BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,527,021	C→A	H28N (CAC→AAC)	yncH →	DUF5445 domain‑containing protein YncH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,527,021	0	C	A	100.0%	494.7 / NA	137	H28N (CAC→AAC)	yncH	DUF5445 domain‑containing protein YncH
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (71/66); total (71/66)

Only 100 of 139 total aligned reads displayed.

TGTTATTTATTATTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTCACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAGG  >  NC_000913/1526884‑1527156

tGTTATTTATTATTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTaac                                                                                                                                       >  2:2144468/1‑140 (MQ=255)

     tttattATTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGt                                                                                                                                  <  2:2049095/140‑1 (MQ=255)

      ttattaTTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTg                                                                                                                                 >  1:1029066/1‑140 (MQ=255)

       tattatTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGc                                                                                                                                <  1:54139/140‑1 (MQ=255)

       tattatTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGc                                                                                                                                >  1:940198/1‑140 (MQ=255)

          tattCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGa                                                                                                                             <  1:350385/140‑1 (MQ=255)

          tattCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGa                                                                                                                             >  1:779477/1‑140 (MQ=255)

          tattCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGa                                                                                                                             <  2:1369106/140‑1 (MQ=255)

           attCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGAt                                                                                                                            >  1:1760977/1‑140 (MQ=255)

            ttCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATg                                                                                                                           >  1:474111/1‑140 (MQ=255)

               aGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGttt                                                                                                                        >  2:1777462/1‑140 (MQ=255)

               aGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGttt                                                                                                                        <  2:49360/140‑1 (MQ=255)

               aGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGttt                                                                                                                        >  1:706814/1‑140 (MQ=255)

                 tAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCa                                                                                                                      <  2:1744496/140‑1 (MQ=255)

                 tAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCa                                                                                                                      >  2:1726989/1‑140 (MQ=255)

                 tAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCa                                                                                                                      >  2:2508186/1‑140 (MQ=255)

                 tAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCa                                                                                                                      >  2:518391/1‑140 (MQ=255)

                 tAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCa                                                                                                                      >  1:998529/1‑140 (MQ=255)

                  aaCTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAg                                                                                                                     <  2:100472/140‑1 (MQ=255)

                  aaCTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAg                                                                                                                     <  1:2508186/140‑1 (MQ=255)

                       tATCCACAATGATGGGCGTACTTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAgttgtt                                                                                                                >  1:2173387/1‑140 (MQ=255)

                       tATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAgttgtt                                                                                                                <  2:1494462/140‑1 (MQ=255)

                         tCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTAt                                                                                                              <  2:1401837/140‑1 (MQ=255)

                         tCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTAt                                                                                                              <  2:1909711/140‑1 (MQ=255)

                            acaATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATcac                                                                                                           <  2:576436/140‑1 (MQ=255)

                             caATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATcaca                                                                                                          >  2:165981/1‑140 (MQ=255)

                              aaTGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAg                                                                                                         >  2:601711/1‑140 (MQ=255)

                              aaTGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAg                                                                                                         >  1:863876/1‑140 (MQ=255)

                                   tgGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCAtt                                                                                                    >  1:825453/1‑140 (MQ=255)

                                          aattaattAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAAt                                                                                             >  2:1961750/1‑140 (MQ=255)

                                          aattaattAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAAt                                                                                             >  2:510837/1‑140 (MQ=255)

                                              aattaaATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCa                                                                                         >  2:617586/1‑140 (MQ=255)

                                               attaaATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCaa                                                                                        >  1:2487553/1‑140 (MQ=255)

                                               attaaATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCaa                                                                                        >  2:356722/1‑140 (MQ=255)

                                                ttaaATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCaaa                                                                                       <  1:1961750/140‑1 (MQ=255)

                                                ttaaATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCaaa                                                                                       <  1:2425834/140‑1 (MQ=255)

                                                ttaaATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAATTGTTATCACAGGCATTCTATAATCTCaaa                                                                                       >  1:1172295/1‑140 (MQ=255)

                                                   aaTTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATg                                                                                    <  1:165981/140‑1 (MQ=255)

                                                   aaTTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATg                                                                                    <  2:2172043/140‑1 (MQ=255)

                                                          ggTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTaa                                                                             <  2:1760977/140‑1 (MQ=255)

                                                          ggTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTaa                                                                             >  1:141145/1‑140 (MQ=255)

                                                            tATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatg                                                                           <  1:97012/140‑1 (MQ=255)

                                                            tATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatg                                                                           <  1:1726989/140‑1 (MQ=255)

                                                             aTGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatga                                                                          <  1:2280478/140‑1 (MQ=255)

                                                             aTGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatga                                                                          <  2:2487553/140‑1 (MQ=255)

                                                              tGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatgat                                                                         >  1:2341586/1‑140 (MQ=255)

                                                              tGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatgat                                                                         >  1:772624/1‑140 (MQ=255)

