BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,541,844	G→A	Y249Y (TAC→TAT)	narZ ←	nitrate reductase Z subunit alpha

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,541,844	0	G	A	100.0%	354.0 / NA	101	Y249Y (TAC→TAT)	narZ	nitrate reductase Z subunit alpha
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (47/54); total (47/54)

Only 100 of 106 total aligned reads displayed.

CTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGC  >  NC_000913/1541709‑1541979

cTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGc                                                                                                                                     <  2:236563/140‑1 (MQ=255)

cTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGc                                                                                                                                     <  2:714108/140‑1 (MQ=255)

cTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGc                                                                                                                                     <  1:2646318/140‑1 (MQ=255)

cTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGc                                                                                                                                     <  1:1857355/140‑1 (MQ=255)

cTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGc                                                                                                                                     <  1:1749943/140‑1 (MQ=255)

cTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGc                                                                                                                                     <  1:1528625/140‑1 (MQ=255)

 tGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCt                                                                                                                                    <  1:2755272/140‑1 (MQ=255)

 tGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCt                                                                                                                                    <  1:1396223/140‑1 (MQ=255)

          aaTTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTtata                                                                                                                           <  2:1463813/140‑1 (MQ=255)

              tGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAg                                                                                                                       >  1:2370273/1‑140 (MQ=255)

              tGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAg                                                                                                                       <  2:2494692/140‑1 (MQ=255)

                gCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTc                                                                                                                     <  2:455236/140‑1 (MQ=255)

                   aCTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGc                                                                                                                  <  1:637644/140‑1 (MQ=255)

                    cTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCa                                                                                                                 >  1:2190547/1‑140 (MQ=255)

                           gtagtCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCg                                                                                                          <  1:1537663/140‑1 (MQ=255)

                           gtagtCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCg                                                                                                          >  2:1170125/1‑140 (MQ=255)

                               tCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCa                                                                                                                 <  1:1323515/129‑1 (MQ=255)

                               tCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCa                                                                                                                 >  2:1323515/1‑129 (MQ=255)

                               tCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTAc                                                                                                      >  2:2462867/1‑140 (MQ=255)

                               tCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTAc                                                                                                      >  1:369418/1‑140 (MQ=255)

                               tCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTAc                                                                                                      >  1:1075128/1‑140 (MQ=255)

                               tCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGATATACCAGTCGGCAGATTCCGGTAc                                                                                                      >  1:1152253/1‑140 (MQ=255)

                                    ggTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCgg                                                                                                 >  2:804074/1‑140 (MQ=255)

                                    ggTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCgg                                                                                                 >  2:2686185/1‑140 (MQ=255)

                                      tAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGtt                                                                                               >  2:812499/1‑140 (MQ=255)

                                        aTGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTg                                                                                             >  2:1358095/1‑140 (MQ=255)

                                        aTGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTg                                                                                             >  1:519044/1‑140 (MQ=255)

                                         tGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGc                                                                                            >  2:2373549/1‑140 (MQ=255)

                                          ggCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  2:2370273/140‑1 (MQ=255)

                                          ggCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  2:1709007/140‑1 (MQ=255)

                                          ggCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  2:143631/140‑1 (MQ=255)

                                          ggCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  1:98850/140‑1 (MQ=255)

                                          ggCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  2:2494766/140‑1 (MQ=255)

                                          ggCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  1:2686185/140‑1 (MQ=255)

                                             gATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGc                                                                                        >  1:802344/1‑140 (MQ=255)

                                             gATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGT‑CGTCGGTTTGCTCGcc                                                                                       >  1:364513/1‑140 (MQ=255)

                                               tGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGccc                                                                                      >  2:499210/1‑140 (MQ=255)

                                                    ttAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGt                                                                                 <  2:889271/140‑1 (MQ=255)

                                                           cTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGc                                                                          >  2:147802/1‑140 (MQ=255)

                                                            tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           >  1:2427601/1‑122 (MQ=255)

                                                            tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  1:1225815/122‑1 (MQ=255)

                                                            tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           >  2:1225815/1‑122 (MQ=255)

                                                            tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCt                                                                                           <  2:2427601/122‑1 (MQ=255)

                                                            tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCg                                                                         >  2:2392459/1‑140 (MQ=255)

                                                              tGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAg                                                                       >  1:818721/1‑140 (MQ=255)

                                                                    gTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAggcgggc                                                                 >  1:249662/1‑140 (MQ=255)

                                                                     tACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAggcgggcg                                                                <  2:2655907/140‑1 (MQ=255)

                                                                      aCTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGgcgggcgg                                                               >  1:383339/1‑140 (MQ=255)

                                                                       cTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGggcggc                                                              >  1:765925/1‑140 (MQ=255)

                                                                        ttCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCa                                                             <  1:2392459/140‑1 (MQ=255)

                                                                        ttCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCa                                                             <  1:499210/140‑1 (MQ=255)

