| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,061 | 0 | G | A | 35.0% | 85.4 / 34.9 | 60 | intergenic (‑124/+79) | ves/spy | HutD family protein Ves/ATP‑independent periplasmic chaperone |
| Reads supporting (aligned to +/- strand): ref base G (36/3); new base A (0/21); total (36/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.53e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTC > NC_000913/1824923‑1825197 | atCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGagaaaaga > 1:22685/1‑140 (MQ=255) aGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑Acc > 1:371313/1‑140 (MQ=255) ttATTCCATCCCCCCCCCCGCCCCTTTTTTTTCATTGTTATGGTTCAGTTACCCGTGGATGTTTAGCGGCAATTGGGGTGATTTACGTTGGTGTTGATCAGCTTTTTTTT‑ACAACTGTTTGAAAAGAAAAAAAAAA‑Accg < 2:2032572/139‑1 (MQ=255) tATTCCATCCTCGCCCCCGGCCCGTTTTTTTCATTGTTATCGTTAAGGTACCCGTGGATGTTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTT‑ACAATTGTTTGAAAAAAAAAAAAAAA‑Accgc < 2:2184944/140‑1 (MQ=255) tATTCCATCCTCGCCCCCGCCCCGTTTTTTTCATTTTTATCGTTCAGGTACCCGTGGATGTTTATCGACACCTGGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTT‑ACACCTGTTTAAAAAAAAAAAAAAAA‑Accgc < 2:22685/140‑1 (MQ=255) cATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATc > 1:758068/1‑140 (MQ=255) aCTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTg > 2:359247/1‑140 (MQ=255) tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑Actg > 2:886815/1‑127 (MQ=255) tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑Actg < 1:886815/129‑3 (MQ=255) tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTc > 2:2109756/1‑140 (MQ=255) tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTc > 1:2234859/1‑140 (MQ=255) tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTc > 1:2421492/1‑140 (MQ=255) gCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTTTCGCCAACTCGGGTGATTTACGTTAGTGGTAATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCa < 2:2124840/140‑1 (MQ=255) gCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCa > 2:153898/1‑140 (MQ=255) gCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCa > 1:858330/1‑140 (MQ=255) acTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCa > 1:703066/2‑140 (MQ=255) cccccGCCCCGTTCTTTTCTTTTTTATCTTTCAGGTACCCGTGGATGTTTATCGGCAACTGGGGTGTTTTACGTTAGTGGTGATCAGGTTTTTTTT‑ACAATTTTTTGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCAc < 2:703066/138‑1 (MQ=255) cTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCAc > 1:384635/1‑140 (MQ=255) cGGCCTGTTTTTTTCTTTTTTTTCGTTAAGGTACCGGTGGTTGGTTATCGGCAACTGGGGTGTTTTACTTTGGTGGTGATAAGTTTTTTTTT‑ACAATTTTTGGAGAAAAGAAAAAAAA‑ACCGCCGATCCTGTCCACCGCa < 2:128696/140‑1 (MQ=255) ggCCCTTTTTTTTCTTTTTTATCGTTGAGGTACCGGTGGATGGTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTT‑ACATTTTTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCAt < 2:2234859/140‑1 (MQ=255) cccTTTTTTTTTTTTTTTATCTTTCAGGTAACGGTGGATGTTTATCGGCAACTGGGGTGATTTACTTTAGTGGTGATCAGTTTTTTTTT‑ACATCTGTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTa < 2:1008881/140‑1 (MQ=255) cccTTTTTTTTCATTTTTATCTTTCAGGTAACCGTGGATGGTTATCGGCAACTGGGGTTTTTTCCGTTAGGGGTGATCAGTTTTTTTTT‑AAATCTGTTAGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTa < 2:1758260/140‑1 (MQ=255) ttCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGc > 1:2056031/1‑140 (MQ=255) ttCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGc > 1:2407685/1‑140 (MQ=255) tttttttatttttaTCGTTCAGGTACCCGTGGGTGTTTTGCGGCAACTGGGGTGATTTACGTTGGTGGTGAACGGGTTTTTTTA‑ACAACTGTTAAAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCa < 2:2407685/138‑1 (MQ=255) tcttttttATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTT‑ACAATTTTTTGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTa < 2:119747/134‑1 (MQ=255) ttATCGTTCAGGTAACCGTGGATGTTTACCGGCACCTGGGGTGTTTTACTTTAGTGGTAACAGGGTTTTTTTT‑AAAATTGTTTGAGAAAAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGAc < 2:858330/140‑1 (MQ=255) aTCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGCTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACaa > 2:2355991/1‑140 (MQ=255) ttCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGAcc > 1:1639852/1‑140 (MQ=255) cAGGTACCCGTGGATGGTTATCGCCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTT‑ACAACTGTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg < 2:101274/140‑1 (MQ=255) cAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTT‑ACAACTTTTTGAAAAGAAAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg < 2:2293095/140‑1 (MQ=255) aCCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCt > 1:2394139/1‑140 (MQ=255) ggTGGTTGGTTATCGGCACCTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTT‑ACAATTTTTTGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTa < 2:1972090/139‑1 (MQ=255) tGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAg > 1:782842/1‑140 (MQ=255) aTGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGA‑CGGCGGTCTTAAGtttt > 1:449545/1‑140 (MQ=255) tATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTgg > 1:1326357/1‑140 (MQ=255) tATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTgg > 1:1972090/1‑140 (MQ=255) aTCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGGCTTTAATTTTTTGGc > 2:2474889/1‑140 (MQ=255) cgccAACTGGGGTATTTTACTTTAGTGGTGATCAGTTTTTTTTT‑AAAATTTTTTAAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg < 2:782842/137‑1 (MQ=255) cctggggTGATTTACGTTAGTGGTGATCGGTTTTTTTTT‑ACAATTGTTTAAAAAAAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGa < 2:2394139/136‑1 (MQ=255) cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat > 2:84794/1‑140 (MQ=255) ggggTGTTTTAGTTTAGGGGTGTTCAGGTTTTTTTT‑ACAACGGTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 2:758068/139‑1 (MQ=255) ggggTGATTTGCTTTTGTGGTGATCGGATTTTTTTT‑AAATCTGTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 1:1420981/139‑1 (MQ=255) ggggTGATTTACTTTAGTGGTGATCAGGTTTTTTTT‑ACAACTGTTAGAGAAAAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 1:1307271/139‑1 (MQ=255) ttatgtggtgAT‑AGGATTTTTTTAACAATTGTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGc < 1:2109756/136‑1 (MQ=255) ttgggggtgATCGGTTTTTTTTT‑ACAATTGTTTAAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 2:1326357/135‑1 (MQ=255) ttAGTGGTGATCAGGTTTTTTTA‑ACAACTTTTTGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 2:1639852/140‑1 (MQ=255) ttAGTGGTAATCAGTTTTTTTTT‑ACAACTTTTTGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 1:1324130/140‑1 (MQ=255) aGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGCTgtctc > 1:364772/1‑136 (MQ=255) gtggtgATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGc > 1:311316/1‑140 (MQ=255) aTCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTTTTCAGGTTTTTGGCCGGAAGATTATTGACCAGTTGGAGGCATTTTa > 2:1085781/1‑140 (MQ=255) aTCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa > 2:1479421/1‑140 (MQ=255) aTCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa > 2:127752/1‑140 (MQ=255) ggCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtt > 2:1982326/1‑140 (MQ=255) gCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt > 2:1956703/1‑140 (MQ=255) gCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt > 2:874460/1‑140 (MQ=255) tttttt‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGc > 1:735590/1‑140 (MQ=255) tttt‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCg > 2:204141/1‑140 (MQ=255) aCTGTTT‑AAAAGAGAAAAAAAAGGCCGCCGATCCTGTCCGCCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACg < 1:2474889/140‑1 (MQ=255) tGTTGGAAAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGtt < 2:2406673/140‑1 (MQ=255) tttGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt > 1:1956660/1‑140 (MQ=255) aaaaaaaaaaaa‑aCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGA‑CGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACg < 2:449545/136‑1 (MQ=255) gagaaAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAGACg > 2:1503857/1‑140 (MQ=255) gagaaAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACg > 1:2130124/1‑140 (MQ=255) gagaaAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACg > 2:875445/1‑140 (MQ=255) gaaaagaaa‑aCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGGCTTAAGGTTTTTGGGTGGAAAATTATTCAACAGTTGCAGGCATTTTTACTTTTGCCGCCGGCCGTTCTTTCTGACGCt > 2:1859637/1‑140 (MQ=255) aaaaaaa‑aCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtc < 1:204141/140‑1 (MQ=255) | ATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTT‑ACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTC > NC_000913/1824923‑1825197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |