BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,810,995	T→A	Q53L (CAG→CTG)	mutM ←	DNA‑formamidopyrimidine glycosylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,810,995	0	T	A	100.0%	457.9 / NA	127	Q53L (CAG→CTG)	mutM	DNA‑formamidopyrimidine glycosylase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (71/56); total (71/56)

Only 100 of 131 total aligned reads displayed.

CTCATCACCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCTGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTC  >  NC_000913/3810860‑3811131

cTCATCACCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCAc                                                                                                                                      >  2:1333976/1‑140 (MQ=255)

 tcatcaCCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACg                                                                                                                                     <  1:1623472/140‑1 (MQ=255)

   atcaCCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCt                                                                                                                                   <  2:292482/140‑1 (MQ=255)

   atcaCCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCt                                                                                                                                   <  2:1148561/140‑1 (MQ=255)

    tcaCCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTa                                                                                                                                  >  1:183972/1‑140 (MQ=255)

    tcaCCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTa                                                                                                                                  >  2:209355/1‑140 (MQ=255)

          aaTCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACt                                                                                                                            >  2:979496/1‑140 (MQ=255)

          aaTCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACt                                                                                                                            >  1:1712818/1‑140 (MQ=255)

          aaTCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTACCCCGCCGCAGCACTCTAAGCACt                                                                                                                            >  2:436358/1‑140 (MQ=255)

                 aTGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACtggttggt                                                                                                                     <  2:392068/140‑1 (MQ=255)

                       aTGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTa                                                                                                               >  1:1554367/1‑140 (MQ=255)

                       aTGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTa                                                                                                               <  1:796111/140‑1 (MQ=255)

                        tGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTa                                                                                                               <  2:712094/139‑1 (MQ=255)

                        tGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTa                                                                                                               >  1:712094/1‑139 (MQ=255)

                          cTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAAc                                                                                                            >  2:732764/1‑140 (MQ=255)

                            tttCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACgg                                                                                                          <  2:1350100/140‑1 (MQ=255)

                             ttCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGt                                                                                                         >  2:1404250/1‑140 (MQ=255)

                              tCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTa                                                                                                        >  2:124658/1‑140 (MQ=255)

                               cAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAg                                                                                                       >  2:684634/1‑140 (MQ=255)

                               cAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAg                                                                                                       >  2:880817/1‑140 (MQ=255)

                               cAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAg                                                                                                       >  1:549849/1‑140 (MQ=255)

                                 gggggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAt                                                                                                     <  1:1268531/140‑1 (MQ=255)

                                 gggggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAt                                                                                                     <  1:209355/140‑1 (MQ=255)

                                  ggggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtc                                                                                                    <  2:1554367/140‑1 (MQ=255)

                                   gggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtct                                                                                                   >  2:128217/1‑140 (MQ=255)

                                   gggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtct                                                                                                   >  2:964354/1‑140 (MQ=255)

                                   gggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtct                                                                                                   >  1:544358/1‑140 (MQ=255)

                                   gggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtc                                                                                                    >  2:616228/1‑139 (MQ=255)

                                   gggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtc                                                                                                    <  1:616228/139‑1 (MQ=255)

                                    ggAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGAtctc                                                                                                  >  1:190907/1‑140 (MQ=255)

                                     gAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATctct                                                                                                 >  2:345676/1‑140 (MQ=255)

                                     gAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATctct                                                                                                 >  2:949141/1‑140 (MQ=255)

                                     gAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATctct                                                                                                 >  2:959209/1‑140 (MQ=255)

                                      aaGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACACCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCT‑CAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCtcttc                                                                                               <  1:851346/140‑1 (MQ=255)

                                       aGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCtcttc                                                                                               <  1:880817/140‑1 (MQ=255)

                                       aGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCtcttc                                                                                               >  1:1143438/1‑140 (MQ=255)

                                            ttctGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGaaa                                                                                          >  2:470700/1‑140 (MQ=255)

                                             tctGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAAc                                                                                         >  2:700195/1‑140 (MQ=255)

                                             tctGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAAc                                                                                         >  2:1581927/1‑140 (MQ=255)

                                                 gAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGc                                                                                     <  1:1292472/140‑1 (MQ=255)

                                                   aGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCa                                                                                   <  1:1520513/140‑1 (MQ=255)

                                                   aGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCa                                                                                   >  1:70264/1‑140 (MQ=255)

                                                   aGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCa                                                                                   <  1:1042565/140‑1 (MQ=255)

                                                   aGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCa                                                                                   >  1:777792/1‑140 (MQ=255)

                                                    ggATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAg                                                                                  <  2:1206312/140‑1 (MQ=255)

                                                      aTGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAgcg                                                                                >  1:933560/1‑140 (MQ=255)

                                                           cAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGc                                                                           <  2:190057/140‑1 (MQ=255)

                                                                tGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCg                                                                      <  1:1333976/140‑1 (MQ=255)

                                                                tGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCg                                                                      <  1:345676/140‑1 (MQ=255)

                                                                     gACATCCCTAAATAAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTgcg                                                                 <  1:1023862/140‑1 (MQ=255)

                                                                       cATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGca                                                               <  1:124658/140‑1 (MQ=255)