                                                                        ttCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCa                                                             <  2:1644755/140‑1 (MQ=255)

                                                                            gTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCa                                                             <  1:2157563/136‑1 (MQ=255)

                                                                            gTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCa                                                             >  2:2157563/1‑136 (MQ=255)

                                                                            gTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTc                                                         <  1:340369/140‑1 (MQ=255)

                                                                               aagaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCa                                                      >  2:699841/1‑140 (MQ=255)

                                                                                  aagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCaaaa                                                   >  2:1760499/1‑138 (MQ=255)

                                                                                   agTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATAc                                                  <  1:147802/140‑1 (MQ=255)

                                                                                    gTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATAcc                                                 >  2:1409927/1‑140 (MQ=255)

                                                                                     tGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCa                                                >  1:2432325/1‑140 (MQ=255)

                                                                                      gggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAg                                               >  1:792935/1‑140 (MQ=255)

                                                                                      gggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAg                                               <  2:793131/140‑1 (MQ=255)

                                                                                       ggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGt                                              >  1:2359280/1‑140 (MQ=255)

                                                                                       ggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGt                                              >  1:591457/1‑140 (MQ=255)

                                                                                       ggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGt                                              >  1:2565300/1‑140 (MQ=255)

                                                                                       ggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGACATCGGCGAGGCGGGGGGCAGGGCGCAATTcccgg                                              >  2:473704/1‑137 (MQ=255)

                                                                                       ggCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATAATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGgcgggcgg                                                               <  1:2119821/123‑1 (MQ=255)

                                                                                       ggCGTCCGGCGCACGTGTCTGCGGTACGTTAGACCCCCAGGCGATAATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGgcgggcgg                                                               >  2:2119821/1‑123 (MQ=255)

                                                                                          gTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCgg                                           >  2:2207055/1‑139 (MQ=255)

                                                                                           tCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTa                                          <  2:952244/140‑1 (MQ=255)

                                                                                           tCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTa                                          <  2:591321/140‑1 (MQ=255)

                                                                                           tCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTa                                          <  1:2462867/140‑1 (MQ=255)

                                                                                           tCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTa                                          <  2:1075128/140‑1 (MQ=255)

                                                                                            ccGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAg                                         <  2:765925/140‑1 (MQ=255)

                                                                                             cGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGa                                        <  1:804074/140‑1 (MQ=255)

                                                                                             cGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGa                                        >  1:2329405/1‑140 (MQ=255)

                                                                                              ggCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGaa                                       <  2:1152253/140‑1 (MQ=255)

                                                                                                 gTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACt                                    <  1:2369798/140‑1 (MQ=255)

                                                                                                    cGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTaa                                 <  2:519044/140‑1 (MQ=255)

                                                                                                          tGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGt                           <  2:2565300/140‑1 (MQ=255)

                                                                                                          tGCGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGt                           >  1:1811541/1‑140 (MQ=255)

                                                                                                            cGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTa                                          <  1:127557/123‑1 (MQ=255)

                                                                                                            cGGTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTa                                          >  2:127557/1‑123 (MQ=255)

                                                                                                            cGGTACGTTAGACCCCCAGGCGATGATATAGCT‑GAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTgcc                        >  1:239160/1‑140 (MQ=255)

                                                                                                             ggTACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTgcc                        >  2:1069546/1‑140 (MQ=255)

                                                                                                               tACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTgccgc                      <  2:591457/140‑1 (MQ=255)

                                                                                                               tACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTgccgc                      <  2:383339/140‑1 (MQ=255)

                                                                                                               tACGTTAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTgccgc                      <  2:2359280/140‑1 (MQ=255)

                                                                                                                   ttAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAag                  <  1:1170125/140‑1 (MQ=255)

                                                                                                                   ttAGACCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAag                  <  1:473704/140‑1 (MQ=255)

                                                                                                                       aCCCCCAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAagcagc              <  2:379758/140‑1 (MQ=255)

                                                                                                                         ccccAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGa            >  1:160532/1‑140 (MQ=255)

                                                                                                                         ccccAGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGa            >  2:1832820/1‑140 (MQ=255)

                                                                                                                            cAGGCGATGATATAGCT‑GAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGa        <  2:239160/140‑1 (MQ=255)

                                                                                                                             aGGCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGa        <  1:2443880/140‑1 (MQ=255)

                                                                                                                              ggCGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCCAGCAGCGACAGaa       >  2:1167139/1‑139 (MQ=255)

                                                                                                                                cGATGATATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATaa     <  1:1358095/140‑1 (MQ=255)

                                                                                                                                 gatgatATAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAAc    >  1:433779/1‑140 (MQ=255)

                                                                                                                                   tgataTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAAcgc  >  2:262817/1‑140 (MQ=255)

                                                                                                                                   tgataTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAAcgc  >  1:808452/1‑140 (MQ=255)

CTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGC  >  NC_000913/1541709‑1541979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`