BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,436,014	G→T	E270* (GAA→TAA)	rsmB →	16S rRNA m(5)C967 methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,436,014	0	G	T	100.0%	365.1 / NA	102	E270* (GAA→TAA)	rsmB	16S rRNA m(5)C967 methyltransferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (53/49); total (53/49)

Only 100 of 103 total aligned reads displayed.

AAGACGGATGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCAGAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCAA  >  NC_000913/3435877‑3436148

aaGACGGATGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATaa                                                                                                                                      >  2:1617725/1‑140 (MQ=255)

aaGACGGATGGGTTACCGTTCAGGATGCATC‑GCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAg                                                                                                                                     >  1:597787/1‑140 (MQ=255)

    cGGATGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCACCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAgcgc                                                                                                                                  >  1:1383010/1‑140 (MQ=255)

       aTGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAgg                                                                                                                               >  2:571962/1‑140 (MQ=255)

          ggTTACCGTTCAGGATGCATC‑GCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGgttgt                                                                                                                           <  2:597787/140‑1 (MQ=255)

                cGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCgg                                                                                                                      <  1:125522/140‑1 (MQ=255)

                 gTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGt                                                                                                                     >  1:730093/1‑140 (MQ=255)

                    cAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGa                                                                                                                  <  2:1468170/140‑1 (MQ=255)

                     aGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGat                                                                                                                 >  2:482889/1‑140 (MQ=255)

                     aGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGat                                                                                                                 >  1:1612483/1‑140 (MQ=255)

                      ggATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGata                                                                                                                >  2:855182/1‑140 (MQ=255)

                          gCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATcga                                                                                                            >  2:214011/1‑140 (MQ=255)

                           cATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATcgac                                                                                                           >  2:326947/1‑140 (MQ=255)

                                 cacaAGGTTGTATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAg                                                                                                     >  1:888733/1‑140 (MQ=255)

                                 cacaAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAg                                                                                                     >  2:1157937/1‑140 (MQ=255)

                                   caAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAgcg                                                                                                   <  2:1333824/140‑1 (MQ=255)

                                   caAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAgcg                                                                                                   <  1:214011/140‑1 (MQ=255)

                                     aGGTTGCATGACCTGGCTTGCGCCGCAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGcc                                                                                                 <  2:730093/140‑1 (MQ=255)

                                     aGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGcc                                                                                                 >  2:2000995/1‑140 (MQ=255)

                                      ggTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCct                                                                                                >  1:1659037/1‑140 (MQ=255)

                                          gCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCctctct                                                                                            <  2:1297259/140‑1 (MQ=255)

                                           cATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAg                                                                                                     <  1:586657/130‑1 (MQ=255)

                                           cATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAg                                                                                                     >  2:586657/1‑130 (MQ=255)

                                           cATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCtctctc                                                                                           >  2:416921/1‑140 (MQ=255)

                                           cATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCtctctc                                                                                           >  1:1172723/1‑140 (MQ=255)

                                           cATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCtctctc                                                                                           <  2:109770/140‑1 (MQ=255)

                                                ccTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGtt                                                                                      >  1:1824691/1‑140 (MQ=255)

                                                 cTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCtctctc                                                                                           <  2:1560023/134‑1 (MQ=255)

                                                 cTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCtctctc                                                                                           >  1:1560023/1‑134 (MQ=255)

                                                 cTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGttt                                                                                     >  2:898115/1‑140 (MQ=255)

                                                  tGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTa                                                                                    >  2:1139763/1‑140 (MQ=255)

                                                   ggCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTAc                                                                                   >  2:1197106/1‑140 (MQ=255)

                                                    gCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACg                                                                                  <  2:1172723/140‑1 (MQ=255)

                                                     cTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGa                                                                                 <  1:248688/140‑1 (MQ=255)

                                                        gcgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACaa                                                                              >  2:751359/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  2:22516/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  2:162300/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  1:1108112/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  1:1373631/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  1:1684942/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  2:590576/1‑140 (MQ=255)

                                                         cgcCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAAt                                                                             >  2:440789/1‑140 (MQ=255)

                                                              caAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTaaa                                                                        <  1:667928/140‑1 (MQ=255)

                                                              caAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTaaa                                                                        <  1:2000995/140‑1 (MQ=255)

                                                              caAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCCCTCGGGTTTACGACAATTTaaa                                                                        >  2:228524/1‑140 (MQ=255)

                                                               aaaaCGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTaaaa                                                                       <  1:440789/140‑1 (MQ=255)

                                                               aaaaCGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTaaaa                                                                       <  1:1617725/140‑1 (MQ=255)

                                                                aaaCGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAAc                                                                      <  2:1160850/140‑1 (MQ=255)

                                                                    ggTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCt                                                                  <  2:1659037/140‑1 (MQ=255)

                                                                    ggTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCt                                                                  <  2:1373631/140‑1 (MQ=255)

                                                                    ggTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCt                                                                  <  2:1171695/140‑1 (MQ=255)

                                                                    ggTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCt                                                                  <  2:129425/140‑1 (MQ=255)

                                                                        aaCACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGt                                                              <  1:882875/140‑1 (MQ=255)

                                                                        aaCACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGt                                                              >  1:1588684/1‑140 (MQ=255)

                                                                         acacATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTa                                                             >  1:1995137/1‑140 (MQ=255)

                                                                             aTTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGaa                                                         <  1:996749/140‑1 (MQ=255)

                                                                             aTTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGaa                                                         >  1:1664365/1‑140 (MQ=255)

                                                                                ttGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGc                                                      <  1:416921/140‑1 (MQ=255)

                                                                                ttGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGc                                                      <  2:888733/140‑1 (MQ=255)

                                                                                ttGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGc                                                      <  2:647347/140‑1 (MQ=255)

                                                                                ttGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGc                                                      <  1:732627/140‑1 (MQ=255)

                                                                                  ggATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGa                                                    >  1:128889/1‑140 (MQ=255)

                                                                                     tCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCg                                                 >  2:1343694/1‑140 (MQ=255)

                                                                                     tCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCg                                                 <  1:999759/140‑1 (MQ=255)

                                                                                       tttGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTg                                               <  1:1139763/140‑1 (MQ=255)

                                                                                        ttGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGa                                              >  1:1052702/1‑140 (MQ=255)

                                                                                           tgCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAAc                                           <  2:1108112/140‑1 (MQ=255)

                                                                                           tgCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAAc                                           <  2:1052702/140‑1 (MQ=255)

                                                                                                cccccGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGt                                      >  2:1522219/1‑140 (MQ=255)

                                                                                                   ccGGTGGTAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGAt                                   <  2:208431/140‑1 (MQ=255)

                                                                                                      gcggTAAAACAACGCATCTCCTTGAGGTGGCACCATACGCGCAGCTTGTTGCGGTTGATATCGCCGAACCGCGCCGCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGTTGGc                                <  2:1409433/140‑1 (MQ=255)

                                                                                                          tAAAACAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGtt                            <  1:22516/140‑1 (MQ=255)

                                                                                                           aaaaCAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTa                           <  2:268177/140‑1 (MQ=255)

                                                                                                           aaaaCAACGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCCCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTa                           <  1:228524/140‑1 (MQ=255)

                                                                                                             aacaacGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTAcc                         <  1:898115/140‑1 (MQ=255)

                                                                                                             aacaacGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTAcc                         <  1:590576/140‑1 (MQ=255)

                                                                                                             aacaacGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTAcc                         <  2:1824691/140‑1 (MQ=255)

                                                                                                             aacaacGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTAcc                         <  2:1588684/140‑1 (MQ=255)

                                                                                                                aacGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCtt                      <  2:65769/140‑1 (MQ=255)

                                                                                                                  cGCATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTtct                    >  1:1870910/1‑140 (MQ=255)

                                                                                                                    cATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCa                  <  1:855182/140‑1 (MQ=255)

                                                                                                                    cATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCa                  <  1:1343694/140‑1 (MQ=255)

                                                                                                                    cATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCa                  >  1:567576/1‑140 (MQ=255)

                                                                                                                    cATATCCTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCa                  <  1:482889/140‑1 (MQ=255)

                                                                                                                          cTTGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGgtg            <  2:1684942/140‑1 (MQ=255)

                                                                                                                            tGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTa                           <  2:1991011/123‑1 (MQ=255)

                                                                                                                            tGAGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTa                           >  1:1991011/1‑123 (MQ=255)

                                                                                                                              aGGTGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGc        >  2:914074/1‑140 (MQ=255)

                                                                                                                                 tGGCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAg     >  1:1958570/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTTATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  1:1496964/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCa                  >  1:1673851/1‑125 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCa                  <  2:1673851/125‑1 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  1:1827221/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  1:368121/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  2:797722/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  2:848206/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  2:86196/1‑140 (MQ=255)

                                                                                                                                   gCACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCa   >  1:127490/1‑140 (MQ=255)

                                                                                                                                    cACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCaa  <  2:1870910/140‑1 (MQ=255)

                                                                                                                                    cACCATAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCaa  >  1:1247689/1‑140 (MQ=255)

AAGACGGATGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCAGAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCAA  >  NC_000913/3435877‑3436148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`