BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,480,318	A→G	T197A (ACT→GCT)	yjgN →	conserved inner membrane protein YjgN

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,480,318	0	A	G	100.0%	443.4 / NA	115	T197A (ACT→GCT)	yjgN	conserved inner membrane protein YjgN
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (64/51); total (64/51)

Only 100 of 116 total aligned reads displayed.

TTTTAATGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTACTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGCCTTTTCTCG  >  NC_000913/4480181‑4480453

ttttAATGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCt                                                                                                                                       <  1:985624/140‑1 (MQ=255)

  ttAATGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCttt                                                                                                                                     <  1:345274/140‑1 (MQ=255)

     aTGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTtata                                                                                                                                  <  2:38102/140‑1 (MQ=255)

     aTGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTtata                                                                                                                                  <  1:1529804/140‑1 (MQ=255)

     aTGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTtata                                                                                                                                  <  1:450706/140‑1 (MQ=255)

     aTGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTtata                                                                                                                                  <  2:1668732/140‑1 (MQ=255)

       ggCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTtatata                                                                                                                                <  1:124244/140‑1 (MQ=255)

       ggCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTtatata                                                                                                                                <  1:515205/140‑1 (MQ=255)

         ccATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGt                                                                                                                              >  2:1446095/1‑140 (MQ=255)

         ccATTGGGATGGGGACTGTTTTCCTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGt                                                                                                                              <  1:1151511/140‑1 (MQ=255)

            ttGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTg                                                                                                                           <  2:1547683/140‑1 (MQ=255)

              gggATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGt                                                                                                                         <  1:250441/140‑1 (MQ=255)

                gATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTaa                                                                                                                       <  2:1527766/140‑1 (MQ=255)

                   ggggACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGa                                                                                                                    >  1:1565567/1‑140 (MQ=255)

                    gggACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCttt                                                                                                                                     <  1:952160/122‑1 (MQ=255)

                    gggACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAg                                                                                                                   >  2:31753/1‑140 (MQ=255)

                     ggACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGt                                                                                                                  <  1:983355/140‑1 (MQ=255)

                      gACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTaa                                                                                                                       >  2:1028955/1‑134 (MQ=255)

                      gACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTaa                                                                                                                       <  1:1028955/134‑1 (MQ=255)

                      gACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGtt                                                                                                                 >  2:191754/1‑140 (MQ=255)

                      gACTGTTTCCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTaa                                                                                                                       >  2:1360727/1‑134 (MQ=255)

                      gACTGTTTCCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTaa                                                                                                                       <  1:1360727/134‑1 (MQ=255)

                          gTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTtct                                                                                                             >  1:1048329/1‑140 (MQ=255)

                           ttttCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTtctc                                                                                                            >  1:165366/1‑140 (MQ=255)

                           ttttCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTtctc                                                                                                            >  2:118361/1‑140 (MQ=255)

                            tttCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTctct                                                                                                           <  2:1565567/140‑1 (MQ=255)

                              tCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTgg                                                                                                         >  1:1107398/1‑140 (MQ=255)

                              tCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTgg                                                                                                         <  2:1513238/140‑1 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  2:1692767/1‑140 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  1:731363/1‑140 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  1:742221/1‑140 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  1:918193/1‑140 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  2:688940/1‑140 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  2:509339/1‑140 (MQ=255)

                                     ctcGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATa                                                                                                  >  1:375456/1‑140 (MQ=255)

                                         aCAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGa                                                                                                        <  1:1165858/130‑1 (MQ=255)

                                         aCAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAg                                                                                              <  2:1296372/140‑1 (MQ=255)

                                           aaaGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGtt                                                                                            <  2:1673882/140‑1 (MQ=255)

                                            aaGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGttt                                                                                           <  1:1692767/140‑1 (MQ=255)

                                              gATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCg                                                                                         <  1:1112442/140‑1 (MQ=255)

                                                         ccAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGt                                                                              >  2:1153028/1‑140 (MQ=255)

                                                           aaTAGTTTAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGttt                                                                            <  2:1130936/140‑1 (MQ=255)

                                                            aTAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTc                                                                           <  1:688940/140‑1 (MQ=255)

                                                             tAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCa                                                                          >  1:108218/1‑140 (MQ=255)

