| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,001,918 | 0 | A | C | 32.8% | 110.3 / 23.6 | 61 | intergenic (‑129/+192) | fliA/fliC | RNA polymerase, sigma 28 (sigma F) factor/flagellar filament structural protein |
| Reads supporting (aligned to +/- strand): ref base A (37/4); new base C (0/20); total (37/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAG > NC_000913/2001779‑2002051 | agTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGaaaaaaa > 2:1420186/1‑140 (MQ=255) tGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑CTACAGGTAAATTCC‑AGGCAGAAAAAAAcc > 1:1229204/1‑140 (MQ=255) aaTTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAAcccc > 1:1023518/1‑140 (MQ=255) aaTTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAAcccc > 1:558320/1‑140 (MQ=255) aaTTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAAcccc > 2:62523/1‑140 (MQ=255) aTTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCcc‑g > 1:424193/1‑140 (MQ=255) aaaaaCAGCCCTGCTTTATATGATTTATCGGCATGATTATCCGTTTCGGCGGGGTTTTTAATGGGACGATTAGGGGGTGAAATGGGGGTTTTTTGGGGGG‑TTACAGGAAAATCCC‑AGGAAAAAAAAACCCCC‑GCCGGTgg < 2:902930/138‑1 (MQ=255) aCAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCggg > 2:1371038/1‑140 (MQ=255) cccTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAg > 2:1051387/1‑140 (MQ=255) ccTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGc > 1:375865/1‑140 (MQ=255) tGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCAc > 1:361155/1‑140 (MQ=255) gctttATAAGGGTTGTCGGCATGATTATCGGTTGCTGCGGGTTTTTAAATCGGCAGATGAGTGGTAAAAATGAGGGGTTTTTGGGGGT‑TTAGAGGTAAATCCA‑CGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACg < 2:1176212/137‑1 (MQ=255) ggTTATAGGGTTTAGCGGAATGATTATCCGTTTCTGCAGGGTTTTTAACCGGACGATTAGGGGGTAAATTGAGGGTTTTTTTGGGGG‑TTACAGGTAAGTCCC‑AGGCAGAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGt < 2:1229204/139‑1 (MQ=255) cGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGt > 1:1176212/1‑140 (MQ=255) tatGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTg > 1:1183969/1‑140 (MQ=255) tatGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTg > 1:1528619/1‑140 (MQ=255) tatGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTg < 1:639395/140‑1 (MQ=255) gTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACaaa > 2:275462/1‑140 (MQ=255) aTCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTg > 1:1391604/1‑140 (MQ=255) aTGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGGAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCttt > 1:1529022/1‑140 (MQ=255) acgttttCTGAAGTTTTTTAAAGGGGTCGTTTGGGGGGTAAAAGGGGGGTTTTTTTGGGGG‑TTA‑AGGTAAAATCCGAGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGc < 2:1576677/136‑1 (MQ=255) cGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCg > 1:988378/1‑140 (MQ=255) cGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCg > 1:433144/1‑140 (MQ=255) ttCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAt > 2:401852/1‑140 (MQ=255) ttCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAt > 1:394771/1‑140 (MQ=255) ttCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAt > 2:863309/1‑140 (MQ=255) tctgaggggTTTTTAATGGGACGATGGGGGGGTGAAATGGGGGGTTTTTGGGGGG‑TTACAGGAAAATTCC‑GGGAAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATg < 2:433144/134‑1 (MQ=255) tCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATg > 1:1243836/1‑140 (MQ=255) ttttttAAACGAGGGATTGGGGGGTAAAATGAGGGGTTATTGGGGGT‑TTACCTGCTCATTCA‑GGTTATAAAACACCCCC‑GCCGGTAGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTaa < 2:1529022/139‑1 (MQ=255) tttAATCGGATGATTGGGGGGTAAAATG‑GGGGTTTTTTGGGGGTTTACGGGTAATTCCC‑AGGAAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACg < 2:1431967/140‑1 (MQ=255) cGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTAt > 2:557751/1‑140 (MQ=255) ggACGTCTAGTGGGTAAAAGGGGGGTTTATTGGGGGT‑TTAGAGGTAAATTCC‑AGGCAAAAAAACCCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATc < 2:394771/140‑1 (MQ=37) ggACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATCCC‑AGGCAGAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATc < 1:712274/140‑1 (MQ=255) gACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATcc > 1:1430722/1‑140 (MQ=255) gACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATcc > 1:609917/1‑140 (MQ=255) aggATTAGTGGGTGAAATGGGGGGTTATTTGGGGG‑TTACAGGAAAATCCA‑AGGCAAAAAAAACCCCC‑GCCGGTGACGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCg < 2:821813/138‑1 (MQ=38) aCGATTAGTGGGTAAAATGAGGGTTTATTGGGGGG‑TTAAAGGAAAATCCC‑AGGAAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCg < 2:623708/140‑1 (MQ=38) aGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc > 1:1495667/1‑140 (MQ=255) ggTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaaa > 1:1562123/1‑140 (MQ=255) tGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAt > 1:789072/1‑140 (MQ=255) aaaTGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtgt > 1:230815/1‑140 (MQ=255) aTGGGGGGTTATTTGGGGT‑TTACAGAAAAATCCC‑AGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGc < 2:375865/140‑1 (MQ=37) aTGAGGGGTTATTGGGGGT‑TTAAAGGTAAATCCC‑AGGCAAAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGc < 1:1111861/140‑1 (MQ=38) gggTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAAtt > 1:106056/1‑140 (MQ=255) ttATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCaa > 1:139054/1‑140 (MQ=255) gggg‑TTACAGGTAAATTCC‑AGGAAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTg < 1:1051387/140‑1 (MQ=255) gg‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCa > 1:869512/1‑140 (MQ=255) gg‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCa > 2:381889/1‑140 (MQ=255) g‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCaa > 1:113212/1‑140 (MQ=255) ttACAGGTAAATTCG‑AGAAAAAAAAACCCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAAt < 2:1183969/140‑1 (MQ=37) aaaGGTAAATCCC‑AGGCAGAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTc < 2:609917/138‑1 (MQ=255) aaaGGTAAATCCC‑AGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTc < 2:1430722/138‑1 (MQ=255) aCAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTc > 1:1474046/1‑140 (MQ=255) cAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCa > 2:1473598/1‑140 (MQ=255) cAGGTAAATTCC‑AGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCa < 1:1268727/140‑1 (MQ=255) aaGGTAAATTCC‑GGGCACAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCa < 2:558320/139‑1 (MQ=255) aaaTTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTg < 1:1371038/140‑1 (MQ=255) aaaTTCC‑‑GGCTAAAAAAAACCCCAGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGCACGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAACTGCAATTCAACTTg < 2:1562123/140‑1 (MQ=25) tttCC‑AGGAAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTCGTa < 1:275462/139‑1 (MQ=37) cc‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGc < 2:789072/140‑1 (MQ=255) cc‑AGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGc < 1:98195/140‑1 (MQ=255) cc‑AGGCAAAAAAAACCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGc < 2:581953/140‑1 (MQ=255) ggCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTg > 2:253862/1‑140 (MQ=255) ggCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTg > 1:1362776/1‑140 (MQ=255) cAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGAt < 2:1495667/140‑1 (MQ=255) aaaaaaaaacCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGAt < 2:1474046/137‑1 (MQ=255) aaaaaaaCCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAag > 2:121597/1‑140 (MQ=255) | AGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGGG‑TTACAGGTAAATTCC‑AGGCAGAAAAAAACCCC‑GCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAG > NC_000913/2001779‑2002051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |