Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	266,711	C→A	intergenic (‑158/+473)	yafY ← / ← yafZ	CP4‑6 prophage; inner membrane lipoprotein YafY/CP4‑6 prophage; conserved protein YafZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	266,711	0	C	A	100.0%	240.1 / NA	69	intergenic (‑158/+473)	yafY/yafZ	CP4‑6 prophage; inner membrane lipoprotein YafY/CP4‑6 prophage; conserved protein YafZ
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (33/36);  total (33/36)

AACCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGCCGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGC  >  NC_000913/266577‑266845                                                                                                                                       |                                                                                                                                       aaCCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCga                                                                                                                                   <  2:361730/140‑1 (MQ=255) aaCCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCga                                                                                                                                   <  2:1096245/140‑1 (MQ=255) aaCCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCga                                                                                                                                   <  1:215654/140‑1 (MQ=255) aaCCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCga                                                                                                                                   >  1:1613094/1‑140 (MQ=255)  aCCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCgag                                                                                                                                  >  2:637374/1‑140 (MQ=255)            cAAAGACATAAATGCCCACGAGAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGa                                                                                                                         <  2:951522/139‑1 (MQ=255)            cAAAGACATAAATGCCCACGAGAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGa                                                                                                                         >  1:951522/1‑139 (MQ=255)                gACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACAccc                                                                                                                    <  2:58253/140‑1 (MQ=255)                gACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACAccc                                                                                                                    <  1:1268038/140‑1 (MQ=255)                     aaaTGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGtt                                                                                                               <  1:1496614/140‑1 (MQ=255)                          cccACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGtt                                                                                                          <  2:398566/140‑1 (MQ=255)                          cccACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGtt                                                                                                          <  2:1296652/140‑1 (MQ=255)                          cccACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGtt                                                                                                          >  1:566837/1‑140 (MQ=255)                           ccACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTc                                                                                                         >  2:40387/1‑140 (MQ=255)                           ccACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACCGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTc                                                                                                         >  2:1031380/1‑140 (MQ=255)                             aCGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAg                                                                                                       >  2:668846/1‑140 (MQ=255)                                   aTACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACCGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAatgat                                                                                                 <  1:1031380/140‑1 (MQ=255)                                       ccACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacg                                                                                             <  2:1583193/140‑1 (MQ=255)                                         aCCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacgat                                                                                           >  2:1021195/1‑140 (MQ=255)                                         aCCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacgat                                                                                           <  1:970765/140‑1 (MQ=255)                                         aCCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacgat                                                                                           <  2:494207/140‑1 (MQ=255)                                         aCCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacgat                                                                                           >  2:741441/1‑140 (MQ=255)                                           cGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacgatga                                                                                         >  2:1170603/1‑140 (MQ=255)                                            ggCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATgatgacgatgac                                                                                        <  1:637374/140‑1 (MQ=255)                                             gCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGaca                                                                                       >  2:730012/1‑140 (MQ=255)                                             gCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGaca                                                                                       <  1:569472/140‑1 (MQ=255)                                                         aCGGTGTCAGCGCGACACGGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATCGCGATa                                                                           <  2:1684524/140‑1 (MQ=255)                                                            gtgtCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATg                                                                        >  2:557159/1‑140 (MQ=255)                                                              gtCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGc                                                                      <  1:730012/140‑1 (MQ=255)                                                                 aGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAat                                                                   >  1:668681/1‑140 (MQ=255)                                                                  gcgcGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCGGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAata                                                                  >  2:491095/1‑140 (MQ=255)                                                                   cgcgACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAatat                                                                 <  2:566837/140‑1 (MQ=255)                                                                    gcgACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATc                                                                <  1:1170603/140‑1 (MQ=255)                                                                    gcgACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATc                                                                <  2:844840/140‑1 (MQ=255)                                                                      gACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCg                                                              <  2:1378195/140‑1 (MQ=255)                                                                      gACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCg                                                              <  1:741441/140‑1 (MQ=255)                                                                      gACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCg                                                              <  1:664834/140‑1 (MQ=255)                                                                       acacTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCgg                                                             >  1:1386950/1‑140 (MQ=255)                                                                            ggCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGa                                                        <  2:1613094/140‑1 (MQ=255)                                                                               agcaCCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATAc                                                     <  1:1528878/140‑1 (MQ=255)                                                                                 caCCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTc                                                   <  1:668846/140‑1 (MQ=255)                                                                                 caCCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTc                                                   <  2:1345634/140‑1 (MQ=255)                                                                                  aCCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTcc                                                  <  1:1317689/140‑1 (MQ=255)                                                                                  aCCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTcc                                                  >  2:340714/1‑140 (MQ=255)                                                                                     ggCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAgg                                               >  1:1038506/1‑140 (MQ=255)                                                                                     ggCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAgg                                               <  2:668681/140‑1 (MQ=255)                                                                                      gCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGt                                              <  2:1481750/140‑1 (MQ=255)                                                                                      gCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGt                                              >  1:1230231/1‑140 (MQ=255)                                                                                      gCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGt                                              <  2:1038506/140‑1 (MQ=255)                                                                                      gCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGt                                              <  2:553362/140‑1 (MQ=255)                                                                                       cTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGATACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTc                                             >  2:1189090/1‑140 (MQ=255)                                                                                       cTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTc                                             >  1:1286467/1‑140 (MQ=255)                                                                                              aCCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATAc                                      >  1:200998/1‑140 (MQ=255)                                                                                                   ccGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAg                                 <  1:1217382/140‑1 (MQ=255)                                                                                                    cGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGc                                >  1:1114081/1‑140 (MQ=255)                                                                                                      tCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCg                              <  1:557159/140‑1 (MQ=255)                                                                                                          cagTGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCa                          >  1:1635732/1‑140 (MQ=255)                                                                                                             tGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGa                       >  2:1646972/1‑140 (MQ=255)                                                                                                             tGCGGCAACAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGa                       >  2:92940/1‑140 (MQ=255)                                                                                                                    aCAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCAc                >  2:1535421/1‑140 (MQ=255)                                                                                                                     cAGTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCAcg               >  1:112985/1‑140 (MQ=255)                                                                                                                       gTGGCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCAcgcc             >  1:18155/1‑140 (MQ=255)                                                                                                                         ggCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCAcgccgc           <  1:40387/140‑1 (MQ=255)                                                                                                                          gCAAGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCa          >  2:827446/1‑140 (MQ=255)                                                                                                                            aaGGGTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGc        >  1:879784/1‑140 (MQ=255)                                                                                                                               ggTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTg     >  1:1340099/1‑140 (MQ=255)                                                                                                                                gTCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTgc    >  2:249074/1‑140 (MQ=255)                                                                                                                                 tCAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTgcg   <  2:271968/140‑1 (MQ=255)                                                                                                                                  cAGGGACGCGAGACTGTCGGATACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTgcgc  <  1:1189090/140‑1 (MQ=255)                                                                                                                                  cAGGGACGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTgcgc  >  1:237428/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                       AACCACTTTGGCAAAGACATAAATGCCCACGAAAATACCCACCGGCACGCCGACGAACGGTGTCAGCGCGACACTGGCAGCACCGGCTGCGCCACCTCCCGTCAGCAGTGCGGCAACAGTGGCAAGGGTCAGGGCCGCGAGACTGTCGGACACCCCGGTTTTGTTCAGAATGATGACGATGACAACAATGGCGATAATGGCAATATCCGGACTGATACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGC  >  NC_000913/266577‑266845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