BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,197,105	G→T	S143* (TCA→TAA)	ymfD ←	e14 prophage; putative SAM‑dependent methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,197,105	0	G	T	100.0%	580.2 / NA	161	S143* (TCA→TAA)	ymfD	e14 prophage; putative SAM‑dependent methyltransferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (86/75); total (86/75)

Only 100 of 161 total aligned reads displayed.

CGAGTTCATCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTGATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAACTGTATT  >  NC_000913/1196968‑1197241

cGAGTTCATCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTAt                                                                                                                                        >  2:1462628/1‑140 (MQ=255)

cGAGTTCATCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTAt                                                                                                                                        >  2:1819661/1‑140 (MQ=255)

cGAGTTCATCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTAt                                                                                                                                        >  1:158392/1‑140 (MQ=255)

  aGTTCATCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTAttt                                                                                                                                      <  1:1559251/140‑1 (MQ=255)

       aTCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTa                                                                                                                                 <  1:1324967/140‑1 (MQ=255)

           aGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAAtct                                                                                                                             >  1:1099281/1‑140 (MQ=255)

             tAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATctct                                                                                                                           >  2:57798/1‑140 (MQ=255)

             tAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATctct                                                                                                                           <  2:126337/140‑1 (MQ=255)

             tAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATctct                                                                                                                           <  2:1299877/140‑1 (MQ=255)

             tAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATctct                                                                                                                           >  2:503146/1‑140 (MQ=255)

                tCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGa                                                                                                                        >  1:2750203/1‑140 (MQ=255)

                  cATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATg                                                                                                                      <  1:2527429/140‑1 (MQ=255)

                    tAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCt                                                                                                                    <  2:2301772/140‑1 (MQ=255)

                    tAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCt                                                                                                                    <  2:2132629/140‑1 (MQ=255)

                    tAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCt                                                                                                                    <  1:1970190/140‑1 (MQ=255)

                    tAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCt                                                                                                                    <  2:187746/140‑1 (MQ=255)

                     aGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTa                                                                                                                   >  2:2517023/1‑140 (MQ=255)

                     aGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTa                                                                                                                   >  2:1692234/1‑140 (MQ=255)

                      gTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTaa                                                                                                                  >  2:2154802/1‑140 (MQ=255)

                       tAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTa                                                                                                                                 >  1:453146/1‑124 (MQ=255)

                       tAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAg                                                                                                                 <  1:57798/140‑1 (MQ=255)

                          gAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAAc                                                                                                              >  2:268077/1‑140 (MQ=255)

                          gAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAAc                                                                                                              >  1:586495/1‑140 (MQ=255)

                            aaCACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTa                                                                                                            >  2:1108350/1‑140 (MQ=255)

                              cacTTTTTGAATTTTTGTAAGTGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTAtt                                                                                                          <  1:750836/140‑1 (MQ=255)

                              cacTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTAtt                                                                                                          >  1:1382129/1‑140 (MQ=255)

                                 tttttGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTAtttt                                                                                                        >  1:1420280/1‑139 (MQ=255)

                                 tttttGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTg                                                                                                       >  1:1945567/1‑140 (MQ=255)

                                  ttttGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCGCCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGt                                                                                                      <  2:1188488/140‑1 (MQ=255)

                                      gAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGAt                                                                                                  <  1:2208368/140‑1 (MQ=255)

                                         tttttGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGt                                                                                               >  1:1447198/1‑140 (MQ=255)

                                           tttGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTAt                                                                                             <  1:1462628/140‑1 (MQ=255)

                                           tttGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTAt                                                                                             <  2:28065/140‑1 (MQ=255)

                                                       tCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGa                                                                                        <  1:2573744/133‑1 (MQ=255)

                                                       tCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGaa                                                                                 >  2:143481/1‑140 (MQ=255)

                                                           tAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGc                                                                             >  1:729503/1‑140 (MQ=255)

                                                            aaaGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCa                                                                            <  2:1487574/140‑1 (MQ=255)

                                                            aaaGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCa                                                                            <  1:2154802/140‑1 (MQ=255)

                                                            aaaGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCa                                                                            <  2:1942106/140‑1 (MQ=255)

                                                              aGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCaga                                                                          <  2:1447198/140‑1 (MQ=255)

                                                              aGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCaga                                                                          <  1:424489/140‑1 (MQ=255)

                                                                 tGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       <  2:1382129/140‑1 (MQ=255)

                                                                 tGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       >  1:1030977/1‑140 (MQ=255)

                                                                 tGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       <  2:2361136/140‑1 (MQ=255)

                                                                  gTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAgagaga                                                                      >  1:2479590/1‑140 (MQ=255)

                                                                   ttttCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGaa                                                                     >  1:860553/1‑140 (MQ=255)

                                                                   ttttCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGaa                                                                     <  2:1723639/140‑1 (MQ=255)

                                                                    tttCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAAc                                                                    >  2:899195/1‑140 (MQ=255)

                                                                       cttcCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACAtt                                                                 >  2:368740/1‑140 (MQ=255)

                                                                          ccTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTaga                                                              >  2:695196/1‑140 (MQ=255)

