BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	641,714	C→A	A52S (GCC→TCC)	uspG ←	universal stress protein G

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	641,714	0	C	A	100.0%	723.5 / NA	199	A52S (GCC→TCC)	uspG	universal stress protein G
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (103/96); total (103/96)

Only 100 of 201 total aligned reads displayed.

CTTCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCAT  >  NC_000913/641579‑641849

cTTCATCCCGCCCGCTTCCAAAACGGACATGTTGTTTAATTCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAaaaa                                                                                                                                     <  1:1715863/140‑1 (MQ=255)

cTTCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAaaaa                                                                                                                                     <  1:543896/140‑1 (MQ=255)

 ttCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAAc                                                                                                                                    <  1:2289310/140‑1 (MQ=255)

 ttCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAAc                                                                                                                                    <  1:222338/140‑1 (MQ=255)

  tCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACg                                                                                                                                   >  2:1694960/1‑140 (MQ=255)

   cATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACgg                                                                                                                                  >  1:1054375/1‑140 (MQ=255)

   cATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACgg                                                                                                                                  >  2:1008480/1‑140 (MQ=255)

   cATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACgg                                                                                                                                  >  1:2360335/1‑140 (MQ=255)

     tCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTg                                                                                                                                <  2:776332/140‑1 (MQ=255)

     tCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTg                                                                                                                                <  2:522717/140‑1 (MQ=255)

     tCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTg                                                                                                                                >  1:7638/1‑140 (MQ=255)

          cACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTg                                                                                                                                <  2:1298019/135‑1 (MQ=255)

               tACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGcaggctcagg                                                                                                                      <  1:1008480/140‑1 (MQ=255)

               tACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGcaggctcagg                                                                                                                      >  1:647386/1‑140 (MQ=255)

               tACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGGGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGcaggctcagg                                                                                                                      >  1:1474581/1‑140 (MQ=255)

                aCCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGcaggctcaggc                                                                                                                     >  2:962798/1‑140 (MQ=255)

                   aaaaCGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAggctgg                                                                                                                  <  2:271747/140‑1 (MQ=255)

                     aaCGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAggctggct                                                                                                                <  2:106558/140‑1 (MQ=255)

                     aaCGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAggctggct                                                                                                                <  1:511602/140‑1 (MQ=255)

                         gACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGAcc                                                                                                            <  2:1869309/140‑1 (MQ=255)

                         gACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGAcc                                                                                                            >  2:2199272/1‑140 (MQ=255)

                         gACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGAcc                                                                                                            >  1:2474860/1‑140 (MQ=255)

                           cATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCg                                                                                                          >  2:756229/1‑140 (MQ=255)

                            aTGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCgg                                                                                                         <  2:647386/140‑1 (MQ=255)

                              gttgttTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGgt                                                                                                       <  2:164135/140‑1 (MQ=255)

                              gttgttTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGgt                                                                                                       <  1:1633909/140‑1 (MQ=255)

                              gttgttTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGgt                                                                                                       <  2:80560/140‑1 (MQ=255)

                                    tAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACg                                                                                                 <  1:2576785/140‑1 (MQ=255)

                                    tAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACg                                                                                                 <  1:2656082/140‑1 (MQ=255)

                                      aTGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTg                                                                                               <  2:1027678/140‑1 (MQ=255)

                                      aTGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTg                                                                                               <  2:583658/140‑1 (MQ=255)

                                       tGCGGGAAGGATCGATGGTGAAGTGGCTGTCCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGa                                                                                              <  1:725731/140‑1 (MQ=255)

                                       tGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGa                                                                                              <  2:1418591/140‑1 (MQ=255)

                                          gggAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGt                                                                                           <  2:113989/140‑1 (MQ=255)

                                           ggAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTAc                                                                                                  >  1:2366666/1‑132 (MQ=255)

                                            gAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAg                                                                                         >  2:1545111/1‑140 (MQ=255)

                                            gAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAg                                                                                         >  2:2147141/1‑140 (MQ=255)

                                            gAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAg                                                                                         <  2:2360335/140‑1 (MQ=255)

                                            gAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAg                                                                                         <  1:2514380/140‑1 (MQ=255)

                                                   cGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATa                                                                                  <  2:1054375/140‑1 (MQ=255)

                                                    gATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATaa                                                                                 <  1:585575/140‑1 (MQ=255)

                                                    gATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATaa                                                                                 <  2:2378846/140‑1 (MQ=255)

                                                     aTGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAAc                                                                                <  1:1100223/140‑1 (MQ=255)

                                                       ggTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTc                                                                              >  2:779778/1‑140 (MQ=255)

                                                         tGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCg                                                                            <  2:2364947/140‑1 (MQ=255)

                                                         tGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCg                                                                            >  2:2757463/1‑140 (MQ=255)

                                                                gCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCt                                                                     >  1:1128658/1‑140 (MQ=255)

                                                                gCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCt                                                                     >  2:1649540/1‑140 (MQ=255)

                                                                gCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCt                                                                     >  1:1821005/1‑140 (MQ=255)

