BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,535,867	Δ1 bp	coding (34/510 nt)	crr →	Enzyme IIA(Glc)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,535,865	0	T	.	100.0%	496.7 / NA	114	coding (32/510 nt)	crr	Enzyme IIA(Glc)
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (51/63); total (51/63)

Only 100 of 121 total aligned reads displayed.

AACCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGGTTTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCAAC  >  NC_000913/2535729‑2536000

aaCCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGGttcc                                                                                                                                      >  2:463383/1‑138 (MQ=255)

aaCCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGGttcc                                                                                                                                      >  2:700727/1‑138 (MQ=255)

aaCCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGGttcc                                                                                                                                      >  1:1358763/1‑138 (MQ=255)

  ccGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGGttccga                                                                                                                                    <  1:1671221/140‑5 (MQ=255)

    gACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCcgacg                                                                                                                                 <  2:1358763/140‑1 (MQ=255)

    gACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCcgacg                                                                                                                                 <  2:501116/140‑1 (MQ=255)

      cAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCgacgac                                                                                                                               <  1:402836/140‑1 (MQ=255)

      cAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCAGCCCAATTTACTGCTTAGGAGACGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCgacaac                                                                                                                               <  2:1725831/140‑1 (MQ=255)

          ggACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACaaga                                                                                                                           <  2:631575/140‑1 (MQ=255)

            aCGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCgacgac                                                                                                                               >  2:736040/1‑134 (MQ=255)

            aCGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCgacgac                                                                                                                               <  1:736040/134‑1 (MQ=255)

            aCGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACaagaag                                                                                                                         <  2:1514893/140‑1 (MQ=255)

            aCGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACaagaag                                                                                                                         >  1:852938/1‑140 (MQ=255)

            aCGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACaagaag                                                                                                                         <  1:1240722/140‑1 (MQ=255)

                 ttAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATAc                                                                                                                    <  2:2185078/140‑1 (MQ=255)

                    aTGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCgg                                                                                                                 <  2:653280/140‑1 (MQ=255)

                      gACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGaa                                                                                                               <  2:1138258/140‑1 (MQ=255)

                      gACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGaa                                                                                                               <  1:1234324/140‑1 (MQ=255)

                      gACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGaa                                                                                                               <  1:465424/140‑1 (MQ=255)

                        cGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCgg                                                                                                                 <  1:1566352/136‑1 (MQ=255)

                        cGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCgg                                                                                                                 >  2:1566352/1‑136 (MQ=255)

                         gCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTa                                                                                                            >  1:2017481/1‑140 (MQ=255)

                          cTGGTTAACGAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAt                                                                                                           >  2:1927909/1‑140 (MQ=255)

                          cTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAt                                                                                                           >  1:1199158/1‑140 (MQ=255)

                          cTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAt                                                                                                           >  2:1933945/1‑140 (MQ=255)

                          cTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAt                                                                                                           >  1:160645/1‑140 (MQ=255)

                          cTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAt                                                                                                           >  2:783673/1‑140 (MQ=255)

                           tGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGaa                                                                                                               <  2:140779/135‑1 (MQ=255)

                           tGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGaa                                                                                                               >  1:140779/1‑135 (MQ=255)

                           tGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAtt                                                                                                          >  2:373167/1‑140 (MQ=255)

                           tGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTAtt                                                                                                          <  2:1158664/140‑1 (MQ=255)

                             gTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTga                                                                                                        <  2:1853017/140‑1 (MQ=255)

                             gTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTga                                                                                                        <  1:700727/140‑1 (MQ=255)

                             gTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTga                                                                                                        <  2:755788/140‑1 (MQ=255)

                                  cAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCa                                                                                                   <  1:2013646/140‑1 (MQ=255)

                                   aaGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCAt                                                                                                  >  1:315674/1‑140 (MQ=255)

                                     gTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTg                                                                                                >  2:2182475/1‑140 (MQ=255)

                                      ttCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTTCTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGc                                                                                               >  2:1553232/1‑140 (MQ=255)

                                       tCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCt                                                                                              <  2:1759373/140‑1 (MQ=255)

                                       tCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCt                                                                                              >  2:2095138/1‑140 (MQ=255)

                                       tCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCt                                                                                              <  2:1199158/140‑1 (MQ=255)

                                       tCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TCCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCt                                                                                              <  2:2250546/140‑1 (MQ=255)

                                       tCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGATTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGcc                                                                                              >  2:1605196/1‑139 (MQ=255)

                                             aagaaAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGctc                                                                                        >  2:1402716/1‑140 (MQ=255)

                                             aagaaAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGctc                                                                                        <  2:2056722/140‑1 (MQ=255)

