| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,881,332 | C→A | A271S (GCC→TCC) | casC ← | type I‑E CRISPR system Cascade subunit CasC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,881,332 | 0 | C | A | 99.3% | 544.0 / ‑3.2 | 151 | A271S (GCC→TCC) | casC | type I‑E CRISPR system Cascade subunit CasC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (73/77); total (74/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 154 total aligned reads displayed.
TATTGATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGCATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCATAACGATA > NC_000913/2881199‑2881470 | tatTGATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGt > 2:1562493/1‑140 (MQ=255) tGATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACg < 2:2249548/140‑1 (MQ=255) gATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGc > 2:94220/1‑140 (MQ=255) gATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGc > 1:1284142/1‑140 (MQ=255) gATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGc > 1:1006248/1‑140 (MQ=255) gATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACATTTACCATATCCGCAGGGTTAAAAGCGGAATAAGAACGc > 2:1354383/1‑140 (MQ=255) gATTAAACGCCTGTATAGACGGTTACAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGc < 1:471440/140‑1 (MQ=255) aTTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCt > 1:1737832/1‑140 (MQ=255) aTTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCt > 1:203195/1‑140 (MQ=255) aTTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCt > 1:862771/1‑140 (MQ=255) aaaCGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGtt < 1:668910/140‑1 (MQ=255) aCGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGtttt > 1:1610635/1‑140 (MQ=255) aCGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGtttt > 2:363825/1‑140 (MQ=255) aCGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCAGAATAAGTACGCTGtttt > 1:1080897/1‑140 (MQ=255) ccTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCt < 2:1737832/140‑1 (MQ=255) tGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTcc > 2:715532/1‑140 (MQ=255) tataGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAg > 2:1236021/1‑140 (MQ=255) ataGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAgg < 1:1118039/140‑1 (MQ=255) aGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGa < 1:715532/140‑1 (MQ=255) aCGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGAcc > 2:981156/1‑140 (MQ=255) aCGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGAcc > 1:136121/1‑140 (MQ=255) aCGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGAcc < 1:1682822/140‑1 (MQ=255) cGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACTATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACct < 1:1208754/140‑1 (MQ=255) ggTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACctc > 1:1690922/1‑140 (MQ=255) ttGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTg > 2:1518928/1‑140 (MQ=255) tGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAggg < 1:723550/132‑1 (MQ=255) tGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAggg > 2:723550/1‑132 (MQ=255) aaaaGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGcc < 2:2153287/140‑1 (MQ=255) aaaaGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGcc < 1:363825/140‑1 (MQ=255) aaaaGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGcc < 2:1700260/140‑1 (MQ=255) aaaGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCa > 1:2017358/1‑140 (MQ=255) aGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGc < 1:704876/140‑1 (MQ=255) aGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGc < 1:1212064/140‑1 (MQ=255) aGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTCGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGc < 2:1284142/140‑1 (MQ=255) ccATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCat < 2:459502/140‑1 (MQ=255) ccATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCat < 1:1419127/140‑1 (MQ=255) ccATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCat < 2:1124802/140‑1 (MQ=255) ccATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCat < 2:203195/140‑1 (MQ=255) aTCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCatat < 2:1618141/140‑1 (MQ=255) tCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATg < 1:1797770/140‑1 (MQ=255) cGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGaacaa > 2:856064/1‑140 (MQ=255) gCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGaacaac < 1:1893698/140‑1 (MQ=255) cTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAacaaca > 1:994012/1‑140 (MQ=255) cTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAacaaca > 1:767431/1‑140 (MQ=255) aCCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGt > 2:1245007/1‑140 (MQ=255) ttttCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGtt < 1:51459/135‑1 (MQ=255) cAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTcc < 1:1245007/140‑1 (MQ=255) aaGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCaga < 2:2017358/140‑1 (MQ=255) aTTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCt < 2:1006248/140‑1 (MQ=255) tttGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTg < 2:604162/140‑1 (MQ=255) tttGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTg < 2:2088284/140‑1 (MQ=255) tttGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTg < 1:2003140/140‑1 (MQ=255) ttGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGc > 1:1055126/1‑140 (MQ=255) gCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTc > 2:1544996/1‑140 (MQ=255) aGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGc < 2:424961/140‑1 (MQ=255) gTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGca < 1:2084730/140‑1 (MQ=255) tGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTg > 2:1664361/1‑126 (MQ=255) tGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTg < 1:1664361/126‑1 (MQ=255) tGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGcac > 1:886105/1‑140 (MQ=255) tGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGcac > 1:1746036/1‑140 (MQ=255) ggCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGcacc > 1:1829189/1‑140 (MQ=255) ggCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGca > 1:1654442/1‑138 (MQ=255) cATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGcaccac < 1:1518928/140‑1 (MQ=255) atCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTa > 1:280985/1‑140 (MQ=255) cGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTaaa < 1:481816/140‑1 (MQ=255) ggAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAAt < 1:2245658/140‑1 (MQ=255) gagaAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAAtt > 2:1952293/1‑140 (MQ=255) gagaAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAAtt > 2:359879/1‑140 (MQ=255) gagaAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAAtt > 2:509903/1‑140 (MQ=255) gaAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAAtttt > 1:372849/1‑140 (MQ=255) aaCCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGaa > 1:591979/1‑140 (MQ=255) aCCATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAg > 1:311702/1‑140 (MQ=255) ccATTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGAGATCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCTCCGCCTAAATTTTCCTGAAGt < 2:1327327/140‑1 (MQ=255) aTTACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTg < 1:660551/140‑1 (MQ=255) ttACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGa > 1:1897811/1‑140 (MQ=255) ttACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGa > 1:262152/1‑140 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 1:509903/140‑1 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 1:431040/140‑1 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 2:591979/140‑1 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 1:335930/140‑1 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 2:456261/140‑1 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg > 2:944750/1‑140 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 2:1676759/140‑1 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAg > 1:1940955/1‑140 (MQ=255) tACCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCCCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTTGAGGCACCACCTAAATTTTCCTGAAGTTGAg < 2:2125981/140‑1 (MQ=255) aCCATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGc < 2:1055126/140‑1 (MQ=255) cATATCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGa < 2:1620292/140‑1 (MQ=255) atCCGCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGt < 2:83549/140‑1 (MQ=255) gCAGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAAt < 2:1897811/140‑1 (MQ=255) aGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGt > 1:1596707/1‑140 (MQ=255) aGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGt > 1:588720/1‑140 (MQ=255) aGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGt > 1:773423/1‑140 (MQ=255) aGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGt > 1:2252417/1‑140 (MQ=255) aGGGTTAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGt > 2:1884347/1‑140 (MQ=255) ttAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGc > 2:426004/1‑140 (MQ=255) tAAAAGCGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCa < 2:773423/140‑1 (MQ=255) tAAAAGAGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCa < 1:1531805/140‑1 (MQ=255) cGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCATAACGa < 2:767431/140‑1 (MQ=255) cGGAATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTCGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCATAACGa < 2:1531663/140‑1 (MQ=255) gCATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCATAACGATa > 1:133072/1‑140 (MQ=255) | TATTGATTAAACGCCTGTATAGACGGTTGCAAAAAGCCATCTTTCGCTTTAACCGCTTTTTCAAAAGCATTTGCCATAGAAAGTGGCATATCGGAGAAATTAACCATTACCATATCCGCAGGGTTAAAAGCGGCATAAGTACGCTGTTTTGCTCCAGGGACCTCTGTTGCCAGCATATGAACAACATGGGTTGCAATTTCCAGAGCCTGCTCCCTGGAGGCACCACCTAAATTTTCCTGAAGTTGAGCGAGGTTAATGTTGGCATAACGATA > NC_000913/2881199‑2881470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |