Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,926,3660AC27.7% 289.4 / 27.2 130G30G (GGT→GGG) mioCflavoprotein MioC
Reads supporting (aligned to +/- strand):  ref base A (71/23);  new base C (0/36);  total (71/59)
Fisher's exact test for biased strand distribution p-value = 9.02e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 144 total aligned reads displayed.

TCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGT  >  NC_000913/3926227‑3926503
                                                                                                                                           |                                                                                                                                           
tCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTaaaa                                                                                                                                             >  2:420541/1‑140 (MQ=255)
tCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGCTGGTaaaa                                                                                                                                             >  1:1589842/1‑140 (MQ=255)
       cTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑Cct                                                                                                                                    >  1:424930/1‑140 (MQ=255)
       cTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑Cct                                                                                                                                    >  1:2759386/1‑140 (MQ=255)
       cTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑Cct                                                                                                                                    >  1:2279444/1‑140 (MQ=255)
            aTGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTcc                                                                                                                               >  1:1513344/1‑140 (MQ=255)
              gCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAg                                                                                                                             >  2:2309475/1‑140 (MQ=255)
              gCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAg                                                                                                                             >  2:1033917/1‑140 (MQ=255)
                 tCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCtt                                                                                                                          >  2:534268/1‑140 (MQ=255)
                 tCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCtt                                                                                                                          >  1:1570064/1‑140 (MQ=255)
                   aTAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCtttt                                                                                                                        <  1:1013979/140‑1 (MQ=255)
                    tAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTc                                                                                                                       >  2:1684896/1‑140 (MQ=255)
                         aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCa                                                                                                                  >  2:860602/1‑140 (MQ=255)
                          ggggaaaggTTTTTTGGAATTTCTCGGGCTCTGTGGGTGGAGGGGATAACCAGCCACATCCGTGGGGGAGGAAATTCTTCTAACGGGGGACGGTGGAGTTTTGCGGTGATAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAg                                                                                                                 <  2:1378066/137‑1 (MQ=255)
                          ggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAg                                                                                                                 <  2:2404090/140‑1 (MQ=255)
                            agaagggTTTTCGGGAATATCTCGGGCACGATGGGGGAAGCTGAGACCCAGCTGTATCCCGGAGGCGGGCAAATCTTCTACCGGGGAACCGGCCAGCGTTTGGGGGGAAACA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               <  2:828039/140‑1 (MQ=255)
                            agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               <  1:486990/140‑1 (MQ=255)
                            agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               >  1:1725014/1‑140 (MQ=255)
                             gaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgtg                                                                                                              <  2:465248/140‑1 (MQ=255)
                             aaaaggTTGTCCGGAATATCTCCGGCCCCGTGGGTGGGGCTGATAACCAGCAAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTCCAGCGTTTCGGTGATAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgtg                                                                                                              <  2:179501/139‑1 (MQ=255)
                              aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             >  2:2764230/1‑140 (MQ=255)
                              aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             >  1:1510295/1‑140 (MQ=255)
                               agggTTGTCCGGAATCTCTCCGCCACCGTGGGGGGGGCTGAAAACCAGCCAGATCCCTGAGGCAGGAAAATCTTCTAACAGCGGACCGTGCAGCGTTCCGGTGGAAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  2:1413468/138‑1 (MQ=255)
                               aaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  1:1909500/140‑1 (MQ=255)
                                 ggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCt                                                                                                          >  1:577256/1‑140 (MQ=255)
                                     gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            >  1:1875385/1‑134 (MQ=255)
                                     gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  2:1875385/134‑1 (MQ=255)
                                     gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  2:222639/1‑140 (MQ=255)
                                      tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                     <  1:2434083/140‑1 (MQ=255)
                                      tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                     >  2:181634/1‑140 (MQ=255)
                                        cGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACat                                                                                                   >  1:2116780/1‑140 (MQ=255)
                                                ctcCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                           >  1:1180415/1‑140 (MQ=255)
                                                ctcCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                           >  1:2117194/1‑140 (MQ=255)
                                                ctcCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                           >  1:1098248/1‑140 (MQ=255)
                                                         cGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGGAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgg                                                                                  >  2:619943/1‑140 (MQ=255)
