Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,408,555	G→T	L634L (CTG→CTT)	rnr →	RNase R

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,408,555	0	G	T	100.0%	309.5 / NA	86	L634L (CTG→CTT)	rnr	RNase R
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (36/50);  total (36/50)

AGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTGAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATG  >  NC_000913/4408422‑4408691                                                                                                                                      |                                                                                                                                         aGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAgtgt                                                                                                                                    <  1:95871/140‑1 (MQ=255) aGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAgtgt                                                                                                                                    <  2:593013/140‑1 (MQ=255) aGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAgtgt                                                                                                                                    >  2:909315/1‑140 (MQ=255)   gggCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGa                                                                                                                                  >  2:341941/1‑140 (MQ=255)     gCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACt                                                                                                                                <  1:298070/140‑1 (MQ=255)      cATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACtt                                                                                                                               <  1:1558018/140‑1 (MQ=255)             gCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTc                                                                                                                        >  2:1124512/1‑140 (MQ=255)              caacaaCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCg                                                                                                                       <  2:1156650/140‑1 (MQ=255)               aaCACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGa                                                                                                                      >  2:313230/1‑140 (MQ=255)               aaCACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGa                                                                                                                      <  2:1525806/140‑1 (MQ=255)                acacCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGAc                                                                                                                     <  1:64396/140‑1 (MQ=255)                acacCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGAc                                                                                                                     <  1:313230/140‑1 (MQ=255)                acacCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGAc                                                                                                                     <  1:255375/140‑1 (MQ=255)                acacCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGAc                                                                                                                     <  1:1710748/140‑1 (MQ=255)                  cccacTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCa                                                                                                                   <  2:109997/139‑1 (MQ=255)                     acTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggt                                                                                                                <  1:376057/140‑1 (MQ=255)                      cTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggta                                                                                                               >  1:125752/1‑140 (MQ=255)                      cTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggta                                                                                                               >  2:1052342/1‑140 (MQ=255)                      cTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggta                                                                                                               >  1:669838/1‑140 (MQ=255)                      cTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggta                                                                                                               >  2:219831/1‑140 (MQ=255)                      cTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGCCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggta                                                                                                               >  1:594569/1‑140 (MQ=255)                      cTGAAACCGGCGGCTAACAATATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggta                                                                                                               >  2:212355/1‑140 (MQ=255)                         aaaCCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCaggtaggt                                                                                                            <  1:660972/140‑1 (MQ=255)                          aaCCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAggtaggta                                                                                                           <  1:461883/140‑1 (MQ=255)                          aaCCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAggtaggta                                                                                                           <  1:650640/140‑1 (MQ=255)                            ccGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAAc                                                                                                         <  2:1709472/140‑1 (MQ=255)                            ccGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAAc                                                                                                         <  1:1547983/140‑1 (MQ=255)                            ccGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAAc                                                                                                         <  2:125752/140‑1 (MQ=255)                            ccGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAAc                                                                                                         <  2:798299/140‑1 (MQ=255)                              ggcggcTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGt                                                                                                       >  1:1645874/1‑140 (MQ=255)                                cggcTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCt                                                                                                     >  2:964023/1‑140 (MQ=255)                                   cTACCATTATTCGATGGAAGAGATTCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTa                                                                                                  >  2:1319506/1‑140 (MQ=255)                                     aCCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTaaa                                                                                                <  2:1431187/140‑1 (MQ=255)                                      ccATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAg                                                                                               <  2:1170527/140‑1 (MQ=255)                                      ccATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAg                                                                                               <  1:341941/140‑1 (MQ=255)                                      ccATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAg                                                                                               <  2:398161/140‑1 (MQ=255)                                          tattCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGt                                                                                           <  1:219831/140‑1 (MQ=255)                                          tattCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGt                                                                                           <  1:1497612/140‑1 (MQ=255)                                           attCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTa                                                                                          <  1:119359/140‑1 (MQ=255)                                             tCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAAt                                                                                        >  1:968436/1‑140 (MQ=255)                                             tCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAAt                                                                                        >  1:65949/1‑140 (MQ=255)                                              cGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAAtt                                                                                       >  1:98592/1‑140 (MQ=255)                                                      gagaTGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTaa                                                                                                 <  2:1654505/122‑1 (MQ=255)                                                      gagaTGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTaa                                                                                                 >  1:1654505/1‑122 (MQ=255)                                                      gagaTGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGt                                                                               >  2:857277/1‑140 (MQ=255)                                                        gaTGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCa                                                                             <  1:212355/140‑1 (MQ=255)                                                        gaTGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCa                                                                             <  1:1124512/140‑1 (MQ=255)                                                        gaTGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCa                                                                             <  2:669838/140‑1 (MQ=255)                                                             tgcAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGACTTAAGTGTGACTTCATGCTCGGCCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACtggc                                                                        <  1:1416443/140‑1 (MQ=255)                                                              gcAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACtggct                                                                       >  2:1208913/1‑140 (MQ=255)                                                                 aCTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACtggctttg                                                                    <  2:968436/140‑1 (MQ=255)                                                                  cTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACtggctttgg                                                                   >  2:1442793/1‑140 (MQ=255)                                                                     ggTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACtggctttggctt                                                                >  2:152191/1‑140 (MQ=255)                                                                     ggTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACtggctttggctt                                                                <  1:931220/140‑1 (MQ=255)                                                                       tCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGcttct                                                              >  1:986399/1‑140 (MQ=255)                                                                       tCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGcttct                                                              >  1:192684/1‑140 (MQ=255)                                                                         aGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCttcttc                                                            >  2:377716/1‑140 (MQ=255)                                                                           cACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgt                                                          >  2:1708875/1‑140 (MQ=255)                                                                              tGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccg                                                       <  2:1645874/140‑1 (MQ=255)                                                                                ttCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccgtc                                                     >  2:1357045/1‑140 (MQ=255)                                                                                ttCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccgtc                                                     >  2:529444/1‑140 (MQ=255)                                                                                ttCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccgtc                                                     >  2:1613105/1‑140 (MQ=255)                                                                                ttCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccgtc                                                     >  2:1028759/1‑140 (MQ=255)                                                                                ttCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccgtc                                                     >  1:353049/1‑140 (MQ=255)                                                                                ttCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTcgtccgtc                                                     >  2:264800/1‑140 (MQ=255)                                                                                   gATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGCCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTgg                                                  <  2:594569/140‑1 (MQ=255)                                                                                        cGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGgacgac                                             <  1:1700985/140‑1 (MQ=255)                                                                                        cGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGgacgac                                             <  2:809569/140‑1 (MQ=255)                                                                                          gAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACtt                                           >  2:500719/1‑140 (MQ=255)                                                                                           aaCGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTg                                          <  1:475029/140‑1 (MQ=255)                                                                                             cgtcgtGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGtt                                        <  1:909315/140‑1 (MQ=255)                                                                                             cgtcgtGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGtt                                        <  2:593976/140‑1 (MQ=255)                                                                                                  tGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTg                                   <  1:310829/140‑1 (MQ=255)                                                                                                  tGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTg                                   <  1:1052342/140‑1 (MQ=255)                                                                                                  tGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTg                                   >  2:665573/1‑140 (MQ=255)                                                                                                        cgaAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGAtggtc                             <  1:964023/140‑1 (MQ=255)                                                                                                        cgaAGCAACGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGACTTTAAAGGCGAAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTAGACGACTTGTTCATTGAtggtc                             <  2:1574989/140‑1 (MQ=255)                                                                                                               aCGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCa                      <  1:1708875/140‑1 (MQ=255)                                                                                                               aCGCGCGATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCa                      <  1:857277/140‑1 (MQ=255)                                                                                                                  cgcgATGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGt                   >  1:663629/1‑140 (MQ=255)                                                                                                                      aTGTGGCTGACTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTctct               <  1:1028759/140‑1 (MQ=255)                                                                                                                               aCTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGAc      >  2:60355/1‑140 (MQ=255)                                                                                                                               aCTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGAc      <  1:1489836/140‑1 (MQ=255)                                                                                                                                cTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACa     <  2:192684/140‑1 (MQ=255)                                                                                                                                cTGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACa     <  2:986399/140‑1 (MQ=255)                                                                                                                                 tGGCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAGCGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACaa    >  1:968578/1‑140 (MQ=255)                                                                                                                                  ggCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAAt   <  1:665573/140‑1 (MQ=255)                                                                                                                                   gCTTAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATg  >  1:1009766/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                         AGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTGAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATG  >  NC_000913/4408422‑4408691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