BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,351,229	G→T	A145D (GCT→GAT)	dcuS ←	sensory histidine kinase DcuS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,351,229	0	G	T	100.0%	475.4 / NA	130	A145D (GCT→GAT)	dcuS	sensory histidine kinase DcuS
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (66/64); total (66/64)

Only 100 of 132 total aligned reads displayed.

GCCAAATAATACCGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAAGCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCGGTAA  >  NC_000913/4351093‑4351364

gCCAAATAATACCGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCt                                                                                                                                      >  2:244268/1‑140 (MQ=255)

  cAAATAATACCGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTgc                                                                                                                                    >  1:1731011/1‑140 (MQ=255)

     ataataCCGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACACCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGcc                                                                                                                                 >  1:357554/1‑140 (MQ=255)

         taCCGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGaa                                                                                                                             <  1:1649666/140‑1 (MQ=255)

           ccGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGaaaa                                                                                                                           <  2:418834/140‑1 (MQ=255)

             gACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAAcc                                                                                                                         <  1:11143/140‑1 (MQ=255)

              aCCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACcg                                                                                                                        >  1:1503500/1‑140 (MQ=255)

              aCCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACcg                                                                                                                        >  1:1853548/1‑140 (MQ=255)

              aCCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACcg                                                                                                                        >  1:1528479/1‑140 (MQ=255)

              aCCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACcg                                                                                                                        >  2:1360520/1‑140 (MQ=255)

                 aGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGa                                                                                                                     <  2:1520172/140‑1 (MQ=255)

                  gATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGAt                                                                                                                    >  1:956460/1‑140 (MQ=255)

                   aTAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGAtt                                                                                                                   >  2:1548243/1‑140 (MQ=255)

                      aTGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAAT‑CGCGTAAATCCTGCGCCAGAAAACCGCGATTGATa                                                                                                               <  1:1607403/140‑1 (MQ=255)

                       tGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATa                                                                                                               >  2:727165/1‑140 (MQ=255)

                       tGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATa                                                                                                               <  2:2008495/140‑1 (MQ=255)

                            cAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGAc                                                                                                          >  2:425754/1‑140 (MQ=255)

                             aGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACa                                                                                                         >  1:897294/1‑140 (MQ=255)

                             aGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACa                                                                                                         >  2:1614432/1‑140 (MQ=255)

                             aGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACa                                                                                                         >  1:269247/1‑140 (MQ=255)

                             aGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACa                                                                                                         >  2:303109/1‑140 (MQ=255)

                                 aCTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGAt                                                                                                                >  1:1010749/1‑129 (MQ=255)

                                 aCTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGAt                                                                                                                <  2:1010749/129‑1 (MQ=255)

                                             cTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCa                                                                                         <  1:1193362/140‑1 (MQ=255)

                                              tGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAg                                                                                        <  1:213438/140‑1 (MQ=255)

                                              tGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAg                                                                                        <  2:1853548/140‑1 (MQ=255)

                                              tGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAg                                                                                        <  1:354391/140‑1 (MQ=255)

                                              tGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAg                                                                                        <  1:408485/140‑1 (MQ=255)

                                               gTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAgc                                                                                       >  2:164631/1‑140 (MQ=255)

                                               gTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAgc                                                                                       >  1:1337193/1‑140 (MQ=255)

                                               gTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAgc                                                                                       >  1:515541/1‑140 (MQ=255)

                                                ttGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAgcg                                                                                      <  1:1614432/140‑1 (MQ=255)

                                                 tGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAgcgc                                                                                     >  1:1907873/1‑140 (MQ=255)

                                                        cacGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAgg                                                                              >  2:397896/1‑140 (MQ=255)

                                                        cacGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAgg                                                                              <  2:956460/140‑1 (MQ=255)

                                                        cacGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAgg                                                                              <  2:1081837/140‑1 (MQ=255)

                                                        cacGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAgg                                                                              <  1:798765/140‑1 (MQ=255)

                                                        cacGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAg                                                                               >  1:1271553/1‑139 (MQ=255)

                                                        cacGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCATCGCCATTCAGCGCTTTAAgg                                                                              >  2:297414/1‑140 (MQ=255)

                                                         acGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGa                                                                             >  1:1472754/1‑140 (MQ=255)

                                                          cGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGAt                                                                            >  1:1675544/1‑140 (MQ=255)

                                                          cGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGAt                                                                            >  2:1823676/1‑140 (MQ=255)

                                                          cGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGAt                                                                            >  2:1644351/1‑140 (MQ=255)

                                                          cGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGAt                                                                            >  2:1578099/1‑140 (MQ=255)

                                                          cGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGAt                                                                            >  2:1202500/1‑140 (MQ=255)

                                                               tAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGtcat                                                                       <  1:1231440/140‑1 (MQ=255)

                                                                aaCTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGtca                                                                        <  1:1083702/138‑1 (MQ=255)