                                                           tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgggg                                                                                >  2:2645943/1‑139 (MQ=255)
                                                           tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  1:2352471/1‑140 (MQ=255)
                                                           tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  2:2517586/1‑140 (MQ=255)
                                                                 gAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGcc                                                                          >  1:434199/1‑140 (MQ=255)
                                                                 gAGCTAAAACCCAGCCAGACCCCTGAGGCGGGTAAATTTTCAAACGGCGGCCGGGGCGGCTTTTCGGGGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGcc                                                                          <  2:2677227/140‑1 (MQ=255)
                                                                  aGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCg                                                                         >  1:2538230/1‑140 (MQ=255)
                                                                  aGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCg                                                                         >  1:2092839/1‑140 (MQ=255)
                                                                    cTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCt                                                                       >  1:1815558/1‑140 (MQ=255)
                                                                    cTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCt                                                                       >  1:2560168/1‑140 (MQ=255)
                                                                    cTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCt                                                                       >  1:2200692/1‑140 (MQ=255)
                                                                       aaacccagccagATCCCGGGGGCAGGAAATTCTTCTAACAGCGGCCGGTGCAGCTTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:2116780/136‑1 (MQ=255)
                                                                       aTACCCAGCCAGATCCTGGAGGCAGGAAAATCTTCTAACAGCGGCCCGTGCAGCGTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:1544762/140‑1 (MQ=255)
                                                                       aTAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    >  2:56878/1‑140 (MQ=255)
                                                                           ccagccagATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAaga                                                                >  2:2332060/1‑140 (MQ=255)
                                                                              gccagATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                             >  1:7096/1‑140 (MQ=255)
                                                                              gccagATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                             >  1:328088/1‑140 (MQ=255)
                                                                                 agATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGata                                                          >  1:1394758/1‑140 (MQ=255)
                                                                                  gaccccTGAGGCAGGAAATTCTTCAAACAGCGGACGGGGCAGC‑TTTCCGGGGTAAAACCCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGatat                                                         <  1:2764230/137‑1 (MQ=255)
                                                                                  gATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGatat                                                         <  1:2109683/140‑1 (MQ=255)
                                                                                   aTCCGTGAGGCGGGTAAATCTCCTAACAGCGGCCCGTGCGGCGTTCCGGTGGTAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATc                                                        <  1:1394561/140‑1 (MQ=255)
                                                                                   aTCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑ACCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGGGCTGCCGCTGATAAGAATGATATc                                                        >  1:498014/1‑140 (MQ=255)
                                                                                       cTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGcc                                                    >  1:1802487/1‑140 (MQ=255)
                                                                                         gAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCAt                                                  >  1:2191772/1‑140 (MQ=255)
                                                                                          gggCAGGTAATTTTTCTACCGGCGGCCCGTGCAGCTTTTGGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATa                                                 <  1:343240/139‑1 (MQ=255)
                                                                                          aGGCAGGAAAATCTTCAAACAGCGGCCCGTGCAGCGTTTCGGGGGAAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATa                                                 <  1:829343/140‑1 (MQ=255)
                                                                                             cAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAAc                                              >  2:1144547/1‑140 (MQ=255)
                                                                                               ggTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGatat                                                         <  1:2311900/127‑1 (MQ=255)
                                                                                               ggTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            >  2:1570446/1‑140 (MQ=255)
                                                                                                taaattcttctAACGGCGGCCGGTGCGGCTTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:2538230/135‑1 (MQ=255)
                                                                                                gaaaaTTTTCTAACGGGGGACGGGGCGGCTTTTGGGGGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:2092839/138‑1 (MQ=255)
                                                                                                gTAAATCTTCTAACAGCGGCCCGTGCAGCGTTTGGGGGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCACCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  1:860602/140‑1 (MQ=255)
                                                                                                gTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  1:1460859/140‑1 (MQ=255)
                                                                                                atAAATCTTCAAACGGGGGACGGTGCGGCGTTTGGGTGGTAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:1802487/139‑1 (MQ=255)
                                                                                                accagtcttatAACGGGGGCCGGTGCGGGGTTGGGGGGGAAAAA‑CCCG‑CCCCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCCCCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:111143/135‑1 (MQ=255)
