Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,101,5140GT21.4% 193.3 / 17.7 70intergenic (+84/‑176)sodA/kdgTsuperoxide dismutase (Mn)/2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base G (10/45);  new base T (15/0);  total (25/45)
Fisher's exact test for biased strand distribution p-value = 4.53e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAG  >  NC_000913/4101379‑4101645
                                                                                                                                       |                                                                                                                                   
gAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAt                                                                                                                                 <  1:519277/140‑1 (MQ=255)
gAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAt                                                                                                                                 <  1:449798/140‑1 (MQ=255)
gAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAt                                                                                                                                 <  2:1657012/140‑1 (MQ=255)
gAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGAt                                                                                                                                 >  1:1175800/1‑140 (MQ=255)
gAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGGTTTTTTTTGAt                                                                                                                                 >  2:781673/1‑140 (MQ=255)
     tggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAAtt                                                                                                                            >  1:913344/1‑140 (MQ=255)
     tggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATTAAtt                                                                                                                            >  2:685525/1‑140 (MQ=255)
      ggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAAttt                                                                                                                           >  1:1087202/1‑140 (MQ=255)
       gtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAtttt                                                                                                                          >  2:404106/1‑139 (MQ=255)
          aaCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCaaa                                                                                                                       >  1:796287/1‑140 (MQ=255)
          aaCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCaaa                                                                                                                       <  2:1087202/140‑1 (MQ=255)
              gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATaa                                                                                                                   <  1:1464757/140‑1 (MQ=255)
              gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATaa                                                                                                                   <  2:894868/140‑1 (MQ=255)
              gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATaa                                                                                                                   <  1:404106/140‑1 (MQ=255)
               ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATCAATTTTAAAATaaa                                                                                                                  >  1:1301654/1‑140 (MQ=255)
               ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATTAATTTTtaaataaa                                                                                                                  >  2:1468691/1‑140 (MQ=255)
               ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTCaaaaaaaa                                                                                                                  >  2:1162332/1‑140 (MQ=255)
                 aCGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATaaaaa                                                                                                                >  1:1548736/1‑140 (MQ=255)
                  cGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTTAAAATaaaaaa                                                                                                               >  2:1965409/1‑139 (MQ=255)
                    aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTCAATTTCAAAATaaaaaaaa                                                                                                             >  2:1364963/1‑140 (MQ=255)
                    aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTTAAAATaaaaaaaa                                                                                                             >  2:2010905/1‑140 (MQ=255)
                      gcagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATg                                                                                                           >  1:3372/1‑140 (MQ=255)
                        agcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGAt                                                                                                         <  1:2010905/140‑1 (MQ=255)
                         gcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTTAAAATAAAAAAAAAGATc                                                                                                        >  1:1186034/1‑140 (MQ=255)
                             cACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                    <  2:796287/140‑1 (MQ=255)
                             cACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                    <  2:570083/140‑1 (MQ=255)
                             cACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                    <  2:908216/140‑1 (MQ=255)
                             cACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                    <  2:1263047/140‑1 (MQ=255)
                                        gcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAAc                                                                                         <  2:1955925/140‑1 (MQ=255)
                                         cgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACa                                                                                        <  1:1965409/140‑1 (MQ=255)
                                          gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGCTTTTTTGTGGTCAAATTCTAAAAAAAAACAATGTTCCGATAAAAATAAAAAAg                                                                                       >  2:537521/1‑140 (MQ=255)
                                             aaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGt                                                                                    <  1:619481/140‑1 (MQ=255)
                                                ataatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTc                                                                                 <  2:1795994/140‑1 (MQ=255)
                                                   atCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAt                                                                              <  1:1197604/140‑1 (MQ=255)
                                                   atCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAt                                                                              <  2:371243/140‑1 (MQ=255)
                                                        ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                         <  2:1301654/140‑1 (MQ=255)
                                                        ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                         <  2:3372/140‑1 (MQ=255)
                                                        ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                         <  2:1993153/140‑1 (MQ=255)
                                                         tGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                         <  2:926692/139‑1 (MQ=255)
                                                         tGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                         >  1:926692/1‑139 (MQ=255)
                                                          gccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtgtg                                                                       <  1:672907/140‑1 (MQ=255)
                                                          gccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtgtg                                                                       <  2:1548736/140‑1 (MQ=255)
                                                                  ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt                                                               <  1:1364963/140‑1 (MQ=255)
