BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,253,014	(A)_7→6	intergenic (+11/‑2)	ubiC → / → ubiA	chorismate lyase/4‑hydroxybenzoate octaprenyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,253,008	0	A	.	100.0%	523.5 / NA	125	intergenic (+5/‑8)	ubiC/ubiA	chorismate lyase/4‑hydroxybenzoate octaprenyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (62/63); total (62/63)

Only 100 of 139 total aligned reads displayed.

TCATCGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGT  >  NC_000913/4252869‑4253143

tcatcGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGa                                                                                                                                         >  1:1932020/1‑140 (MQ=255)

  atcGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaa                                                                                                                                       >  2:2468807/1‑140 (MQ=255)

    cGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaaaa                                                                                                                                     >  1:2256222/1‑140 (MQ=255)

    cGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaaaa                                                                                                                                     >  2:807632/1‑140 (MQ=255)

    cGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaaaa                                                                                                                                     >  1:1978719/1‑140 (MQ=255)

    cGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaa                                                                                                                                       <  2:2020386/138‑1 (MQ=255)

    cGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaa                                                                                                                                       >  1:2020386/1‑138 (MQ=255)

              ccGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTTCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATAtggagtg                                                                                                                          <  1:1339977/140‑1 (MQ=255)

                 ggACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATAtggagtggag                                                                                                                       >  2:2072516/1‑140 (MQ=255)

                 ggACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATAtggagtggag                                                                                                                       >  1:1973628/1‑140 (MQ=255)

                 ggACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATAtggagtggag                                                                                                                       >  2:2166973/1‑140 (MQ=255)

                      ttATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑‑AAAAATATGGAGTGGAGTCTGAc                                                                                                                 >  2:1135042/1‑140 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 >  2:2633018/1‑140 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 <  1:2518584/140‑1 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 <  1:469321/140‑1 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 <  2:497395/140‑1 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 <  1:1247342/140‑1 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCACTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaaaaat                                                                                                                                   >  2:2104177/1‑122 (MQ=255)

                       tATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCACTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGaaaaaat                                                                                                                                   <  1:2104177/123‑2 (MQ=255)

                        aTTGAGATAGGCGGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACg                                                                                                                <  2:1450699/140‑1 (MQ=255)

                        aTTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACg                                                                                                                >  1:2212392/1‑140 (MQ=255)

                         ttGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGc                                                                                                               <  1:2178389/140‑1 (MQ=255)

                            agaTAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTc                                                                                                                     >  2:479942/1‑131 (MQ=255)

                            agaTAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGa                                                                                                            >  1:2426189/1‑140 (MQ=255)

                               tAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATa                                                                                                         >  1:159509/1‑140 (MQ=255)

                                 ggCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAg                                                                                                       >  1:449663/1‑140 (MQ=255)

                                 ggCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAg                                                                                                       <  1:1315506/140‑1 (MQ=255)

                                   ccGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAgct                                                                                                     >  1:1656249/1‑140 (MQ=255)

                                      tGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAgctgct                                                                                                  >  1:1754655/1‑140 (MQ=255)

                                      tGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAgctgct                                                                                                  >  2:2292655/1‑140 (MQ=255)

                                      tGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAg                                                                                                       <  1:2633722/135‑1 (MQ=255)

                                      tGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAg                                                                                                       >  2:2633722/1‑135 (MQ=255)

                                       gATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGctgctg                                                                                                 <  1:2196219/140‑1 (MQ=255)

                                        aTGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 <  1:896071/123‑1 (MQ=255)

                                        aTGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGAc                                                                                                                 >  2:896071/1‑123 (MQ=255)

                                          gCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCg                                                                                              <  1:2072516/140‑1 (MQ=255)

                                           ccGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGt                                                                                             >  2:2205139/1‑140 (MQ=255)

                                            cGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCTGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAAG‑AAAAACTATGGCGCGCAATCTGACGGAGAATAAGCTGCTATCGtt                                                                                            >  2:2534280/1‑140 (MQ=255)

                                              ggCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCg                                                                                              >  1:1794989/1‑136 (MQ=255)

                                              ggCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCg                                                                                              <  2:1794989/136‑1 (MQ=255)

                                              ggCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTc                                                                                          <  1:551141/140‑1 (MQ=255)

                                               gCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCa                                                                                         <  1:1779519/140‑1 (MQ=255)

                                               gCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCa                                                                                         <  1:989538/140‑1 (MQ=255)

                                                cTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCAt                                                                                        <  2:1758081/140‑1 (MQ=255)

                                                   tgGGGGCGACGTTCCTGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     >  1:1520093/1‑140 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGc                                                                                               <  1:540262/130‑1 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     >  1:2011709/1‑140 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     <  2:1920290/140‑1 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     >  1:1755675/1‑140 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     >  1:2640410/1‑140 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     >  1:2425661/1‑140 (MQ=255)

                                                   tgGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGc                                                                                     >  1:883852/1‑140 (MQ=255)

                                                      gggCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTa                                                                                  <  2:2426189/140‑1 (MQ=255)

                                                       ggCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTaa                                                                                 <  2:2011709/140‑1 (MQ=255)

                                                       ggCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTaa                                                                                 <  2:1978719/140‑1 (MQ=255)

                                                        gCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAAt                                                                                <  1:1801014/140‑1 (MQ=255)

                                                        gCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAAt                                                                                <  2:86799/140‑1 (MQ=255)

                                                        gCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAAt                                                                                <  2:2640410/140‑1 (MQ=255)

                                                         cGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTaa                                                                                 <  2:612316/138‑1 (MQ=255)

                                                         cGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTaa                                                                                 >  1:612316/1‑138 (MQ=255)

                                                           ccGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCg                                                                             <  1:74079/139‑1 (MQ=255)

                                                            cGTTCCTGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGt                                                                            <  2:1520093/140‑1 (MQ=255)

                                                                cccGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACgg                                                                        <  2:2094853/140‑1 (MQ=255)

                                                                cccGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACgg                                                                        <  1:2166973/140‑1 (MQ=255)

                                                                 ccGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGa                                                                       <  2:2425661/140‑1 (MQ=255)

                                                                  cGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGAt                                                                      <  2:1755675/140‑1 (MQ=255)

                                                                      tGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGc                                                                  >  1:1210339/1‑140 (MQ=255)

                                                                        cGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCa                                                                >  2:137220/1‑140 (MQ=255)

                                                                            tAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑‑AAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTgg                                                           <  1:1135042/140‑1 (MQ=255)

                                                                             aaGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTgg                                                           <  1:1393675/140‑1 (MQ=255)

                                                                             aaGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTgg                                                           <  1:646799/140‑1 (MQ=255)

                                                                                  gTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGt                                                      <  2:1621191/140‑1 (MQ=255)

                                                                                  gTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGt                                                      <  2:2212392/140‑1 (MQ=255)

                                                                                    aaaCCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTa                                                    >  2:57608/1‑140 (MQ=255)

                                                                                     aaCCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAc                                                   >  2:1402360/1‑140 (MQ=255)

                                                                                       ccGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTActg                                                 <  2:951751/140‑1 (MQ=255)

                                                                                       ccGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTActg                                                 <  1:2633018/140‑1 (MQ=255)

                                                                                          cTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTActgctg                                              >  2:1830100/1‑140 (MQ=255)

                                                                                            gTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTgctgct                                            <  2:2117353/140‑1 (MQ=255)

                                                                                            gTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTgctgct                                            <  1:1916164/140‑1 (MQ=255)

                                                                                             ttGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGctc                                           <  1:2504378/140‑1 (MQ=255)

                                                                                               gCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTg                                         >  1:2110868/1‑140 (MQ=255)

                                                                                                 tAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGc                                       <  2:1656249/140‑1 (MQ=255)

                                                                                                  aaCAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGcc                                      <  2:735915/140‑1 (MQ=255)

                                                                                                  aaCAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGcc                                      <  2:449663/140‑1 (MQ=255)

                                                                                                       aaCTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTgg                                        >  2:1272503/1‑133 (MQ=255)

                                                                                                       aaCTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTgg                                        <  1:1272503/133‑1 (MQ=255)

                                                                                                       aaCTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTgg                                        <  1:2743759/133‑1 (MQ=255)

                                                                                                       aaCTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTgg                                        >  2:2743759/1‑133 (MQ=255)

                                                                                                       aaCTGTTTTTACCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACAt                                 >  2:251145/1‑140 (MQ=255)

                                                                                                       aaCTGTTTTTACCGGAGTCACCGTTGTACTAAGAGG‑AAACAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACAt                                 >  2:2357273/1‑140 (MQ=255)

                                                                                                                 aCCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTAt                              >  1:1550629/1‑133 (MQ=255)

                                                                                                                 aCCGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGtt                       >  1:585829/1‑140 (MQ=255)

                                                                                                                  ccGGCGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTtg                      <  2:2727848/140‑1 (MQ=255)

                                                                                                                      cGTCACCGTTGTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTgtggg                  >  2:21746/1‑140 (MQ=255)

                                                                                                                                gTACTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACAcc        >  2:2290561/1‑140 (MQ=255)

                                                                                                                                   ctcagagG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGCGGCGACACCggg     >  2:1813554/4‑140 (MQ=255)

                                                                                                                                   cTAAGAGG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCggg     <  1:2357273/140‑1 (MQ=255)

                                                                                                                                      agagG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGt  >  1:1871603/1‑140 (MQ=255)

                                                                                                                                      agagG‑AAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGt  >  2:1888370/1‑140 (MQ=255)

TCATCGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGT  >  NC_000913/4252869‑4253143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`