                                                 aaaaaCAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTAGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTg                                                                                    <  2:1949262/140‑1 (MQ=255)

                                                    aaCAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCg                                                                                 <  1:1318638/140‑1 (MQ=255)

                                                      cAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCgag                                                                               <  2:1360048/140‑1 (MQ=255)

                                                      cAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCgag                                                                               <  2:916283/140‑1 (MQ=255)

                                                      cAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCgag                                                                               <  1:1927909/140‑1 (MQ=255)

                                                           tGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGt                                                                          <  1:1933945/140‑1 (MQ=255)

                                                            gCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTc                                                                         <  1:232616/140‑1 (MQ=255)

                                                             cTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCa                                                                        <  2:160645/140‑1 (MQ=255)

                                                                     cGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGaa                                                                >  1:318420/1‑140 (MQ=255)

                                                                      gagaTGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAg                                                               <  2:1765765/140‑1 (MQ=255)

                                                                       agaTGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGa                                                              <  2:260645/140‑1 (MQ=255)

                                                                       agaTGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGa                                                              <  2:2140712/140‑1 (MQ=255)

                                                                           gCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTg                                                          >  1:465539/1‑140 (MQ=255)

                                                                              gCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCg                                                       <  1:373167/140‑1 (MQ=255)

                                                                                      tACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGt                                               >  2:1945663/1‑140 (MQ=255)

                                                                                         tGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGtttt                                            >  2:2177518/1‑140 (MQ=255)

                                                                                          gCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGttttt                                           >  2:2054394/1‑140 (MQ=255)

                                                                                           cTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTg                                          <  1:252762/140‑1 (MQ=255)

                                                                                            ttAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGc                                         <  1:431511/140‑1 (MQ=255)

                                                                                            ttAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGc                                         <  1:171907/140‑1 (MQ=255)

                                                                                            ttAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGc                                         <  1:2182475/140‑1 (MQ=255)

                                                                                            ttAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGc                                         <  2:1955553/140‑1 (MQ=255)

                                                                                             tAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCg                                        >  1:1373905/1‑140 (MQ=255)

                                                                                              aGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCgg                                       >  2:1579834/1‑140 (MQ=255)

                                                                                              aGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCgg                                       >  1:198969/1‑140 (MQ=255)

                                                                                              aGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCgg                                       >  1:1325109/1‑140 (MQ=255)

                                                                                              aGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCgg                                       >  1:1247553/1‑140 (MQ=255)

                                                                                                gagaAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGaa                                     <  2:1373905/140‑1 (MQ=255)

                                                                                                     gaTCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAAt                                >  2:358486/1‑140 (MQ=255)

                                                                                                       tCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCg                              <  2:2017481/140‑1 (MQ=255)

                                                                                                       tCATGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCg                              <  1:1553232/140‑1 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  1:1127150/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  2:903707/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  2:758853/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  1:1479251/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  2:1452325/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  2:1006992/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  1:2119914/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  2:1740917/1‑140 (MQ=255)

                                                                                                          tGGGTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTg                           >  1:2026877/1‑140 (MQ=255)

                                                                                                           gggTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTgg                          <  2:246509/140‑1 (MQ=255)

                                                                                                            ggTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGt                         <  2:852938/140‑1 (MQ=255)

                                                                                                            ggTTTGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGt                         <  1:1932408/140‑1 (MQ=255)

                                                                                                                tGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGaag                     >  2:1000301/1‑138 (MQ=255)

                                                                                                                tGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATg                     >  1:1868313/1‑140 (MQ=255)

                                                                                                                tGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATg                     >  2:1649029/1‑140 (MQ=255)

                                                                                                                tGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATg                     >  2:1495212/1‑140 (MQ=255)

                                                                                                                tGTTCGATAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATg                     >  1:947805/1‑140 (MQ=255)

                                                                                                                       tAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGc              >  2:433444/1‑140 (MQ=255)

                                                                                                                       tAAACTGAAATCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGc              >  2:2028138/1‑140 (MQ=255)

                                                                                                                               aaTCTCTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAAc      <  2:1073863/140‑1 (MQ=255)

                                                                                                                                 tctcTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCa    <  2:1247553/140‑1 (MQ=255)

                                                                                                                                 tctcTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCa    <  1:2212090/140‑1 (MQ=255)

                                                                                                                                 tctcTGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGGTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCa    <  2:1127150/140‑1 (MQ=255)

                                                                                                                                   tctGG‑TTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCAAc  <  2:863600/140‑1 (MQ=255)

AACCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAATCCACGAGATGCGGCCCAATTTACTGCTTAGGAGAAGATCATGGGTTTGTTCGATAAACTGAAATCTCTGGTTTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCAAC  >  NC_000913/2535729‑2536000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`