                                                                  ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt                                                               <  1:685525/140‑1 (MQ=255)
                                                                    gcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCa                                                             <  2:2015043/140‑1 (MQ=255)
                                                                      aaTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACt                                                           <  1:1263926/140‑1 (MQ=255)
                                                                        tGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACttt                                                         >  1:765971/1‑140 (MQ=255)
                                                                           ggCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGAGGTTTTTTTTTGATCAAATTTACAATAAAAAAAATGATCCGCTAAAAAAAAAACAACGGTTTAATTGATTTGGTTTTGGTCACTTTTAt                                                      >  2:232608/1‑140 (MQ=255)
                                                                            gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATCAATTTTAAAAAAAAAACAATAATCCGATAAAAAAAAAAAAGCGTTTTAATTTATGTGGTTTTTTTCACTTTTAtt                                                     >  2:1047782/1‑140 (MQ=255)
                                                                              gTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGa                                                   <  1:1468691/140‑1 (MQ=255)
                                                                               tataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGTTCAATTTTCAAAAAAAAAAAATTAATCGATAAAAATAAAAAAGCGTTTCAATTTATGTGGTTTTTATCACTTTTTTTTAt                                                  >  2:1287892/1‑140 (MQ=255)
                                                                                ataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAtt                                                 <  2:1175800/140‑1 (MQ=255)
                                                                                 taGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTCAAAATAAAAACAATGAACCGATAAAAATAAAACAACGTTTCAATTGATGTGGTTTTTATTAATTTTTTttatta                                                >  2:1475891/1‑140 (MQ=255)
                                                                                    gCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTCAAAATAAAAAAAATGATCCGATAAAAATAAAAAAGCGTTTCAATTGATGTGGTTTTTATCACTTTTATTTATTAaat                                             >  1:466604/1‑140 (MQ=255)
                                                                                      cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTCAATTTTAAAATAAAAAAAATGATCCGATAAAAATAAAAAAACGTTTCAATTGATGTGGTTTTTATCACTTTTATTTATTAaatga                                           >  2:44572/1‑140 (MQ=255)
                                                                                      cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTTAAAATAAAAAAAATGATCCGATAAAAATAAAAAAGCGTTTCAATTTATGTGGTTTTGATCACTTTTATTTATTAaaaga                                           >  2:1377379/1‑140 (MQ=255)
                                                                                       gCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaa                                          <  1:1377379/140‑1 (MQ=255)
                                                                                        cATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaat                                         <  2:1391171/140‑1 (MQ=255)
                                                                                        cATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaat                                         <  2:2000807/140‑1 (MQ=255)
                                                                                         atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATCAATTTCAAAAAAAAAAAAAAGATCCCATAAAAATAAAAAAGCCGTTTAATTGATGTGGTTTTTATCACTTTTATTGATTAaatgaatt                                        >  2:1880364/1‑139 (MQ=255)
                                                                                         atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaatg                                        >  1:169770/1‑140 (MQ=255)
                                                                                          tatCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGt                                       <  2:2045494/140‑1 (MQ=255)
                                                                                               gCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATc                                  <  1:44572/140‑1 (MQ=255)
                                                                                                cTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCt                                 <  1:1287892/140‑1 (MQ=255)
                                                                                                cTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTTAAAATAAAAAAAAAGATCCGATAAAAATAAAAAAGCGTTTTAATTTATGTGGGTTTTATTACTTTTTTTTATTAAATGAAAGTCTAttt                                 >  2:365296/1‑138 (MQ=255)
                                                                                                     aaaaTGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt                            <  1:781673/140‑1 (MQ=255)
                                                                                                     aaaaTGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt                            <  2:703250/140‑1 (MQ=255)
                                                                                                         tGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTCAATTTTAAAAAAAAAACAAAGATCCGATAAAAATAAAAAAACGTTTCAATTTATGTGGGTTTGATTACTTTTATTGATTTAATGAATGTCTATCTTTGttttcc                        >  2:1323174/1‑137 (MQ=255)
                                                                                                          gAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTCAAAATAAAAACAATGATCCGATAAAAAAAAAACAGCGTTTTAATTGATGTGGTTTTTTTCACTTTTATTTATTAAATTAATGTCTATCTTCTTTTTCAt                       >  2:1824595/1‑140 (MQ=255)
                                                                                                          gAACCATCGCCAACGGCGGTGGGTTTTTTGTGATCAATTTTAAAATAAAAAAAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTTTTTATTAAATGAATGTCTATCTTCGTTTCCAt                       >  1:813167/1‑140 (MQ=255)
                                                                                                           aaCCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATc                      <  1:1824595/140‑1 (MQ=255)
                                                                                                           aaCCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTCAAAAAAAAAACAAAGAACCGGTAAAAATAAAAAAGCGGTTCAATTGATGTGGTTTTGTTCACTTTTATTTATTAAATGAAAGTCTATCTTTGTTTCCATc                      >  2:231736/1‑140 (MQ=255)
                                                                                                               aTCGCCAACGGCGGTGGGTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAaca                  >  1:607550/1‑140 (MQ=255)
                                                                                                                     aaCGGCGGTGGTTTTTTTTTGATCAATTTTAAAAAAAAAAAAAAGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTTTTTATTAAATGAATGTCTATCTTTGTTTCCATCAACACTGATg            >  2:1124149/1‑140 (MQ=255)
                                                                                                                     aaCGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATg            <  1:232608/140‑1 (MQ=255)
                                                                                                                     aaCGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATg            <  2:169770/140‑1 (MQ=255)
                                                                                                                       cggcggTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCt          <  2:466604/140‑1 (MQ=255)
                                                                                                                        ggcggTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTc         <  2:607550/140‑1 (MQ=255)
                                                                                                                          cggTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCa       <  2:913344/140‑1 (MQ=255)
                                                                                                                             tgggTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTg    >  1:1046572/1‑140 (MQ=255)
                                                                                                                               gtTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAg  <  2:1100587/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                   
GAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAG  >  NC_000913/4101379‑4101645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