                                                                gCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCt                                                                     >  1:2426917/1‑140 (MQ=255)

                                                                gCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCt                                                                     >  1:2742702/1‑140 (MQ=255)

                                                                   gACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGTAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTggg                                                                  >  2:1108872/1‑140 (MQ=255)

                                                                         cGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAG‑AGATGAATAACTCCGTCATCCTGGGCGAGGaa                                                           >  2:34633/1‑140 (MQ=255)

                                                                           tttGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAG‑AGATGAATAACTCCGTCATCCTGGGCGAGGAAtt                                                         <  1:34633/140‑1 (MQ=255)

                                                                                   cGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTg                                                  >  1:934360/1‑140 (MQ=255)

                                                                                     ttCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGc                                                >  2:1959230/1‑140 (MQ=255)

                                                                                      tCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCg                                               >  2:1788034/1‑140 (MQ=255)

                                                                                      tCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGAGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGCAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCg                                               >  1:150149/1‑140 (MQ=255)

                                                                                        ttGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGaa                                             <  1:992555/140‑1 (MQ=255)

                                                                                                cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTg                                     <  1:1262966/140‑1 (MQ=255)

                                                                                                cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTg                                     >  1:369383/1‑140 (MQ=255)

                                                                                                cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTg                                     >  1:2734180/1‑140 (MQ=255)

                                                                                                cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTg                                     >  2:2741740/1‑140 (MQ=255)

                                                                                                  tGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTc                                   >  1:501732/1‑140 (MQ=255)

                                                                                                  tGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTc                                   >  2:2239702/1‑140 (MQ=255)

                                                                                                  tGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTc                                   >  2:476140/1‑140 (MQ=255)

                                                                                                     tGCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCt                                >  2:1332730/1‑140 (MQ=255)

                                                                                                      gCAGATGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTc                               <  2:2427734/140‑1 (MQ=255)

                                                                                                          aTGCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTGGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAAtt                           >  2:1843455/1‑140 (MQ=255)

                                                                                                            gCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCg                                  <  2:2275308/131‑1 (MQ=255)

                                                                                                            gCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTcc                         >  2:691521/1‑140 (MQ=255)

                                                                                                            gCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTcc                         >  2:2087149/1‑140 (MQ=255)

                                                                                                            gCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTcc                         >  1:566222/1‑140 (MQ=255)

                                                                                                            gCTCTTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTcc                         >  1:131772/1‑140 (MQ=255)

                                                                                                             ctctTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCa                        >  1:452806/1‑140 (MQ=255)

                                                                                                              tctTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCAt                       >  1:2599186/1‑140 (MQ=255)

                                                                                                               ctTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCAtt                      <  1:1332730/140‑1 (MQ=255)

                                                                                                               ctTCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATACAGCGTGGCGAACAGCTTTGTCGCTCAATTCCAtt                      <  2:1227371/140‑1 (MQ=255)

                                                                                                                ttCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCAttt                     >  2:721740/1‑140 (MQ=255)

                                                                                                                 tCAAAACGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGA‑‑‑‑‑‑CGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATAc              >  2:1827034/1‑140 (MQ=255)

                                                                                                                   aaaaCGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCaa                  <  2:1131546/140‑1 (MQ=255)

                                                                                                                   aaaaCGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCaa                  <  1:1980868/140‑1 (MQ=255)

                                                                                                                     aaCGACGCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAAt                >  1:403359/1‑140 (MQ=255)

                                                                                                                      acgacgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATa               >  2:938486/1‑140 (MQ=255)

                                                                                                                        gacgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACa             <  2:2599186/140‑1 (MQ=255)

                                                                                                                        gacgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACa             >  1:1485185/1‑140 (MQ=255)

                                                                                                                          cgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATc           >  2:295796/1‑140 (MQ=255)

                                                                                                                          cgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATc           >  2:1068932/1‑140 (MQ=255)

                                                                                                                          cgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATc           >  1:481009/1‑140 (MQ=255)

                                                                                                                          cgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATc           >  1:1219617/1‑140 (MQ=255)

                                                                                                                          cgCACATCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCAATTCAAATACATc           >  1:881198/1‑140 (MQ=255)

                                                                                                                            cacaTCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCaa         <  2:2513683/140‑1 (MQ=255)

                                                                                                                            cacaTCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCaa         <  2:501732/140‑1 (MQ=255)

                                                                                                                             acaTCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAAc        <  1:354587/140‑1 (MQ=255)

                                                                                                                                tCAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTgg     <  1:800530/140‑1 (MQ=255)

                                                                                                                                 cAGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGc    >  2:370996/1‑140 (MQ=255)

                                                                                                                                  aGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCa   <  1:779457/140‑1 (MQ=255)

                                                                                                                                  aGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCa   <  1:1190403/140‑1 (MQ=255)

                                                                                                                                  aGCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCa   <  2:1501369/140‑1 (MQ=255)

                                                                                                                                   gCGGAAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCAt  <  1:1828894/140‑1 (MQ=255)

CTTCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCAT  >  NC_000913/641579‑641849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`