| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 486,332 | C→A | A191D (GCC→GAC) | acrR → | DNA‑binding transcriptional repressor AcrR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 486,332 | 0 | C | A | 98.3% | 396.2 / ‑6.5 | 119 | A191D (GCC→GAC) | acrR | DNA‑binding transcriptional repressor AcrR |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base A (60/57); total (60/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 125 total aligned reads displayed.
AAAACATTGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGCCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGCTATTCTGGTTCA > NC_000913/486195‑486466 | aaCATTGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACcgc < 1:1668815/140‑1 (MQ=255) tGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTa < 1:1359685/140‑1 (MQ=255) tGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTa > 2:1571537/1‑140 (MQ=255) tGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTa > 2:1144978/1‑140 (MQ=255) tATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACg > 1:1500208/1‑140 (MQ=255) tATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACg > 2:1166269/1‑140 (MQ=255) aaGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGcc > 1:1897333/1‑140 (MQ=255) aaGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGcc > 1:1631741/1‑140 (MQ=255) aaGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGcc > 2:1211320/1‑140 (MQ=255) cGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATc > 2:1449197/1‑140 (MQ=255) cGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATc > 1:118353/1‑140 (MQ=255) aaaaTGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCtt > 1:129660/1‑140 (MQ=255) aaaaTGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCtt > 2:1272785/1‑140 (MQ=255) aaaaTGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCtt > 2:1996555/1‑140 (MQ=255) aaaTGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTa < 1:551932/140‑1 (MQ=255) aaaTGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTa < 2:212459/140‑1 (MQ=255) aaaTGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTa < 2:1999996/140‑1 (MQ=255) tGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTg < 1:16839/140‑1 (MQ=255) tGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTg < 1:1571537/140‑1 (MQ=255) tGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTg < 1:1168733/140‑1 (MQ=255) gTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTgg < 1:1272785/140‑1 (MQ=255) gTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTgg < 1:2255934/140‑1 (MQ=255) gTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTgg < 1:456386/140‑1 (MQ=255) ttGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGga < 2:1970769/140‑1 (MQ=255) ttGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGga < 2:167780/140‑1 (MQ=255) ttGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGga < 1:2068612/140‑1 (MQ=255) ttGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGga < 1:1144978/140‑1 (MQ=255) gCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGgaga > 1:835549/1‑140 (MQ=255) tGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGt > 1:2124523/1‑140 (MQ=255) cGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTAt < 2:1462478/140‑1 (MQ=255) ggATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTAtc > 2:1317895/1‑140 (MQ=255) tAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCtg > 2:1048071/1‑140 (MQ=255) aaTGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTACCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTAtctc > 1:841943/1‑136 (MQ=255) gACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGcc < 2:172911/140‑1 (MQ=255) aCGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGccc < 2:2124523/140‑1 (MQ=255) aCGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGccc < 2:133562/140‑1 (MQ=255) aCGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCACAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGccc < 2:2116278/140‑1 (MQ=255) cgTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCAc < 2:512527/140‑1 (MQ=255) gTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACg < 1:1317895/140‑1 (MQ=255) gTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACg < 1:1763321/140‑1 (MQ=255) gTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACg < 1:1389843/140‑1 (MQ=255) cgcgCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCt < 1:1283283/140‑1 (MQ=255) gcagcaATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCg < 2:587064/140‑1 (MQ=255) cagcaATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGt > 1:1130808/1‑140 (MQ=255) cagcaATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGt < 2:1536070/140‑1 (MQ=255) cagcaATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGt > 1:70278/1‑140 (MQ=255) ttattaTGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCt > 2:133266/1‑140 (MQ=255) ttGCGCGGTTTTATTTCCGGCCTGATGGAAAACTGCCTCTTTGCCCCGCATTCTTTTGATCTTAAAAAAGAAGACCGCGTTTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCAc < 2:568346/139‑1 (MQ=255) atGCGCGGCTATATTTCCGGCCTGATGG‑AAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACt > 1:209065/1‑140 (MQ=255) gcgcGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTa > 1:2145670/1‑140 (MQ=255) gcgcGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTa > 2:1247567/1‑140 (MQ=255) gcgcGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTa < 2:425585/140‑1 (MQ=255) gcgcGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTa > 2:1989771/1‑140 (MQ=255) gcgGCTATATTTCCGCCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAATAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAAc > 2:1665135/1‑140 (MQ=255) cgGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCa < 2:1585217/134‑1 (MQ=255) cgGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACg > 2:1570496/1‑140 (MQ=255) cgGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACg > 2:1414124/1‑140 (MQ=255) ggCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGa > 1:1392565/1‑140 (MQ=255) cTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAAt < 2:1897333/140‑1 (MQ=255) tatTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAAc > 1:239831/1‑140 (MQ=255) atTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAAcc < 1:1570496/140‑1 (MQ=255) atTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAAcc < 1:425323/140‑1 (MQ=255) ggCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAAt > 1:1304226/1‑140 (MQ=255) ggCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAAt > 2:1779290/1‑140 (MQ=255) ggCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCATGAAt > 1:574861/1‑140 (MQ=255) ccTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTACCACTAACGAATAACCCTGAATCt < 2:900696/140‑1 (MQ=255) tGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTc < 1:404732/140‑1 (MQ=255) ggAAAACTGGCTTTTTGCCCCGCAATTTTTTGATCTTAAAAAAGAAGCCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTcc < 2:110169/140‑1 (MQ=255) cTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGAtt > 1:377797/1‑140 (MQ=255) ggCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGAtttt > 1:811408/1‑140 (MQ=255) ggCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGAtttt > 1:566550/1‑140 (MQ=255) ggCTCTTTGCCCCGCAAACTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGa > 2:1572272/1‑128 (MQ=255) ggCTCTTTGCCCCGCAAACTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGa < 1:1572272/128‑1 (MQ=255) gCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGAttttt > 2:700556/1‑140 (MQ=255) gCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGAttttt > 2:1049706/1‑140 (MQ=255) ctTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCt < 2:73484/140‑1 (MQ=255) ttGCCCCGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTgg > 2:1054783/1‑140 (MQ=255) ccccGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACa > 2:1261154/1‑140 (MQ=255) ccccGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACa > 2:844869/1‑140 (MQ=255) cccagCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACa > 1:28098/5‑140 (MQ=255) ccGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACAtt > 1:168364/1‑140 (MQ=255) cGCAATCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGAATTTTCCTGGACAttt > 1:32621/1‑140 (MQ=255) aTCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt < 1:1261154/140‑1 (MQ=255) aTCTTTTGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt < 1:844869/140‑1 (MQ=255) aTCTTTGGATTTTAAAAAAGAAGACCGCAATTACATTGCCATCTTATTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt < 2:861718/140‑1 (MQ=255) aTCTTTGCATCTTAAACAAGAGGACCGCGATTACTTTGCATTTTTAGTGAAGATGTCTGTCCGCTGCCCCACCATTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt < 2:887597/140‑1 (MQ=255) aTCTTTCGATCTTAAAAAAGAAGACCGCGATTATGTTGCATTCTTACTGGAGATATATCCCCTGTGCCTCATGTTTCGTATTCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt < 2:566550/140‑1 (MQ=255) ttttGATCTTAAAAGAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTcgtcgt > 2:1341942/1‑140 (MQ=255) tttGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGtt < 2:1657037/140‑1 (MQ=255) ttGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTg < 1:133266/140‑1 (MQ=255) tGATCTTAAAAAAGAAGGCCGCGATTGCGTTGCCTTCTTACTGGAGATGTATCTCCTGTGCCCCCCGCTTCGTACTCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGc < 2:633999/140‑1 (MQ=255) tGATCTTAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCTTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGc < 2:118353/140‑1 (MQ=255) aTCTTAAAAGAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGCTa > 1:1575268/1‑140 (MQ=255) ttAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgtc < 1:1815525/130‑1 (MQ=255) ttAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgtc > 2:1815525/1‑130 (MQ=255) ttAAAAAAGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGCTATTc > 2:1062376/1‑140 (MQ=255) aaaaaaGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt < 1:178784/127‑1 (MQ=255) aaaaaaGAAGACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTtcgt > 2:178784/1‑127 (MQ=255) aagaagACCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCCCGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGCTATTCTGGTTc < 2:168364/140‑1 (MQ=255) agaagaCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGCTATTCTGGTTCa < 1:1449197/140‑1 (MQ=255) | AAAACATTGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGCCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAACCCTGAATCTGACTCCAGGATTTTTCCTGGACATTTTCGTCGTTGCTATTCTGGTTCA > NC_000913/486195‑486466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |