BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	293,137	C→A	intergenic (‑189/+83)	yagK ← / ← yagL	CP4‑6 prophage; uncharacterized protein YagK/CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	293,137	0	C	A	100.0%	624.5 / NA	170	intergenic (‑189/+83)	yagK/yagL	CP4‑6 prophage; uncharacterized protein YagK/CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (100/70); total (100/70)

Only 100 of 170 total aligned reads displayed.

CCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACTGATACT  >  NC_000913/293000‑293273

ccATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATa                                                                                                                                        >  1:1725349/1‑140 (MQ=255)

ccATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATa                                                                                                                                        >  1:907806/1‑140 (MQ=255)

   tACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATcc                                                                                                                                     <  2:382061/140‑1 (MQ=255)

          aggGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCt                                                                                                                              >  1:336050/1‑140 (MQ=255)

                      ggTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACg                                                                                                                  >  1:489603/1‑140 (MQ=255)

                      ggTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACg                                                                                                                  <  2:1960795/140‑1 (MQ=255)

                      ggTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACg                                                                                                                  <  1:1418306/140‑1 (MQ=255)

                       gTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGa                                                                                                                 >  2:498420/1‑140 (MQ=255)

                          aCTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAgg                                                                                                              <  2:1028053/140‑1 (MQ=255)

                          aCTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAgg                                                                                                              <  2:1277345/140‑1 (MQ=255)

                          aCTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAgg                                                                                                              <  2:907806/140‑1 (MQ=255)

                            tgttgtCTGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTa                                                                                                            >  1:919149/1‑140 (MQ=255)

                               tgtCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTTGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGcc                                                                                                         <  1:877590/140‑1 (MQ=255)

                               tgtCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGcc                                                                                                         <  2:558093/140‑1 (MQ=255)

                                 tCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGcccc                                                                                                       >  1:800433/1‑140 (MQ=255)

                                      atataCTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAg                                                                                                               <  1:1250237/127‑1 (MQ=255)

                                        ataCTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCtgt                                                                                                >  1:721452/1‑140 (MQ=255)

                                        ataCTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCtgt                                                                                                >  2:859811/1‑140 (MQ=255)

                                        ataCTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCtgt                                                                                                >  1:1837968/1‑140 (MQ=255)

                                        ataCTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCtgt                                                                                                >  1:179257/1‑140 (MQ=255)

                                           cTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGAt                                                                                             <  2:489603/140‑1 (MQ=255)

                                             ggTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACATAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATgg                                                                                           <  1:945305/140‑1 (MQ=255)

                                             ggTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATgg                                                                                           >  1:959417/1‑140 (MQ=255)

                                               tATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGccc                                                                                                        >  1:1109097/1‑125 (MQ=255)

                                               tATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCt                                                                                         >  1:1221223/1‑140 (MQ=255)

                                                 tCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGt                                                                                       >  2:1728268/1‑140 (MQ=255)

                                                        ttAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAg                                                                                <  2:1400190/140‑1 (MQ=255)

                                                            tACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTGGCCCCAGCCTGTGATGGCTGTTAAAAAGTTAc                                                                            <  2:752527/140‑1 (MQ=255)

                                                            tACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTAc                                                                            >  2:47351/1‑140 (MQ=255)

                                                               ggACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATgg                                                                                           >  1:983484/1‑122 (MQ=255)

                                                                       tgatctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAg                                                                 <  2:1837968/140‑1 (MQ=255)

                                                                          tctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCtt                                                              >  1:1392586/1‑140 (MQ=255)

                                                                          tctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCtt                                                              <  1:1445802/140‑1 (MQ=255)

                                                                          tctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCtt                                                              <  1:859811/140‑1 (MQ=255)

                                                                          tctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCtt                                                              >  2:1139155/1‑140 (MQ=255)

                                                                           ctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTc                                                             >  1:1039298/1‑140 (MQ=255)

                                                                           ctgatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTc                                                             >  2:1012508/1‑140 (MQ=255)

                                                                             gatTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTg                                                           >  2:1986882/1‑140 (MQ=255)

                                                                              atTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTgg                                                          >  2:13157/1‑140 (MQ=255)

                                                                              atTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATAACCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTgg                                                          >  2:417371/1‑140 (MQ=255)

                                                                                tactacTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGaa                                                        >  2:632117/1‑140 (MQ=255)

                                                                                 actactCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAGGTTACTCTGCAATTAGCTTCTGGAAt                                                       <  2:1484670/140‑1 (MQ=255)

                                                                                 actactCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAAt                                                       >  2:1360435/1‑140 (MQ=255)

                                                                                  ctactCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAAtt                                                      <  1:1717840/140‑1 (MQ=255)

                                                                                   tactCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTa                                                     >  1:786701/1‑140 (MQ=255)

                                                                                   tactCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAACCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTa                                                     <  2:345299/140‑1 (MQ=255)

                                                                                      tctTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAAcc                                                  <  2:800433/140‑1 (MQ=255)

                                                                                          aCTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCgatg                                              >  1:85302/1‑140 (MQ=255)

                                                                                          aCTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCgatg                                              >  2:1560154/1‑140 (MQ=255)

                                                                                          aCTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCgatg                                              >  2:1497872/1‑140 (MQ=255)

                                                                                             ggTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGAtt                                           <  2:1508167/140‑1 (MQ=255)

                                                                                              gTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTc                                          <  1:1012508/140‑1 (MQ=255)

                                                                                               tGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTcc                                         >  1:958678/1‑140 (MQ=255)

                                                                                                 aaTACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGt                                       <  1:1986882/140‑1 (MQ=255)

                                                                                                   tACAGGTAGTAAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTa                                     <  1:673768/140‑1 (MQ=255)

                                                                                                      aGGTAGTAAGAGTACACAATGCCATTATATAATACATAACCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTc                                  <  1:417371/140‑1 (MQ=255)

                                                                                                        gtagtaAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCa                                >  1:905971/1‑140 (MQ=255)

                                                                                                        gtagtaAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCa                                >  1:669796/1‑140 (MQ=255)

                                                                                                         tagtaAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAg                               <  2:958678/140‑1 (MQ=255)

                                                                                                         tagtaAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAg                               <  1:498420/140‑1 (MQ=255)

                                                                                                           gtaAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTg                             <  2:721452/140‑1 (MQ=255)

                                                                                                            taAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGc                            <  2:69860/140‑1 (MQ=255)

                                                                                                            taAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGc                            >  1:1635587/1‑140 (MQ=255)

                                                                                                            taAGAGTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGc                            <  1:1817548/140‑1 (MQ=255)

                                                                                                                agTACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCTCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCt                        >  2:1725524/1‑140 (MQ=255)

                                                                                                                  tACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGc                            <  1:1298810/134‑1 (MQ=255)

                                                                                                                  tACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTc                      >  1:1139998/1‑140 (MQ=255)

                                                                                                                  tACACAATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTc                      >  1:751667/1‑140 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    <  1:1305721/140‑1 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    <  2:565841/140‑1 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    >  1:1338366/1‑140 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    >  1:1131569/1‑140 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    >  1:244868/1‑140 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    <  2:179257/140‑1 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    <  2:1221223/140‑1 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    >  2:1680844/1‑140 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    >  1:565841/1‑140 (MQ=255)

                                                                                                                    cacaATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTcac                    >  1:544181/1‑140 (MQ=255)

                                                                                                                      caATGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAg                  <  2:293933/140‑1 (MQ=255)

                                                                                                                         tGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAg                  >  2:370347/1‑137 (MQ=255)

                                                                                                                         tGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAg                  <  1:370347/137‑1 (MQ=255)

                                                                                                                         tGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCg               >  1:321294/1‑140 (MQ=255)

                                                                                                                         tGCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCg               >  2:79048/1‑140 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              >  2:192768/1‑140 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              >  1:831440/1‑140 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              >  2:923471/1‑140 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              <  2:1334131/140‑1 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              >  1:590245/1‑140 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              >  1:148938/1‑140 (MQ=255)

                                                                                                                          gCCATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGa              >  1:1930159/1‑140 (MQ=255)

                                                                                                                            cATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATa            >  1:1276239/1‑140 (MQ=255)

                                                                                                                            cATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATa            <  2:877363/140‑1 (MQ=255)

                                                                                                                            cATTATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCAAGTGCCGCTTCACAGTCGATa            <  2:1252566/140‑1 (MQ=255)

                                                                                                                              ttATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATaaa          >  1:1522322/1‑140 (MQ=255)

                                                                                                                              ttATATAATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTG‑CGCTTCACAGTCGATAAAc         <  1:47351/140‑1 (MQ=255)

                                                                                                                                atataATACATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACt        <  2:669796/140‑1 (MQ=255)

                                                                                                                                  ataataCATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACTGa      <  2:1169506/140‑1 (MQ=255)

                                                                                                                                   taataCATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACTGa      >  1:1932241/1‑139 (MQ=255)

                                                                                                                                   taataCATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACTGa      <  2:1932241/139‑1 (MQ=255)

                                                                                                                                      taCATATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACTGa      <  2:1890631/136‑1 (MQ=255)

CCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACAATGCCATTATATAATACCTATCCAACATCTAAATTTGAGACGAAGGTAGCCCCAGCCTGTGATGGCTGTTAAAAAGTTACTCTGCAATTAGCTTCTGGAATTAACCGATGATTCCGTTATTCCAGTGCCGCTTCACAGTCGATAAACTGATACT  >  NC_000913/293000‑293273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`