BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,699,247	C→A	intergenic (‑67/‑108)	malI ← / → malX	DNA‑binding transcriptional repressor MalI/PTS enzyme IIBC component MalX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,699,247	0	C	A	100.0%	381.2 / NA	108	intergenic (‑67/‑108)	malI/malX	DNA‑binding transcriptional repressor MalI/PTS enzyme IIBC component MalX
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (63/45); total (63/45)

Only 100 of 110 total aligned reads displayed.

AAACGGTACTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGCTATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCAC  >  NC_000913/1699111‑1699383

aaaCGGTACTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGatat                                                                                                                                       <  1:2768494/140‑1 (MQ=255)

aaaCGGTACTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGatat                                                                                                                                       <  1:882017/140‑1 (MQ=255)

    ggTACTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATc                                                                                                                                   <  1:2742439/140‑1 (MQ=255)

     gTACTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCg                                                                                                                                  <  2:2714875/140‑1 (MQ=255)

       aCTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGtt                                                                                                                                <  1:1054761/140‑1 (MQ=255)

       aCTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGtt                                                                                                                                <  1:1624538/140‑1 (MQ=255)

          tACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCg                                                                                                                             <  1:213671/140‑1 (MQ=255)

          tACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCg                                                                                                                             <  1:1524440/140‑1 (MQ=255)

           aCCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGt                                                                                                                            >  1:1803906/1‑140 (MQ=255)

              gACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAAt                                                                                                                         <  1:2146750/140‑1 (MQ=255)

               acacGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAAtg                                                                                                                        <  2:761639/140‑1 (MQ=255)

                cacGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTa                                                                                                                           <  1:643517/136‑1 (MQ=255)

                cacGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTa                                                                                                                           >  2:643517/1‑136 (MQ=255)

                  cGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGa                                                                                                                     >  1:1310103/1‑140 (MQ=255)

                   gCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGAt                                                                                                                    >  2:791410/1‑140 (MQ=255)

                    cccGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGAtt                                                                                                                   >  2:2446000/1‑140 (MQ=255)

                     ccGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGAttt                                                                                                                  >  2:513981/1‑140 (MQ=255)

                        cagccagcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTa                                                                                                                           >  2:301432/1‑128 (MQ=255)

                        cagccagcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTa                                                                                                                           <  1:301432/128‑1 (MQ=255)

                         agccagcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGc                                                                                                              <  1:1016595/140‑1 (MQ=255)

                         agccagcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTACCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGc                                                                                                              <  2:1310103/140‑1 (MQ=255)

                             agcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCa                                                                                                          >  1:808366/1‑140 (MQ=255)

                             agcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCa                                                                                                          >  1:2228962/1‑140 (MQ=255)

                             agcGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCa                                                                                                          >  1:1680035/1‑140 (MQ=255)

                             agcGCAACATCATGAATGGTTATTTTTTTGGCGGAAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCa                                                                                                          >  1:1195268/1‑140 (MQ=255)

                                gcAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTa                                                                                                       <  1:2707163/140‑1 (MQ=255)

                                       catGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTg                                                                                                >  2:2370456/1‑140 (MQ=255)

                                           aaTGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            <  1:1398135/140‑1 (MQ=255)

                                           aaTGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            <  1:1683607/140‑1 (MQ=255)

                                           aaTGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            <  1:2354104/140‑1 (MQ=255)

                                           aaTGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            <  1:2446000/140‑1 (MQ=255)

                                           aaTGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            <  2:1680035/140‑1 (MQ=255)

                                             tGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaaaa                                                                                          <  1:732842/140‑1 (MQ=255)

                                              ggTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAAc                                                                                         >  1:2434692/1‑140 (MQ=255)

                                               gTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAAt                                                                                                   <  2:2188730/129‑1 (MQ=255)

                                               gTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAAt                                                                                                   >  1:2188730/1‑129 (MQ=255)

                                                ttATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            >  2:1828734/1‑135 (MQ=255)

                                                ttATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATaa                                                                                            <  1:1828734/135‑1 (MQ=255)

                                                 tATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGtt                                                                                      >  1:1312469/1‑140 (MQ=255)

                                                       tttGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTAtct                                                                                >  1:2354217/1‑140 (MQ=255)

                                                        ttGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTAtctt                                                                               >  2:2149252/1‑140 (MQ=255)

                                                         tGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTAtcttc                                                                              <  1:2370456/140‑1 (MQ=255)

                                                          ggCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTAtcttct                                                                             >  1:2770708/1‑140 (MQ=255)

                                                            cGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACGTTTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTtctc                                                                            <  2:1266568/140‑1 (MQ=255)

                                                             ggTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTcgc                                                                          <  1:923443/140‑1 (MQ=255)

                                                                  ccATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAAt                                                                     <  2:2354217/140‑1 (MQ=255)

                                                                     tGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTa                                                                  <  2:1932212/140‑1 (MQ=255)

                                                                      gCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTAc                                                                 <  1:1300713/140‑1 (MQ=255)

                                                                         gATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGa                                                              >  1:1505062/1‑140 (MQ=255)