                                                                  ttttAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGat                                                                     >  2:2418131/1‑140 (MQ=255)

                                                                  ttttAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGat                                                                     <  1:2378454/140‑1 (MQ=255)

                                                                  ttttAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGat                                                                     <  1:1253704/140‑1 (MQ=255)

                                                                    ttAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatg                                                                           >  2:903882/1‑132 (MQ=255)

                                                                      aaTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAatg                                                                           >  2:2363173/1‑130 (MQ=255)

                                                                      aaTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGc                                                                 >  1:91431/1‑140 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  2:1708918/140‑1 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  2:1868248/140‑1 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  1:1533340/140‑1 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  1:601711/140‑1 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  2:141145/140‑1 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  2:91431/140‑1 (MQ=255)

                                                                       aTTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  1:1777462/140‑1 (MQ=255)

                                                                        tttATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTc                                                               <  1:1005208/140‑1 (MQ=255)

                                                                                 ctctCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGga                                                      <  2:1113480/140‑1 (MQ=255)

                                                                                 ctctCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGga                                                      >  2:738871/1‑140 (MQ=255)

                                                                                 ctctCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGga                                                      >  2:1731402/1‑140 (MQ=255)

                                                                                 ctctCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGga                                                      >  1:1221623/1‑140 (MQ=255)

                                                                                  tctcCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                <  2:2271939/129‑1 (MQ=255)

                                                                                  tctcCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCt                                                                >  1:2271939/1‑129 (MQ=255)

                                                                                  tctcCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGgag                                                     <  1:82156/140‑1 (MQ=255)

                                                                                    tcCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGAt                                                   >  1:2319599/1‑140 (MQ=255)

                                                                                         ttcattcaGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAat                                              >  1:2102213/1‑140 (MQ=255)

                                                                                          tcattcaGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAatt                                             <  1:2280464/140‑1 (MQ=255)

                                                                                          tcattcaGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAatt                                             <  2:2255269/140‑1 (MQ=255)

                                                                                            attcaGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaa                                           >  1:22162/1‑140 (MQ=255)

                                                                                              tcaGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaata                                         >  1:2494811/1‑140 (MQ=255)

                                                                                              tcaGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaata                                         >  2:363254/1‑140 (MQ=255)

                                                                                                aGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatatt                                       >  2:1566187/1‑140 (MQ=255)

                                                                                                aGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatatt                                       >  1:384577/1‑140 (MQ=255)

                                                                                                aGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatatt                                       >  1:87712/1‑140 (MQ=255)

                                                                                                  cGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatattaa                                     >  1:1562044/1‑140 (MQ=255)

                                                                                                  cGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatattaa                                     >  2:466331/1‑140 (MQ=255)

                                                                                                  cGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatattaa                                     >  2:708221/1‑140 (MQ=255)

                                                                                                   gtgtCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAattaatattaat                                    <  2:2341586/140‑1 (MQ=255)

                                                                                                    tgtCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAAttaatattaata                                   <  1:617586/140‑1 (MQ=255)

                                                                                                    tgtCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAAttaatattaata                                   >  2:1596615/1‑140 (MQ=255)

                                                                                                    tgtCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAATTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAAttaatattaata                                   <  2:1172295/140‑1 (MQ=255)

                                                                                                      tCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATg                                                  <  2:1322754/123‑1 (MQ=255)

                                                                                                      tCTATTTCATTTCCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACa                                 >  1:2180174/1‑140 (MQ=255)

                                                                                                                ttcCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAata                       >  2:260127/1‑140 (MQ=255)

                                                                                                                ttcCTCTGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAata                       >  2:2153839/1‑140 (MQ=255)

                                                                                                                    tctGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCg                   >  1:89362/1‑140 (MQ=255)

                                                                                                                     ctGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCgg                  <  2:474111/140‑1 (MQ=255)

                                                                                                                     ctGAAAAGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCgg                  <  1:34254/140‑1 (MQ=255)

                                                                                                                        aaaaGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAg               <  2:937471/140‑1 (MQ=255)

                                                                                                                         aaaGAAACTAACTATTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAgg              <  1:2168346/140‑1 (MQ=255)

                                                                                                                                 taactaTTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTaa      <  2:87712/140‑1 (MQ=255)

                                                                                                                                  aactaTTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTaaa     <  1:1975946/140‑1 (MQ=255)

                                                                                                                                  aactaTTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTaaa     <  1:509739/140‑1 (MQ=255)

                                                                                                                                  aactaTTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTaaa     <  2:951788/140‑1 (MQ=255)

                                                                                                                                    ctaTTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAg   >  1:1100751/1‑140 (MQ=255)

                                                                                                                                     taTTAACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAgg  <  1:1405406/140‑1 (MQ=255)

TGTTATTTATTATTCAGTAACTTTATCCACAATGATGGGCGTAATTAATTAAATTCATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTCACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAGG  >  NC_000913/1526884‑1527156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`