BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,557,074	C→A	intergenic (+18/+38)	osmC → / ← ddpF	osmotically inducible peroxiredoxin/putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,557,074	0	C	A	100.0%	395.1 / NA	112	intergenic (+18/+38)	osmC/ddpF	osmotically inducible peroxiredoxin/putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (55/57); total (55/57)

Only 100 of 116 total aligned reads displayed.

GCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGCGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCAACGTTCGTA  >  NC_000913/1556937‑1557210

gCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGt                                                                                                                                        <  2:351243/140‑1 (MQ=255)

 cGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAATACAAAAGCAGGATGCCCGGTCTCGCAGGGACTGAAAGCGGAAATTACGCAGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTc                                                                                                                                       >  2:617839/1‑140 (MQ=255)

 cGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTc                                                                                                                                       >  1:650731/1‑140 (MQ=255)

   gTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAg                                                                                                                                     >  2:2064255/1‑140 (MQ=255)

   gTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAg                                                                                                                                     >  1:950967/1‑140 (MQ=255)

     gCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGgc                                                                                                                                   <  1:2479005/140‑1 (MQ=255)

      ccGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGgcg                                                                                                                                  <  1:500893/140‑1 (MQ=255)

        gggTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGcgcg                                                                                                                                >  1:285588/1‑140 (MQ=255)

        gggTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGcgcg                                                                                                                                >  2:1417136/1‑140 (MQ=255)

          gTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTg                                                                                                                              <  2:847060/140‑1 (MQ=255)

           tATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGa                                                                                                                             <  1:1822977/140‑1 (MQ=255)

           tATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGa                                                                                                                             <  1:934558/140‑1 (MQ=255)

                aTGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGcc                                                                                                                        <  2:950967/140‑1 (MQ=255)

                   ccTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGa                                                                                                                     >  2:631364/1‑140 (MQ=255)

                   ccTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGa                                                                                                                     >  2:2623580/1‑140 (MQ=255)

                    ctctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGAt                                                                                                                    >  1:822109/1‑140 (MQ=255)

                    ctctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGAt                                                                                                                    <  1:2473651/140‑1 (MQ=255)

                     tctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATg                                                                                                                   <  2:2119851/140‑1 (MQ=255)

                     tctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATg                                                                                                                   <  1:931973/140‑1 (MQ=255)

                     tctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATg                                                                                                                   <  1:1658677/140‑1 (MQ=255)

                     tctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATg                                                                                                                   <  1:2512442/140‑1 (MQ=255)

                      ctACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGc                                                                                                                  <  2:650731/140‑1 (MQ=255)

                       tACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCg                                                                                                                 <  1:1704324/140‑1 (MQ=255)

                       tACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCg                                                                                                                 <  1:1195779/140‑1 (MQ=255)

                        aCCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCgt                                                                                                                >  1:2586330/1‑140 (MQ=255)

                            ttGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGcc                                                                                                                        >  2:2592898/1‑128 (MQ=255)

                            ttGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGcc                                                                                                                        <  1:2592898/128‑1 (MQ=255)

                            ttGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCgttgtt                                                                                                            <  2:2586330/140‑1 (MQ=255)

                            ttGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCgttgtt                                                                                                            <  2:86563/140‑1 (MQ=255)

                            ttGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCgttgtt                                                                                                            >  2:2731272/1‑140 (MQ=255)

                             tGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGAt                                                                                                                    <  2:2498533/131‑1 (MQ=255)

                             tGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTa                                                                                                           >  2:1523015/1‑140 (MQ=255)

                             tGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTa                                                                                                           >  1:474294/1‑140 (MQ=255)

                              gACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAg                                                                                                          <  1:1930287/140‑1 (MQ=255)

                              gACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAg                                                                                                          >  1:2489002/1‑140 (MQ=255)

                               aCGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGc                                                                                                         <  1:2178242/140‑1 (MQ=255)

                                 ggCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCAt                                                                                                       <  2:1128877/140‑1 (MQ=255)

                                 ggCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCAt                                                                                                       <  1:2315050/140‑1 (MQ=255)

                                 ggCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCAt                                                                                                       >  2:1818012/1‑140 (MQ=255)

                                   cATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCAtct                                                                                                     >  1:2194825/1‑140 (MQ=255)

                                   cATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGACGCGTGAATGCCTGATGCGTTGTTAGCAtct                                                                                                     >  2:1770104/1‑140 (MQ=255)

                                      aaTCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTa                                                                                                  <  1:615233/140‑1 (MQ=255)

                                           aGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAgcg                                                                                             <  2:2194825/140‑1 (MQ=255)

                                           aGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAgcg                                                                                             <  1:1818012/140‑1 (MQ=255)

                                             aaagcaaaagcaGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGcgcc                                                                                           >  2:1807039/1‑140 (MQ=255)

                                             aaagcaaaagcaGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGcgcc                                                                                           >  2:526924/1‑140 (MQ=255)