                                                                           cTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTagag                                                             >  1:2759043/1‑140 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       <  1:2001908/128‑1 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       >  2:2001908/1‑128 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCa                                                           >  2:891274/1‑140 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCa                                                           <  1:1468691/140‑1 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCa                                                           >  2:2057123/1‑140 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCa                                                           <  1:1108350/140‑1 (MQ=255)

                                                                             gTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCa                                                           <  2:1945567/140‑1 (MQ=255)

                                                                              tttCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       <  2:813559/127‑1 (MQ=255)

                                                                              tttCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       >  1:813559/1‑127 (MQ=255)

                                                                              tttCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCaa                                                          <  2:2750203/140‑1 (MQ=255)

                                                                                 cGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       <  2:1539863/124‑1 (MQ=255)

                                                                                 cGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCagagag                                                                       >  1:1539863/1‑124 (MQ=255)

                                                                                   tATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGAt                                                     <  2:2759043/140‑1 (MQ=255)

                                                                                        tttGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAAt                                                >  2:616554/1‑140 (MQ=255)

                                                                                          tGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCg                                              <  1:1715060/140‑1 (MQ=255)

                                                                                                 tGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTaa                                           >  1:1898566/1‑136 (MQ=255)

                                                                                                    gCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCaa                                    <  2:429296/140‑1 (MQ=255)

                                                                                                        ttATATTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAattat                                >  1:2090567/1‑140 (MQ=255)

                                                                                                         tataTTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAattatt                               >  1:1020345/1‑140 (MQ=255)

                                                                                                         tataTTGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAattatt                               >  2:1562418/1‑140 (MQ=255)

                                                                                                             ttGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGt                           >  2:93235/1‑140 (MQ=255)

                                                                                                              tGATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATCAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTc                          >  2:1040775/1‑140 (MQ=255)

                                                                                                               gATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCg                         >  2:1725101/1‑140 (MQ=255)

                                                                                                               gATTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCg                         >  2:2573199/1‑140 (MQ=255)

                                                                                                                aTTTACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGa                        >  2:2346595/1‑140 (MQ=255)

                                                                                                                 tttACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGAc                       <  1:368740/140‑1 (MQ=255)

                                                                                                                  ttACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACa                      <  1:1282536/140‑1 (MQ=255)

                                                                                                                  ttACAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACa                      >  1:1169760/1‑140 (MQ=255)

                                                                                                                     cAATAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCGAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATcc                   >  2:1199890/1‑140 (MQ=255)

                                                                                                                       aTAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTc                 <  1:2730170/140‑1 (MQ=255)

                                                                                                                        tAAGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCg                <  2:729503/140‑1 (MQ=255)

                                                                                                                         aaGAGTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGa               <  1:1725101/140‑1 (MQ=255)

                                                                                                                          agagTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTctaa              <  2:2368738/140‑4 (MQ=255)

                                                                                                                          agagTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGaa              >  2:1668574/1‑140 (MQ=255)

                                                                                                                          agagTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGaa              >  1:223460/1‑140 (MQ=255)

                                                                                                                             gTCTCACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGc           <  1:899195/140‑1 (MQ=255)

                                                                                                                              tctcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCa          <  2:223460/140‑1 (MQ=255)

                                                                                                                               ctcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCaa         >  1:1629473/1‑140 (MQ=255)

                                                                                                                                tcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAAc        >  2:2581616/1‑140 (MQ=255)

                                                                                                                                tcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAAc        >  2:632978/1‑140 (MQ=255)

                                                                                                                                tcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAAc        <  2:2090567/140‑1 (MQ=255)

                                                                                                                                tcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAAc        >  2:1894897/1‑140 (MQ=255)

                                                                                                                                tcACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAAc        >  1:31839/1‑140 (MQ=255)

                                                                                                                                 cACCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAACt       <  2:749033/140‑1 (MQ=255)

                                                                                                                                  aCCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTc                 <  2:445619/129‑1 (MQ=255)

                                                                                                                                  aCCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTc                 >  1:445619/1‑129 (MQ=255)

                                                                                                                                  aCCTCCTTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTA‑TTTGTCGACATCCTCGAAAGCAACTGt     >  1:1673723/1‑140 (MQ=255)

                                                                                                                                     tcctTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAACTGTAt   <  1:792404/140‑1 (MQ=255)

                                                                                                                                      cctTATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAACTGTAtt  >  2:2427012/1‑140 (MQ=255)

CGAGTTCATCGAGTAATCCATAGTAAGAAACACTTTTTGAATTTTTGTAAATGTATCCGTAAAGATGTTTTCTTCCTGTTTCGTATTTTTTGAAGTATGAGCTTTTATATTGATTTACAATAAGAGTCTCACCTCCTGATTTTAGTAATCTCTTGATGCTAAGAACTATTTTGTCGATTGTATCCCGACAAGGAACGGCAGAGAGAACATTAGAGCAAAGGATGAAATCGTAACCCCCAATTATTTTGTCGACATCCTCGAAAGCAACTGTATT  >  NC_000913/1196968‑1197241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`