                                                               gTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAg                                                                        >  1:510548/1‑140 (MQ=255)

                                                                ttCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAgg                                                                       <  2:1324652/140‑1 (MQ=255)

                                                                  cAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTg                                                                     <  2:1107398/140‑1 (MQ=255)

                                                                     gtagtGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGaaa                                                                  <  1:1675562/140‑1 (MQ=255)

                                                                     gtagtGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGaaa                                                                  >  2:1480670/1‑140 (MQ=255)

                                                                       agtGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAAtt                                                                <  2:494598/140‑1 (MQ=255)

                                                                         tgtTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAg                                                              <  1:1446095/140‑1 (MQ=255)

                                                                          gtTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGa                                                             <  1:509339/140‑1 (MQ=255)

                                                                          gtTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGa                                                             >  1:560144/1‑140 (MQ=255)

                                                                           ttattaTATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCGTTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGAt                                                            >  2:285777/1‑140 (MQ=255)

                                                                             attatATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGAtac                                                          >  2:1470891/1‑140 (MQ=255)

                                                                             attatATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGAtac                                                          >  2:292181/1‑140 (MQ=255)

                                                                              ttatATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGAtact                                                         <  1:525293/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    >  2:1519684/1‑140 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:918193/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    >  2:1685444/1‑140 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  1:25664/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:353545/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  1:31753/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    >  2:772568/1‑140 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:883950/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:68458/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:560144/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:108218/140‑1 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    >  1:1006004/1‑140 (MQ=255)

                                                                                   tCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  1:319636/140‑1 (MQ=255)

                                                                                       tGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  1:1357804/136‑1 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    <  2:877205/135‑1 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTa                                                    >  1:877205/1‑135 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGta                                               <  1:1679098/140‑1 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGta                                               >  1:959749/1‑140 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGta                                               >  2:161072/1‑140 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGta                                               >  2:1620873/1‑140 (MQ=255)

                                                                                        ggTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGta                                               >  1:261056/1‑140 (MQ=255)

                                                                                         gTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGtat                                              >  1:1566733/1‑140 (MQ=255)

                                                                                           tcagATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATaa                                            >  1:1540568/4‑140 (MQ=255)

                                                                                           tCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATaa                                            >  2:1661216/1‑140 (MQ=255)

                                                                                               aTGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAata                                        >  1:630753/1‑140 (MQ=255)

                                                                                               aTGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAata                                        >  1:127788/1‑140 (MQ=255)

                                                                                                   cAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGcc                                    >  2:1077436/1‑140 (MQ=255)

                                                                                                           ggTATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGc                            >  2:1587436/1‑140 (MQ=255)

                                                                                                             tATTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCAt                          >  1:1349343/1‑140 (MQ=255)

                                                                                                              aTTGTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCAtt                         >  1:1055234/1‑140 (MQ=255)

                                                                                                                 gTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCAttttt                      >  2:48033/1‑140 (MQ=255)

                                                                                                                 gTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCAttttt                      >  2:1381643/1‑140 (MQ=255)

                                                                                                                 gTTTCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCAttttt                      >  2:918755/1‑140 (MQ=255)

                                                                                                                  tttCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTa                     <  1:1282806/140‑1 (MQ=255)

                                                                                                                   ttCCATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAg                    <  2:1349343/140‑1 (MQ=255)

                                                                                                                      cATTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCtt                 >  2:697810/1‑140 (MQ=255)

                                                                                                                       aTTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCttt                >  2:1322961/1‑140 (MQ=255)

                                                                                                                       aTTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCttt                >  2:1152233/1‑140 (MQ=255)

                                                                                                                       aTTGGTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCttt                >  1:987741/1‑140 (MQ=255)

                                                                                                                           gTATTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg            >  2:1236175/1‑140 (MQ=255)

                                                                                                                             aTTTTTAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGcc          <  1:695025/140‑1 (MQ=255)

                                                                                                                                 ttAATGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGCCtttt      <  2:1371170/140‑1 (MQ=255)

                                                                                                                                     tGGTGCTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGCCTTTTCTCg  <  1:1236175/140‑1 (MQ=255)

TTTTAATGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTACTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGCCTTTTCTCG  >  NC_000913/4480181‑4480453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`