Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,829,173	C→A	L43M (CTG→ATG)	srlR →	DNA‑binding transcriptional repressor SrlR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,829,173	0	C	A	100.0%	329.7 / NA	92	L43M (CTG→ATG)	srlR	DNA‑binding transcriptional repressor SrlR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (42/50);  total (42/50)

TAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGTT  >  NC_000913/2829036‑2829308                                                                                                                                          |                                                                                                                                        tAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATg                                                                                                                                       >  1:826422/1‑140 (MQ=255)    tCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGaa                                                                                                                                    >  2:964376/1‑140 (MQ=255)    tCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGaa                                                                                                                                    <  1:1495760/140‑1 (MQ=255)          ccATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGcc                                                                                                                              >  1:808846/1‑140 (MQ=255)             tGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGa                                                                                                                           >  1:37092/1‑140 (MQ=255)             tGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGa                                                                                                                           <  2:1573068/140‑1 (MQ=255)                aaCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAAcc                                                                                                                        <  1:60855/140‑1 (MQ=255)                  ccTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGt                                                                                                                      >  2:51654/1‑140 (MQ=255)                  ccTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGt                                                                                                                      <  1:256676/140‑1 (MQ=255)                  ccTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGt                                                                                                                      <  1:964376/140‑1 (MQ=255)                    tCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCa                                                                                                                    >  2:300723/1‑140 (MQ=255)                      gtcagcgtcagGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCAtt                                                                                                                  >  2:1279501/1‑140 (MQ=255)                       tcagcgtcagGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTc                                                                                                                 <  2:1428971/140‑1 (MQ=255)                         agcgtcagGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGt                                                                                                               >  2:253438/1‑140 (MQ=255)                         agcgtcagGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGt                                                                                                               <  1:253438/140‑1 (MQ=255)                              cagGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTa                                                                                                          <  1:1425855/140‑1 (MQ=255)                              cagGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTa                                                                                                          <  1:544217/140‑1 (MQ=255)                                 gccgccATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATgg                                                                                                       >  2:237697/1‑140 (MQ=255)                                 gccgccATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAAAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATgg                                                                                                       <  2:1251975/140‑1 (MQ=255)                                     ccATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGa                                                                                                   >  2:553329/1‑140 (MQ=255)                                      cATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAg                                                                                                  <  1:744632/140‑1 (MQ=255)                                      cATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAg                                                                                                  <  2:517066/140‑1 (MQ=255)                                      cATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAg                                                                                                  <  1:515828/140‑1 (MQ=255)                                      cATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAg                                                                                                  <  1:1690446/140‑1 (MQ=255)                                      cATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAg                                                                                                  <  2:462562/140‑1 (MQ=255)                                      cATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAg                                                                                                  <  1:553329/140‑1 (MQ=255)                                        ttCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgtg                                                                                                <  1:874860/140‑1 (MQ=255)                                        ttCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgtg                                                                                                <  1:734952/140‑1 (MQ=255)                                        ttCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgtg                                                                                                <  2:1658261/140‑1 (MQ=255)                                           tGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgtggtg                                                                                             <  1:1627695/140‑1 (MQ=255)                                            ggAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGgtgt                                                                                            <  1:514484/140‑1 (MQ=255)                                               gTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGa                                                                                         >  1:1438257/1‑140 (MQ=255)                                                tATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGaa                                                                                        >  1:907171/1‑140 (MQ=255)                                                 aTCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAAt                                                                                       <  1:78265/140‑1 (MQ=255)                                                  tCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATa                                                                                      >  2:1016309/1‑140 (MQ=255)                                                  tCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATa                                                                                      <  1:396126/140‑1 (MQ=255)                                                  tCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATa                                                                                      >  1:1682263/1‑140 (MQ=255)                                                  tCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATa                                                                                      >  1:1392718/1‑140 (MQ=255)                                                  tCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATa                                                                                      >  2:1597179/1‑140 (MQ=255)                                                   cTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATaa                                                                                     >  2:1039728/1‑140 (MQ=255)                                                          aGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGaa                                                                              >  2:1075014/1‑140 (MQ=255)                                                          aGCAGGGT‑AATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGGACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAat                                                                             >  1:1556479/1‑140 (MQ=255)                                                              gggTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAatccg                                                                          >  1:762345/1‑140 (MQ=255)                                                                gTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAatccgat                                                                        >  2:866943/1‑140 (MQ=255)                                                                gTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAatccgat                                                                        >  2:414688/1‑140 (MQ=255)                                                                 tAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAatccgatc                                                                       <  2:1272382/140‑1 (MQ=255)                                                                        tCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTAt                                                                <  2:645428/140‑1 (MQ=255)                                                                         cGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATc                                                               >  2:189913/1‑140 (MQ=255)                                                                         cGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAAATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATc                                                               >  2:626417/1‑140 (MQ=255)                                                                           gTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGa                                                             <  2:657167/140‑1 (MQ=255)                                                                            ttGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGAt                                                            <  2:415661/140‑1 (MQ=255)                                                                             tGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATc                                                           >  2:764199/1‑140 (MQ=255)                                                                                agaaTTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATa                                                        <  1:390865/140‑1 (MQ=255)                                                                                agaaTTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATa                                                        <  1:1279501/140‑1 (MQ=255)                                                                                  aaTTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCT‑GTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATaaaa                                                     <  1:34343/140‑1 (MQ=255)                                                                                   aTTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATaaaa                                                     <  1:261462/140‑1 (MQ=255)                                                                                    ttGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAac                                                    >  2:843190/1‑140 (MQ=255)                                                                                      ggCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAacac                                                  >  2:237257/1‑140 (MQ=255)                                                                                      ggCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAacac                                                  >  2:1055438/1‑140 (MQ=255)                                                                                      ggCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAacac                                                  >  2:290331/1‑140 (MQ=255)                                                                                      ggCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAacac                                                  >  1:79416/1‑140 (MQ=255)                                                                                       gcgcAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACt                                                 <  1:1591377/140‑1 (MQ=255)                                                                                           aaTACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtcatc                                             >  2:1619421/1‑140 (MQ=255)                                                                                            aTACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtcatca                                            <  1:764199/140‑1 (MQ=255)                                                                                              aCTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAac                                          <  1:189913/140‑1 (MQ=255)                                                                                              aCTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAac                                          <  1:237257/140‑1 (MQ=255)                                                                                                tttGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAacac                                        <  1:1616279/140‑1 (MQ=255)                                                                                                  tGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACAccc                                      <  1:1039728/140‑1 (MQ=255)                                                                                                  tGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACAccc                                      <  1:1297495/140‑1 (MQ=255)                                                                                                  tGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACAccc                                      >  1:372171/1‑140 (MQ=255)                                                                                                   gACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGGACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCca                                     <  2:1556479/140‑1 (MQ=255)                                                                                                   gACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCca                                     <  1:1597179/140‑1 (MQ=255)                                                                                                   gACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCca                                     <  1:51654/140‑1 (MQ=255)                                                                                                     caccacAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCcaca                                   <  1:1055438/140‑1 (MQ=255)                                                                                                       ccacAGGCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaag                                 >  2:1688406/1‑140 (MQ=255)                                                                                                             gCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAagag                           <  2:907171/140‑1 (MQ=255)                                                                                                             gCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAagag                           <  2:1634875/140‑1 (MQ=255)                                                                                                             gCACAACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAagag                           <  2:826422/140‑1 (MQ=255)                                                                                                                caACCATTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTg                        <  1:1016309/140‑1 (MQ=255)                                                                                                                     aTTCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGc                   >  2:829508/1‑140 (MQ=255)                                                                                                                      ttCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCa                  >  1:1475905/1‑140 (MQ=255)                                                                                                                       tCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg                 >  1:1513537/1‑140 (MQ=255)                                                                                                                       tCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg                 >  1:1305034/1‑140 (MQ=255)                                                                                                                       tCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg                 >  1:1382530/1‑140 (MQ=255)                                                                                                                       tCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg                 >  2:1266246/1‑140 (MQ=255)                                                                                                                       tCGCAAAGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg                 >  2:1663384/1‑140 (MQ=255)                                                                                                                           aaaGATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGc             <  1:1266246/140‑1 (MQ=255)                                                                                                                              gATCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGc          >  1:316628/1‑140 (MQ=255)                                                                                                                                tCTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCg        <  2:1682263/140‑1 (MQ=255)                                                                                                                                 cTGGTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGt       <  2:79416/140‑1 (MQ=255)                                                                                                                                    gTCATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAg    >  1:746574/1‑140 (MQ=255)                                                                                                                                      cATTATGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGCTAGtt  <  1:159689/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                        TAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGTT  >  NC_000913/2829036‑2829308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