                                                                aaCTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGtca                                                                        >  2:1083702/1‑138 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGc                                                                                                             >  1:829709/1‑94 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGc                                                                                                             <  2:829709/94‑1 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGtcat                                                                       >  1:270922/1‑132 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGtcat                                                                       <  2:270922/132‑1 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTa                                                               <  2:1999263/140‑1 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTa                                                               >  2:464887/1‑140 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTa                                                               >  2:454684/1‑140 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCACCATTCAGCGCTTTAAGGATGTCATCACCTTTa                                                               >  1:967999/1‑140 (MQ=255)

                                                                       ggCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGAT‑GGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTaa                                                              >  1:1581644/1‑140 (MQ=255)

                                                                         ccGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTaaa                                                             <  1:1823676/140‑1 (MQ=255)

                                                                           gATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATg                                                           >  2:1132366/1‑140 (MQ=255)

                                                                           gATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATg                                                           >  1:436750/1‑140 (MQ=255)

                                                                            aTCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          >  2:259788/1‑140 (MQ=255)

                                                                            aTCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          >  2:369605/1‑140 (MQ=255)

                                                                            aTCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          >  2:697617/1‑140 (MQ=255)

                                                                            aTCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          >  1:1568642/1‑140 (MQ=255)

                                                                            aTCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          >  2:1195439/1‑140 (MQ=255)

                                                                            aTCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          >  2:807374/1‑140 (MQ=255)

                                                                            aTCGCCACCACACCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATgg                                                          <  2:357554/140‑1 (MQ=255)

                                                                              cGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCt                                                        <  1:697617/140‑1 (MQ=255)

                                                                              cGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCt                                                        <  1:1548243/140‑1 (MQ=255)

                                                                              cGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCt                                                        <  2:269247/140‑1 (MQ=255)

                                                                              cGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCt                                                        <  2:1674492/140‑1 (MQ=255)

                                                                              cGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCt                                                        <  2:1309966/140‑1 (MQ=255)

                                                                                   ccacGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCa                                                   <  2:1675544/140‑1 (MQ=255)

                                                                                       gCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATAc                                               >  2:1671593/1‑140 (MQ=255)

                                                                                         cAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGc                                             <  1:1195439/140‑1 (MQ=255)

                                                                                              tGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGc                                        <  2:1907873/140‑1 (MQ=255)

                                                                                                tttATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCtt                                      >  1:727188/1‑140 (MQ=255)

                                                                                                        tttCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATGCGCTGGGCTTCAGGATGc                              <  1:727165/140‑1 (MQ=255)

                                                                                                        tttCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGc                              >  1:316543/1‑140 (MQ=255)

                                                                                                          tCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGa                            <  2:1568642/140‑1 (MQ=255)

                                                                                                          tCATCGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGa                            <  2:727188/140‑1 (MQ=255)

                                                                                                              cGTAGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAg                        <  1:710018/140‑1 (MQ=255)

                                                                                                                 aGATGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGa                     <  2:740259/140‑1 (MQ=255)

                                                                                                                   aTGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAg                   <  2:1337193/140‑1 (MQ=255)

                                                                                                                    tGGGGGTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGa                  <  2:316543/140‑1 (MQ=255)

                                                                                                                      ggggTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACt                <  1:1040031/140‑1 (MQ=255)

                                                                                                                      ggggTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACt                <  1:397896/140‑1 (MQ=255)

                                                                                                                        ggTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGa                  >  1:283638/1‑136 (MQ=255)

                                                                                                                        ggTAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACttt              >  2:1173456/1‑140 (MQ=255)

                                                                                                                          tAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGc            >  2:463039/1‑140 (MQ=255)

                                                                                                                          tAAATACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTT‑AATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCa           >  1:1197809/1‑140 (MQ=255)

                                                                                                                            aaTACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCat          <  2:1528479/140‑1 (MQ=255)

                                                                                                                             aTACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCata         >  2:296425/1‑140 (MQ=255)

                                                                                                                             aTACGCGTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCata         >  2:626225/1‑140 (MQ=255)

                                                                                                                                cgcgTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCg      >  2:1839994/1‑140 (MQ=255)

                                                                                                                                 acgTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCgg     >  1:1570032/2‑140 (MQ=255)

                                                                                                                                  cgTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCGGt    <  2:1503500/140‑1 (MQ=255)

                                                                                                                                  cgTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCGGt    >  2:559554/1‑140 (MQ=255)

                                                                                                                                  cgTAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCGGt    <  1:559554/140‑1 (MQ=255)

                                                                                                                                    tAAATCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCGGTaa  >  2:1220514/1‑140 (MQ=255)

GCCAAATAATACCGACCAGATAATGCTCCAGCGACTGTCATTGATCTGTTGGGTCACACGGCTTAACTCAAGGCCGATCGCCACCACGCCAATTTGTTTATGATTTTCATCGTAGATGGGGGTAAATACGCGTAAAGCCTGCGCCAGAAAACCGCGATTGATAGCGACATTTTCTTCGCCATTCAGCGCTTTAAGGATGTCATCACCTTTAAATGGCTGACCAATACGCTGGGCTTCAGGATGCGAGTAGCGAAGACTTTGCATATCGGTAA  >  NC_000913/4351093‑4351364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`