                                                                          aTGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGaa                                                             >  1:1470103/1‑140 (MQ=255)

                                                                          aTGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGaa                                                             >  2:425549/1‑140 (MQ=255)

                                                                           tGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAAt                                                            >  1:2494168/1‑140 (MQ=255)

                                                                               cTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAg                                                        >  1:2731507/1‑140 (MQ=255)

                                                                               cTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAg                                                        >  1:2659979/1‑140 (MQ=255)

                                                                                      cTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTtc                                                 <  2:1470103/140‑1 (MQ=255)

                                                                                       tGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTtct                                                >  1:2175959/1‑140 (MQ=255)

                                                                                        gATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTtctc                                               >  1:2297040/1‑140 (MQ=255)

                                                                                        gATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTtctc                                               >  1:1288609/1‑140 (MQ=255)

                                                                                        gATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGCTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTtctc                                               >  1:939361/1‑140 (MQ=255)

                                                                                         aTTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAAt                                                            >  2:319523/1‑126 (MQ=255)

                                                                                         aTTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAAt                                                            <  1:319523/126‑1 (MQ=255)

                                                                                         aTTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTctct                                              >  2:1434084/1‑140 (MQ=255)

                                                                                            aTGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACg                                           <  2:1240490/140‑1 (MQ=255)

                                                                                            aTGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACg                                           >  2:2735103/1‑140 (MQ=255)

                                                                                            aTGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACg                                           >  1:858402/1‑140 (MQ=255)

                                                                                             tgtgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATGTTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACga                                          >  2:1117650/1‑140 (MQ=255)

                                                                                             tgtgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACga                                          >  1:840897/1‑140 (MQ=255)

                                                                                             tgtgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACga                                          >  2:204501/1‑140 (MQ=255)

                                                                                              gtgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgag                                         >  1:2441088/1‑140 (MQ=255)

                                                                                              gtgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgag                                         <  1:204501/140‑1 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTg                                                    <  2:243811/128‑1 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTg                                                    >  1:243811/1‑128 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgagg                                        >  2:2145172/1‑140 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgagg                                        <  2:808366/140‑1 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgagg                                        >  1:1363149/1‑140 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgagg                                        >  2:638676/1‑140 (MQ=255)

                                                                                               tgACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgagg                                        >  2:1420519/1‑140 (MQ=255)

                                                                                                 aCAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgaggag                                      <  1:425549/140‑1 (MQ=255)

                                                                                                 aCAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgaggag                                      >  2:180795/1‑140 (MQ=255)

                                                                                                 aCAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgaggag                                      <  2:1288609/140‑1 (MQ=255)

                                                                                                 aCAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgaggag                                      >  1:1328428/1‑140 (MQ=255)

                                                                                                 aCAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACgaagag                                      <  2:1695571/140‑1 (MQ=255)

                                                                                                  cAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGt                                     <  2:1312469/140‑1 (MQ=255)

                                                                                                               tttACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACg                         >  1:312787/1‑140 (MQ=255)

                                                                                                                ttACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACgg                        >  2:818665/1‑140 (MQ=255)

                                                                                                                ttACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACgg                        >  1:1224184/1‑140 (MQ=255)

                                                                                                                ttACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACgg                        >  1:1499178/1‑140 (MQ=255)

                                                                                                                 tACCTTTTATTTATCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGc                       <  1:2145172/140‑1 (MQ=255)

                                                                                                                      tttatttaTCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGaaaa                  <  2:312787/140‑1 (MQ=255)

                                                                                                                       ttatttatCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAAc                 >  1:1372355/1‑140 (MQ=255)

                                                                                                                             atCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCAcc           >  2:2125109/1‑140 (MQ=255)

                                                                                                                             atCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCAcc           >  1:25134/1‑140 (MQ=255)

                                                                                                                             atCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCAcc           <  1:2735103/140‑1 (MQ=255)

                                                                                                                             atCTTATACCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCAcc           >  2:825213/1‑140 (MQ=255)

                                                                                                                                  ataCCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAg      >  2:1068065/1‑140 (MQ=255)

                                                                                                                                  ataCCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAg      >  1:1069634/1‑140 (MQ=255)

                                                                                                                                   taCCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGt     <  1:2149252/140‑1 (MQ=255)

                                                                                                                                   taCCCGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGt     >  2:2404725/1‑140 (MQ=255)

                                                                                                                                     cccGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCa   <  1:852775/140‑1 (MQ=255)

                                                                                                                                      ccGATATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCAc  <  2:2278355/140‑1 (MQ=255)

AAACGGTACTTACCGACACGCCCGCAGCCAGCGCAACATCATGAATGGTTATTTTTTTGGCGGTAGCCATGCAGATGACCTACTCCCTGATTATGTGACAGATAAAACG‑TTTTACCTTTTATTTATCTTATACCCGCTATTATCGTTGCGTAATGTGATTTATGCCTCACTAAAATTTGATAAAACGTTTTATCTTCTCGCGCAATTTACTGAATCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCAC  >  NC_000913/1699111‑1699383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`