BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,254,389	C→A	E522* (GAG→TAG)	ycgV ←	putative autotransporter adhesin YcgV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,254,389	0	C	A	100.0%	461.9 / NA	129	E522* (GAG→TAG)	ycgV	putative autotransporter adhesin YcgV
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (81/48); total (81/48)

Only 100 of 130 total aligned reads displayed.

CTGGTTGCGGATAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTCTACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCAACGTCC  >  NC_000913/1254252‑1254522

cTGGTTGCGGATAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCtata                                                                                                                                     >  2:1546696/1‑140 (MQ=255)

    ttGCGGATAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGtt                                                                                                                                 >  1:1264234/1‑140 (MQ=255)

        ggATAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAAt                                                                                                                             <  2:667796/140‑1 (MQ=255)

          aTAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTaa                                                                                                                              <  1:51922/137‑1 (MQ=255)

          aTAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTaa                                                                                                                              >  2:51922/1‑137 (MQ=255)

             gCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGc                                                                                                                        >  1:1654180/1‑140 (MQ=255)

              ccAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCa                                                                                                                       >  1:1662968/1‑140 (MQ=255)

                 aTACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAAt                                                                                                                    <  1:1250772/140‑1 (MQ=255)

                  tACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAAtg                                                                                                                   >  1:2028476/1‑140 (MQ=255)

                                cACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGAc                                                                                                     >  1:2443494/1‑140 (MQ=255)

                                 actactCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGAcc                                                                                                    <  2:280614/140‑1 (MQ=255)

                                     ctCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGtg                                                                                                >  2:2500656/1‑140 (MQ=255)

                                         cGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGtggctg                                                                                            <  2:279044/140‑1 (MQ=255)

                                         cGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGtggctg                                                                                            >  1:2344422/1‑140 (MQ=255)

                                         cGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCAGCAGTTGACCCGtggctg                                                                                            <  2:1880139/140‑1 (MQ=255)

                                          gCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGtggctgg                                                                                           >  2:5667/1‑140 (MQ=255)

                                           cTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGtggctggc                                                                                          <  2:268248/140‑1 (MQ=255)

                                             gATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCaa                                                                                        >  1:165302/1‑140 (MQ=255)

                                               tatTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCaaaa                                                                                      >  2:77886/1‑140 (MQ=255)

                                               tatTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCaaaa                                                                                      >  1:1367913/1‑140 (MQ=255)

                                                 ttCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATc                                                                                    <  1:1546696/140‑1 (MQ=255)

                                                  tCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCg                                                                                   >  2:209613/1‑140 (MQ=255)

                                                   cAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGa                                                                                  <  1:690350/140‑1 (MQ=255)

                                                      tAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAg                                                                               <  1:2500656/140‑1 (MQ=255)

                                                           ccccTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGaa                                                                          >  1:1758008/1‑140 (MQ=255)

                                                                    tattaACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAgc                                                                 >  2:1991124/1‑140 (MQ=255)

                                                                        aaCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCa                                                             <  2:2433075/140‑1 (MQ=255)

                                                                        aaCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCa                                                             >  1:1888615/1‑140 (MQ=255)

                                                                        aaCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCa                                                             >  2:2205081/1‑140 (MQ=255)

                                                                        aaCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCa                                                             >  1:2004366/1‑140 (MQ=255)

                                                                        aaCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCa                                                             >  1:1717419/1‑140 (MQ=255)

                                                                        aaCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCa                                                             >  1:1239313/1‑140 (MQ=255)

                                                                         aCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAg                                                            >  1:1174087/1‑140 (MQ=255)

                                                                         aCGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGGACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAg                                                            >  1:1993211/1‑140 (MQ=255)

                                                                           gCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCg                                                          >  1:739956/1‑140 (MQ=255)

                                                                           gCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGC‑AAATCGACAGTTGAATGGCTCAGCGCCAGCgt                                                         >  1:813102/1‑140 (MQ=255)

                                                                            ccATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCgt                                                         >  1:2389113/1‑140 (MQ=255)

                                                                             cATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCgtg                                                        >  2:423096/1‑140 (MQ=255)

                                                                               ttACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGTCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTc                                                      <  2:1654180/140‑1 (MQ=255)

                                                                                    cTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGAt                                                 <  2:2004366/140‑1 (MQ=255)

                                                                                     tCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGAtt                                                <  2:2344422/140‑1 (MQ=255)

                                                                                     tCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGAtt                                                >  2:718843/1‑140 (MQ=255)

                                                                                      cGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTa                                               >  1:1438762/1‑140 (MQ=255)

                                                                                       gCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCgtgt                                                       <  1:412597/131‑1 (MQ=255)

                                                                                       gCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCgtgt                                                       >  2:2461493/1‑131 (MQ=255)

                                                                                       gCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAg                                              >  1:1563258/1‑140 (MQ=255)

                                                                                       gCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAg                                              >  2:1818019/1‑140 (MQ=255)

                                                                                       gCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAg                                              >  1:212774/1‑140 (MQ=255)

                                                                                        ccAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGa                                             >  2:593420/1‑140 (MQ=255)

                                                                                          aacaacATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAAt                                           <  2:2389113/140‑1 (MQ=255)

                                                                                          aacaacATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAAt                                           >  1:520787/1‑140 (MQ=255)

                                                                                          aacaacATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAAt                                           >  2:174654/1‑140 (MQ=255)

                                                                                          aacaacATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAAt                                           <  2:1717419/140‑1 (MQ=255)

                                                                                            caacaTCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTa                                         >  1:1207756/1‑140 (MQ=255)

                                                                                                 tCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGt                                    >  1:2167143/1‑140 (MQ=255)

                                                                                                 tCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGt                                    >  1:1344220/1‑140 (MQ=255)

                                                                                                   aGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTa                                  <  1:423096/140‑1 (MQ=255)

                                                                                                       cGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGtt                              >  2:1403094/1‑140 (MQ=255)

                                                                                                       cGCATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGtt                              >  2:1716606/1‑140 (MQ=255)

                                                                                                         cATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGTAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGt                                    >  2:2031807/1‑132 (MQ=255)

                                                                                                         cATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGTAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGt                                    <  1:2031807/132‑1 (MQ=255)

                                                                                                         cATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTcc                            >  1:802415/1‑140 (MQ=255)

                                                                                                         cATAATAAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTcc                            >  2:1645784/1‑140 (MQ=255)

                                                                                                          ataataAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCa                           <  1:1986089/140‑1 (MQ=255)

                                                                                                          ataataAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCa                           <  2:520787/140‑1 (MQ=255)

                                                                                                          ataataAAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCa                           >  1:1064658/1‑140 (MQ=255)

                                                                                                            aataaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGa                         <  1:356823/140‑1 (MQ=255)

                                                                                                            aataaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGa                         <  1:593420/140‑1 (MQ=255)

                                                                                                            aataaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGa                         <  1:2161480/140‑1 (MQ=255)

                                                                                                            aataaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGa                         >  1:714945/1‑140 (MQ=255)

                                                                                                            aataaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGa                         <  2:1563258/140‑1 (MQ=255)

                                                                                                            aataaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGAGTGTCGAGATTAGAATTACTTGTTACGTTCCAGa                         <  1:209613/140‑1 (MQ=255)

                                                                                                              taaAGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGGCGAGATTAGAATTACTTGTTACGTTCCAGACg                       <  1:1485839/140‑1 (MQ=255)

                                                                                                                 aGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTg                    <  2:1174087/140‑1 (MQ=255)

                                                                                                                 aGGTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTg                    >  1:2484647/1‑140 (MQ=255)

                                                                                                                  ggTACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGt                   >  2:47084/1‑140 (MQ=255)

                                                                                                                    tACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTa                 >  1:1073171/1‑140 (MQ=255)

                                                                                                                    tACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTa                 >  2:222702/1‑140 (MQ=255)

                                                                                                                    tACTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTa                 >  2:1167093/1‑140 (MQ=255)

                                                                                                                      cTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTAtt               >  2:2102566/1‑140 (MQ=255)

                                                                                                                      cTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTAtt               >  2:2387126/1‑140 (MQ=255)

                                                                                                                      cTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTAtt               >  1:42307/1‑140 (MQ=255)

                                                                                                                      cTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTAtt               >  1:1878953/1‑140 (MQ=255)

                                                                                                                      cTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTAtt               >  1:770614/1‑140 (MQ=255)

                                                                                                                      cTGTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTAtt               >  1:992076/1‑140 (MQ=255)

                                                                                                                        gTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCa             >  1:2183543/1‑140 (MQ=255)

                                                                                                                        gTTACCGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCa             >  2:578449/1‑140 (MQ=255)

                                                                                                                            ccGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGc         >  2:1377916/1‑140 (MQ=255)

                                                                                                                             cGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCa        >  2:1244561/1‑140 (MQ=255)

                                                                                                                             cGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCa        <  1:65251/140‑1 (MQ=255)

                                                                                                                             cGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCa        <  2:1878953/140‑1 (MQ=255)

                                                                                                                             cGCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCa        >  1:1802062/1‑140 (MQ=255)

                                                                                                                              gCTCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCaa       >  1:42879/1‑140 (MQ=255)

                                                                                                                                tCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCa             >  1:2171052/1‑132 (MQ=255)

                                                                                                                                tCAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCa             <  2:2171052/132‑1 (MQ=255)

                                                                                                                                 cAGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCAACGt    >  2:1927065/1‑140 (MQ=255)

                                                                                                                                  aGGTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCAACGTc   <  1:1377916/140‑1 (MQ=255)

                                                                                                                                   ggTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCa        >  1:1978115/1‑134 (MQ=255)

                                                                                                                                   ggTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCa        <  2:1978115/134‑1 (MQ=255)

                                                                                                                                   ggTTCTATACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCAACGTcc  >  2:2494477/1‑140 (MQ=255)

CTGGTTGCGGATAGCCAATACGTGATTACCAGCACTACTCCCGCTGATATTCAATAAATCCCCTTTATTATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTCTACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCAACGTCC  >  NC_000913/1254252‑1254522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`