Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,435	0	C	T	26.7%	101.7 / 27.7	60	intergenic (‑179/‑28)	ttdR/ttdA	DNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (5/39);  new base T (16/0);  total (21/39)
Fisher's exact test for biased strand distribution p-value = 1.36e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGA  >  NC_000913/3206296‑3206566                                                                                                                                              |                                                                                                                                    gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTc                                                                                                                                     <  2:1085529/140‑1 (MQ=255)   aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCa                                                                                                                                   <  1:1168129/140‑1 (MQ=255)   aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCa                                                                                                                                   <  2:583436/140‑1 (MQ=255)   aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCa                                                                                                                                   >  1:138247/1‑140 (MQ=255)   aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCa                                                                                                                                   >  2:1168129/1‑140 (MQ=255)     aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGa                                                                                                                                 >  2:728415/1‑140 (MQ=255)       cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACa                                                                                                                               <  1:297990/140‑1 (MQ=255)       cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACa                                                                                                                               <  1:1734420/140‑1 (MQ=255)          tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGCGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAaaaaaaa                                                                                                                            >  2:1284786/1‑139 (MQ=255)                    tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTg                                                                                                                  <  2:1087842/140‑1 (MQ=255)                     gCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTgg                                                                                                                 <  1:585592/140‑1 (MQ=255)                      ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTTAGACAAATAAAAAAAATGGa                                                                                                                >  1:1310762/1‑140 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                               <  1:107248/140‑1 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                               <  1:353916/140‑1 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                               <  1:1437164/140‑1 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                               <  1:1284786/140‑1 (MQ=255)                         tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAATACAAAAAATGGAGtt                                                                                                             >  1:563980/1‑140 (MQ=255)                           gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCGGAAAAAAAAAAAAAATAGAGGTgt                                                                                                           >  2:1437164/1‑139 (MQ=255)                              cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAGACAAAAAAAAAAAATGGAGTTGGCat                                                                                                        >  2:535999/1‑140 (MQ=255)                                 tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatgat                                                                                                     <  1:810975/140‑1 (MQ=255)                                  attcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatgatg                                                                                                    <  2:340316/140‑1 (MQ=255)                                       ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                               <  2:176125/140‑1 (MQ=255)                                       ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                               <  2:138247/140‑1 (MQ=255)                                       ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                               <  2:137908/140‑1 (MQ=255)                                        tcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACGACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGaa                                                                                              <  1:223028/140‑1 (MQ=255)                                          ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTTGTAGTTTGTGGC‑GGT‑GACTTTTTCCAGACAAATACAAAAACTGGAGTTGTCATGATGAGCGAAAg                                                                                            <  2:1928455/140‑1 (MQ=255)                                           tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGAGTTGGCATGATGAGGGaaaaa                                                                                           >  2:1300905/1‑138 (MQ=255)                                            aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGta                                                                                          <  1:1835925/140‑1 (MQ=255)                                            aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGta                                                                                          <  2:284785/140‑1 (MQ=255)                                            aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGta                                                                                          <  1:728492/140‑1 (MQ=255)                                             ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACGACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAAAAGGGATGCCATGATGAGGGGAAGaaa                                                                                         >  2:223028/1‑140 (MQ=255)                                                    gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGATGAGCGGAAGGAAAAAGCaa                                                                                  >  1:755808/1‑140 (MQ=255)                                                     ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCTCATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                 <  1:1852401/140‑1 (MQ=255)                                                     ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                 <  2:1371631/140‑1 (MQ=255)                                                       gATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAGACAAAAACAAAAAAATGAGGTGCCATGATGAGGGAAAGGAATAAACaaaaa                                                                               >  1:1779046/1‑137 (MQ=255)                                                       gATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAGACAAAAACAAAAAAAGGAGTTGCCCTGATGAGGGAAAAGAATAAAAAACaa                                                                               >  1:1332794/1‑139 (MQ=255)                                                        aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAAACAAAAAAAAAAAATGGAGGTGTCATGATGAGCGAAAGTAATAAacaacaag                                                                              >  1:216921/1‑138 (MQ=255)                                                         ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGc                                                                             <  1:728415/140‑1 (MQ=255)                                                                   gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                   <  1:1741280/140‑1 (MQ=255)                                                                    ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCCGACAAAAACAAAAAATGGGGTTGGCATGATGAGGGGAAGTAATAAAAAAAAAGCAGTGAATaaaa                                                                  >  2:1804161/1‑138 (MQ=255)                                                                            atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAAACAAAAAAAAAAAATGGGGGTGGCATGATGAGGGAAAGTAATAAAAAAAAAGCAGTGAATAAAATGACagag                                                          >  2:1137492/1‑140 (MQ=255)                                                                            atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAAAAAAAAAAAAAAAATGGAGGTGCCCTGATGGGGGAAAATAAAAAACAAAAAGCAGTGAAAAAATTTACagag                                                          >  2:162344/1‑140 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑GAATTTTTCC‑GACAAAAACAAAAAAAGGGGTTGTCATGATTAGCGAAAGGAATAAACAAAAAGCAGGGAATAAATTGACAGAGAt                                                        >  2:1190184/1‑140 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCCCACAAAAAAAAAAAATAGAGTTGGCCTGATGAGCGAAAGAAAAAAACAACAAACAGTGAATAAATTGACAgagaa                                                        >  2:1736657/1‑139 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                        <  1:1253634/140‑1 (MQ=255)                                                                                   cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCg                                                   <  1:1804161/140‑1 (MQ=255)                                                                                     gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                 <  1:98537/140‑1 (MQ=255)                                                                                      tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTTTGACCAATACAAAAAATAGAGATGCCCTGATGAGCGAAAGGAATAAATAAAAAGAAGAGAATAAGGTGAAAGAGAATGTCGCTa                                                >  2:788837/1‑140 (MQ=255)                                                                                      tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAATGGAGTTGGCATGATGAGCGAAAGTAATAAACAACAGGCAGTGGAAAAAATGACAAAGAATGTCGcca                                                >  2:83286/1‑138 (MQ=255)                                                                                        gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGGCCTGATGAGCGAAAGAAAAAAAAAAAAGGCAGGGAATAAATTGACAGAGATTGTTGCTAAc                                              >  2:1565929/1‑140 (MQ=255)                                                                                        gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCACACAAAAAAAAAAAATGGAGTTGCCATGATGAGGGAAAATAATAAAAAACAAGCAGGGAATAAAATGACAGAGAATGTCGCTAAc                                              >  2:1708285/1‑140 (MQ=255)                                                                                                  taAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCCGACAAAAAAAAAAAATGGAGGTGGCATGATGAGGGAAAGGAAAAAACAAAAAGCAGGGAAAAAAATGAAAAAGATTGTCGCTAAATTTAACGccc                                    >  2:1682839/1‑139 (MQ=255)                                                                                                  aaaaaCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                    <  2:1332794/139‑1 (MQ=255)                                                                                                  aaaaaCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                    <  1:1682276/139‑1 (MQ=255)                                                                                                      aCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑AAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGAt                                <  1:1736657/140‑1 (MQ=255)                                                                                                        cacaTTTTTAGTGGTAGTTTGTGGC‑GGTGGAATTTTTCC‑GACAAAAACAAAAAATGGAGTTGGCCTGATGAGCGAAAAGAATAAACAAAAGGCAGGGAATAAATTGACAGAGAATGTCGCCAAATTTACCGCCATGAttt                              >  2:192705/1‑140 (MQ=255)                                                                                                         acaTTTTTAGTGGTAGTTTGGGGG‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTc                             <  2:216921/140‑1 (MQ=255)                                                                                                          caTTTTTAGTGGTAGTTTGTGGC‑GGT‑GGAATTTTTCAGACAAAAAAAAAAAAAGGAGGTGCCCTGATGAGGGGAAAGAAAAAAAAAAAAGCAGGGAAAAAATTTACAGAGAATGTCGCTAACTTTTTCGCCCTGAttttt                            >  2:1014039/1‑138 (MQ=255)                                                                                                          caTTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGGCCTGATGAGGGAAAAGAATAAACAACAGGCAATGAATAAGATTACAGAGATTGTCGCTAAATTTACCCCCATggatttt                            >  2:1682276/1‑134 (MQ=255)                                                                                                            tttttAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTAc                          <  1:1190184/140‑1 (MQ=255)                                                                                                                tAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                      <  1:1300905/140‑1 (MQ=255)                                                                                                                tAGTGGTAGTTTGTGGC‑GGT‑AAATTTTTCAAAAAAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACGGGCAGTGAATAAGTGGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                      <  2:1041130/140‑1 (MQ=255)                                                                                                                 aGTGGTAGTTTGTGGC‑GGT‑GATTTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGATGAGCAAAATTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGaa                     <  2:468659/140‑1 (MQ=255)                                                                                                                     gTAGTTTGTGGC‑GGT‑GAATTTTTTCCGACAAATACAAAAAATGGAGGTGGCATGATGAGGGAAAGTAATAAACAAAAGGCAGGGAATAAATTGACAGAGATTGTTGCTAACTTTTTCGCCATTGTTTCTACCCGAAAGcc                 >  2:1039947/1‑140 (MQ=255)                                                                                                                     gTAGTTTGTGGC‑GGT‑GAATTTTTTCCGACAAAAAAAAAAAATGGGGTTGGCATGATGAGGGGAAGGAATAAAAAAAAAGCAGTGAAAAAATTGACAAAGATTGTCGCTTACTTTAACGCCCTGATTTTTACCCCAAAGcc                 >  2:542038/1‑140 (MQ=255)                                                                                                                     gTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGcc                 <  1:542038/140‑1 (MQ=255)                                                                                                                        ttttGTGGG‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtga              <  1:1708285/139‑1 (MQ=255)                                                                                                                          ttGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg            <  1:1039947/140‑1 (MQ=255)                                                                                                                          ttGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg            <  1:1682839/140‑1 (MQ=255)                                                                                                                             tgGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAATGGAGGTGCCATGATGAGCGAAAAGAATAAACAAAAGGCAGGGAAAAAATTGACAGAGATTGTCGCTAACTTTTCCGCCCTGATTTTTACCCGAATGCCTGATGACg         >  2:260891/1‑140 (MQ=255)                                                                                                                              ggC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt        <  1:260891/140‑1 (MQ=255)                                                                                                                               gC‑GGT‑GAATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg       <  2:563980/140‑1 (MQ=255)                                                                                                                                   gT‑GAATTTTTTCAGACAAATACAAAAAATGGAGTTGGCATGATGAGCGAAAAAAATAAACAAAAAGCAGTGAATAAATTGACAGAGAATGTCGCTAACTTTTCCGCCCTGATTTCTACCCGAATGCCTGATGACgtgggg    >  2:1236882/1‑138 (MQ=255)                                                                                                                                      gAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa  <  1:1137492/140‑1 (MQ=255)                                                                                                                                              |                                                                                                                                    GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGA  >  NC_000913/3206296‑3206566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