726/1‑140 (MQ=255)

                               tgtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaa                                                                                                                    >  2:1661055/1‑124 (MQ=255)

                               tgtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTaa                                                                                                                    <  1:1661055/124‑1 (MQ=255)

                               tgtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGa                                                                                                    >  2:1710762/1‑140 (MQ=255)

                                  aGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGt                                                                                                 <  1:1710762/140‑1 (MQ=255)

                                    cAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTgg                                                                                               <  1:550828/140‑1 (MQ=255)

                                    cAAGAAATTGAAGAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTgg                                                                                               <  2:1571462/140‑1 (MQ=255)

                                       gAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTTTTGTAAAAATTACAAATACCGAAGTggggg                                                                                            >  2:1536213/1‑138 (MQ=18)

                                         aaTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGAt                                                                                          <  1:643614/140‑1 (MQ=255)

                                         aaTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAATTCTTGTAAAAATGTGAAGTACCGAAGAGGGGGAt                                                                                          >  1:1550227/1‑140 (MQ=255)

                                         aaTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCGATAATTTTTGTAAAAATGTGAAATTCCGAAAAGGGGGAt                                                                                          >  2:1528625/1‑140 (MQ=17)

                                          aTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGGGAtt                                                                                         >  1:34226/1‑140 (MQ=255)

                                           ttGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGATAAATTTTTTGTAAACATGTGAAGTATCGAAGAGTGTGACTa                                                                                        >  2:952242/1‑140 (MQ=18)

                                           ttGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGGGATTa                                                                                        >  1:1659058/1‑140 (MQ=255)

                                            tGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAg                                                                                       >  1:306766/1‑140 (MQ=255)

                                             gagaATTGGGTGATTAGCTCAGCGGGTAGAGGACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGc                                                                                      <  2:584876/140‑1 (MQ=21)

                                             gagaAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGc                                                                                      <  2:1515818/140‑1 (MQ=255)

                                             gagaAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGc                                                                                      <  2:302808/140‑1 (MQ=255)

                                                  gTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGc                                                                                 <  1:722357/140‑1 (MQ=255)

                                                   tGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCt                                                                                >  1:1302495/1‑140 (MQ=255)

                                                           tAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGc                                                                        <  1:1393907/140‑1 (MQ=255)

                                                           tAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGc                                                                        <  1:276344/140‑1 (MQ=255)

                                                            aGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCa                                                                       <  2:1614102/140‑1 (MQ=255)

                                                            aGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCa                                                                       <  2:1302495/140‑1 (MQ=255)

                                                             gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                      <  1:189110/140‑1 (MQ=255)

                                                             gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                      <  2:401915/140‑1 (MQ=255)

                                                             gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                      <  2:306766/140‑1 (MQ=255)

                                                             gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAc                                                                      <  2:673643/140‑1 (MQ=255)

                                                              cTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAcc                                                                     <  1:1400726/140‑1 (MQ=255)

                                                               tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                                                                    <  1:175441/140‑1 (MQ=255)

                                                               tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                                                                    <  1:1270663/140‑1 (MQ=255)

                                                                 aGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCtgc                                                                  <  2:59118/140‑3 (MQ=255)

                                                                   cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTTTTTTAAAAATGTTCAGTACCAAAGTGGGCGATTAGGTCAGCTGGGCGAGCACCTCCCt                                                                >  2:1264752/1‑140 (MQ=21)

                                                                   cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                                                                    <  1:683137/136‑1 (MQ=255)

                                                                   cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                                                                    >  2:683137/1‑136 (MQ=255)

                                                                      ggAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                                                                    <  2:1316579/133‑1 (MQ=255)

                                                                      ggAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                                                                    >  1:1316579/1‑133 (MQ=255)

                                                                      ggAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAACTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTAc                                                             >  1:1367716/1‑140 (MQ=255)

                                                                            cACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAATTCTTGTAAAAAAGTGAATTATCGAAGAGGGGGAGTAGCTTAGCTGGGGGAGCACCTCCCCTACAaggag                                                       >  2:1235277/1‑140 (MQ=21)

                                                                               cTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTTCCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAgggg                                                    <  2:829630/140‑1 (MQ=255)

                                                                                 cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGt                                                  <  2:148608/140‑1 (MQ=255)

                                                                                 cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGGGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGt                                                  >  1:230769/1‑140 (MQ=255)

                                                                                    ttACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTcgg                                               <  1:1696590/140‑1 (MQ=255)

                                                                                         aggaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTcggcgggt                                          >  1:775710/1‑138 (MQ=255)

                                                                                         aggaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGtt                                          <  1:549693/140‑1 (MQ=255)

                                                                                          ggaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTc                                         >  1:121913/1‑140 (MQ=255)

                                                                                            aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGt                                           <  2:469773/136‑1 (MQ=255)

                                                                                            aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGt                                           >  1:469773/1‑136 (MQ=255)

                                                                                            aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGa                                       >  1:601183/1‑140 (MQ=255)

                                                                                            aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGa                                       >  1:1414257/1‑140 (MQ=255)

                                                                                            aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAATGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGa                                       >  1:1317295/1‑140 (MQ=255)

                                                                                              ggggTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAAATTCTTGTAAAAATGTGAATTTCCGAAGTGGGGGTTTAGCTTAGCTGGGAGGGCACCTCCCTTACAACGAGGGGGCCGGCGGtggggtt                                     >  2:1556708/1‑134 (MQ=25)

                                                                                               gggTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTATCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATcc                                    <  2:1367716/140‑1 (MQ=255)

                                                                                                ggTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATccc                                   >  2:1338181/1‑140 (MQ=255)

                                                                                                  tCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGt                                 <  2:121913/140‑1 (MQ=255)

                                                                                                  tCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGt                                 >  1:1474275/1‑140 (MQ=255)

                                                                                                    ggcggTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtca                               <  1:1338181/140‑1 (MQ=255)

                                                                                                      cggTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtcatc                             >  1:1329560/1‑140 (MQ=255)

                                                                                                        gTTCGATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcac                           >  2:872270/1‑140 (MQ=255)

                                                                                                            gATCCCGTCATCACCCACCACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcacccac                       <  1:872270/140‑1 (MQ=255)

                                                                                                                       cacccaccACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTc            >  1:448301/1‑140 (MQ=255)

                                                                                                                        acccaccACTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCg           <  1:1536213/140‑1 (MQ=255)

                                                                                                                              cacTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCt     >  2:166996/1‑140 (MQ=255)

                                                                                                                               acTTTCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCAGGTCGTTAGCTc    <  1:1264752/140‑1 (MQ=255)

                                                                                                                                gtttCTCGCAAGCTAAATTCCGTGTAAAAATGTGAAGTGCCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCa   <  1:935959/139‑1 (MQ=255)

                                                                                                                                 tttCTCGCAAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAg  >  2:953252/1‑140 (MQ=255)

ACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAG  >  NC_000913/2520999‑2521267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`