                                                                       cATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGca                                                               <  2:190907/140‑1 (MQ=255)

                                                                       cATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGca                                                               <  2:549849/140‑1 (MQ=255)

                                                                        aTCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGcac                                                              >  2:285728/1‑140 (MQ=255)

                                                                         tCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGAAAGCGTCCGTTGCGcacc                                                             <  1:1550138/140‑1 (MQ=255)

                                                                          cccTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGcacca                                                            <  1:1187038/140‑1 (MQ=255)

                                                                            cTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACt                                                          <  1:1369186/140‑1 (MQ=255)

                                                                               aatgaatgATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCa                                                       <  1:816385/140‑1 (MQ=255)

                                                                               aatgaatgATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCa                                                       <  2:933560/140‑1 (MQ=255)

                                                                                     tgaTAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACt                                                          <  2:1517552/131‑1 (MQ=255)

                                                                                     tgaTAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACt                                                          >  1:1517552/1‑131 (MQ=255)

                                                                                     tgaTAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATgaaga                                                 <  1:979496/140‑1 (MQ=255)

                                                                                     tgaTAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATgaaga                                                 >  1:1078198/1‑140 (MQ=255)

                                                                                      gaTAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATgaagaa                                                >  2:78864/1‑140 (MQ=255)

                                                                                          aTCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGt                                            <  1:342873/140‑1 (MQ=255)

                                                                                          aTCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGt                                            <  2:330529/140‑1 (MQ=255)

                                                                                           tCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGtt                                           >  1:1646213/1‑140 (MQ=255)

                                                                                           tCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGtt                                           >  1:245796/1‑140 (MQ=255)

                                                                                            ccAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTg                                          >  2:527433/1‑140 (MQ=255)

                                                                                            ccAGCCATCAGCCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCGCTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTg                                          <  1:1269290/140‑1 (MQ=255)

                                                                                             cAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGc                                         >  2:389319/1‑140 (MQ=255)

                                                                                                cccTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCAcc                                      >  2:370391/1‑140 (MQ=255)

                                                                                                cccTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCAcc                                      >  1:713950/1‑140 (MQ=255)

                                                                                                cccTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCAcc                                      >  1:59058/1‑140 (MQ=255)

                                                                                                cccTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCAcc                                      >  1:399254/1‑140 (MQ=255)

                                                                                                 ccTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCa                                     >  2:1642442/1‑140 (MQ=255)

                                                                                                 ccTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCa                                     >  1:1017793/1‑140 (MQ=255)

                                                                                                    cAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACg                                  <  1:684634/140‑1 (MQ=255)

                                                                                                      ggCAGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACgag                                >  2:1454251/1‑140 (MQ=255)

                                                                                                         aGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATg                             <  1:464319/140‑1 (MQ=255)

                                                                                                         aGCTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATg                             <  1:1642442/140‑1 (MQ=255)

                                                                                                           cTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCg                           >  1:436070/1‑140 (MQ=255)

                                                                                                           cTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCg                           >  1:1658789/1‑140 (MQ=255)

                                                                                                           cTCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCg                           >  1:1597487/1‑140 (MQ=255)

                                                                                                            tCCAGCAGCAGATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGGCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCgg                          >  1:441730/1‑140 (MQ=255)

                                                                                                              cagcagcagATATTTACCCCGCAGCTGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGtt                        >  2:197965/1‑140 (MQ=255)

                                                                                                                  agcagATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTAt                    <  1:1632454/140‑1 (MQ=255)

                                                                                                                     agATATTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGcc                 >  1:26152/1‑140 (MQ=255)

                                                                                                                      gATATTTAACCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCcg                >  1:1013637/1‑140 (MQ=255)

                                                                                                                        tatTTAGCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCcgcg              <  1:732764/140‑1 (MQ=255)

                                                                                                                              gCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCt        <  2:436070/140‑1 (MQ=255)

                                                                                                                              gCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCt        <  2:1196378/140‑1 (MQ=255)

                                                                                                                              gCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCt        >  1:335745/1‑140 (MQ=255)

                                                                                                                              gCCCGCCGCAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCt        >  2:1639670/1‑140 (MQ=255)

                                                                                                                                 cgccgcAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGt     >  2:1381175/1‑140 (MQ=255)

                                                                                                                                 cgccgcAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGt     >  2:1073746/1‑140 (MQ=255)

                                                                                                                                  gccgcAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGtt    >  2:1386783/1‑140 (MQ=255)

                                                                                                                                  gccgcAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGtt    >  1:1586068/1‑140 (MQ=255)

                                                                                                                                   ccgcAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGttt   <  2:544358/140‑1 (MQ=255)

                                                                                                                                   ccgcAGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGttt   <  2:1078198/140‑1 (MQ=255)

CTCATCACCAAATCCACATGGTCATGCTTTTCAGGGGGAAGTTCTTCTGGAAGGATGCGCAGGCTGCCAGACATCCCTAAATGAATGATAATCCAGCCCTCAGGCAGCTCCAGCAGCAGATATTTAGCCCGCCGCTGCACGCTAAGCACTGGTTGGTCGCTTAAACGGTAGATCTCTTCTGAAACCGGCCAGCGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTC  >  NC_000913/3810860‑3811131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`