                                                                                                  aattcttctAACGGGGGCCGGGGCAGCTTTTGGGTGAAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCa                                         <  2:328088/137‑1 (MQ=255)
                                                                                                  aaaTCTTCTAACAGCGGCCCGTGCAGCTTTTGGGTGGTAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCa                                         <  1:420541/140‑1 (MQ=255)
                                                                                                  aaaTCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCa                                         <  1:1144547/140‑1 (MQ=255)
                                                                                                    attttctAACGGCGGCCGGTGCGGCGTTTGGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCAcc                                       <  1:181634/137‑1 (MQ=255)
                                                                                                    aTCTTCTAACGGCGGCCGGTGCGGGTTTGGGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCAcc                                       <  2:1772066/140‑1 (MQ=255)
                                                                                                    aTCTTCTAACAGCGGACCGTGCAGCTTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCAcc                                       <  1:1684896/140‑1 (MQ=255)
                                                                                                     tcttctACCAGCGGCCGGTGCGGTTTTTGGGTGAAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCt                                      <  2:2560168/140‑1 (MQ=255)
                                                                                                        tctAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTtta                                   >  1:1453548/1‑140 (MQ=255)
                                                                                                          tAACGGCGGCCCGTGCGGCTTTTGGGTGAAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                                 <  2:1663505/140‑1 (MQ=255)
                                                                                                          tAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCTATAAACCGCCACCTttatt                                 >  2:1707620/1‑140 (MQ=255)
                                                                                                          tAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                                 >  2:2006476/1‑140 (MQ=255)
                                                                                                              aGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAaga                             >  1:845659/1‑140 (MQ=255)
                                                                                                                cGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                           >  1:378344/1‑140 (MQ=255)
                                                                                                                cGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                           >  1:1440448/1‑140 (MQ=255)
                                                                                                                 ggccggggCAGCGTTTCGGTGGTAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                          <  2:1066394/133‑1 (MQ=255)
                                                                                                                 ggACCGTGC‑GGTTTTTGGGGGTAAAACCCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATCCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                          <  2:196985/140‑1 (MQ=255)
                                                                                                                   ccggTGCGGCGTTCGGGTGGAAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  1:2076799/137‑1 (MQ=255)
                                                                                                                   cccGTGCCGGTTTTGGTTGGAAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  2:7096/139‑1 (MQ=255)
                                                                                                                   cccGTGCAGCGTTTCGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  1:1033917/139‑1 (MQ=255)
                                                                                                                   aCCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        >  1:2291303/1‑140 (MQ=255)
                                                                                                                   aCCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        >  1:196985/1‑140 (MQ=255)
                                                                                                                      gTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTa                     >  2:1594634/1‑140 (MQ=255)
                                                                                                                      gTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTa                     >  2:1478646/1‑140 (MQ=255)
                                                                                                                      gTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTa                     >  1:377213/1‑140 (MQ=255)
                                                                                                                        gCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAtt                   >  2:1406825/1‑140 (MQ=255)
                                                                                                                           ggttttGGGTGGAAAAC‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTa                <  2:2291303/137‑1 (MQ=255)
                                                                                                                             ttttCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACg              <  1:1940803/139‑1 (MQ=255)
                                                                                                                                     gaaaaac‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAAc      <  2:1453548/137‑1 (MQ=255)
                                                                                                                                      gcaaaa‑CCCGTCCTTTTCCCGGTTTTAACCCTGGTTTTCTGCTACATATTCGGAGCCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAAc      <  2:2764514/138‑1 (MQ=255)
                                                                                                                                        aaac‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAAcgcg   <  2:924564/140‑1 (MQ=255)
                                                                                                                                         aaa‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGt  >  2:950005/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCG‑CCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGT  >  NC_000913/3926227‑3926503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