                                                gcaaaagcaGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGcgcccgc                                                                                        >  1:960485/1‑140 (MQ=255)

                                                  aaaagcaGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCa                                                                                      >  2:356501/1‑140 (MQ=255)

                                                   aaagcaGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAg                                                                                     <  1:1680299/140‑1 (MQ=255)

                                                        aGGATGCCCGGTCTCTCAGTTACTAAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCg                                                                                <  2:273378/140‑1 (MQ=255)

                                                             gCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCt                                                                           <  2:1896545/140‑1 (MQ=255)

                                                                    ctctcAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCAcgtcc                                                                    >  1:683768/1‑140 (MQ=255)

                                                                       tcAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCAcgtccgtc                                                                 <  1:1286975/140‑1 (MQ=255)

                                                                       tcAGGTACTGAAAGCGGAAATTACGCGGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGACGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCAcgtccgtc                                                                 <  1:1770104/140‑1 (MQ=255)

                                                                           gTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGtcctcc                                                             >  1:917366/1‑140 (MQ=255)

                                                                             aCTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCt                                                           >  1:1107356/1‑140 (MQ=255)

                                                                             aCTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCt                                                           >  1:1899528/1‑140 (MQ=255)

                                                                             aCTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCt                                                           <  1:2064255/140‑1 (MQ=255)

                                                                             aCTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCt                                                           >  1:2327940/1‑140 (MQ=255)

                                                                               tGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACgtccgtcc                                                                <  2:2746390/133‑1 (MQ=255)

                                                                               tGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACgtccgtcc                                                                >  1:2746390/1‑133 (MQ=255)

                                                                               tGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTa                                                         >  1:1604679/1‑140 (MQ=255)

                                                                                 aaaGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCAcgtc                                                                     <  2:2636948/126‑1 (MQ=255)

                                                                                 aaaGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCAcgtc                                                                     >  1:2636948/1‑126 (MQ=255)

                                                                                 aaaGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTAtt                                                       >  2:1954310/1‑140 (MQ=255)

                                                                                   aGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGc                                                     >  2:2456912/1‑140 (MQ=255)

                                                                                   aGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGc                                                     <  1:2623580/140‑1 (MQ=255)

                                                                                     cGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTa                                                   >  1:1744911/1‑140 (MQ=255)

                                                                                     cGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTa                                                   >  1:404914/1‑140 (MQ=255)

                                                                                       gAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAAt                                                 <  1:1954310/140‑1 (MQ=255)

                                                                                       gAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAAt                                                 >  1:576105/1‑140 (MQ=255)

                                                                                               gCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCg                                         <  1:2706147/140‑1 (MQ=255)

                                                                                               gCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCg                                         <  2:2604646/140‑1 (MQ=255)

                                                                                                      tACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTca                                  <  2:1899528/140‑1 (MQ=255)

                                                                                                      tACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTca                                  <  2:1107356/140‑1 (MQ=255)

                                                                                                      tACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTca                                  <  1:1318883/140‑1 (MQ=255)

                                                                                                      tACCAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTca                                  <  2:822109/140‑1 (MQ=255)

                                                                                                        ccAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTca                                  <  1:120510/138‑1 (MQ=255)

                                                                                                        ccAGTTGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTca                                  >  2:120510/1‑138 (MQ=255)

                                                                                                            ttGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCg                            <  2:917366/140‑1 (MQ=255)

                                                                                                            ttGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCg                            <  1:631364/140‑1 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGa                                       <  2:1622765/128‑1 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGa                                       >  1:1622765/1‑128 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGt                           >  1:1765287/1‑140 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGt                           >  2:878012/1‑140 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGt                           >  2:2023150/1‑140 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGt                           >  1:1931334/1‑140 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGt                           >  2:1825358/1‑140 (MQ=255)

                                                                                                             tGAAATCGTAAAGCATTGCCGGATGACGACTCAGGCGCGTGAATGCCTGATACATTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCCCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGt                           >  2:2168011/1‑140 (MQ=255)

                                                                                                              gAAATCGTAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTg                          >  1:1952612/1‑140 (MQ=255)

                                                                                                                     tAAAGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGcc                   >  1:398814/1‑140 (MQ=255)

                                                                                                                       aaGCATTGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAg                 <  1:1807039/140‑1 (MQ=255)

                                                                                                                            ttGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGc            <  2:398814/140‑1 (MQ=255)

                                                                                                                            ttGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGc            <  2:1604679/140‑1 (MQ=255)

                                                                                                                            ttGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGCCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGc            >  1:1039591/1‑140 (MQ=255)

                                                                                                                             tGCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCa           >  2:1548941/1‑140 (MQ=255)

                                                                                                                              gCCGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCaa          <  1:1417136/140‑1 (MQ=255)

                                                                                                                               ccGGATGACGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCAAc         >  2:511128/1‑140 (MQ=255)

                                                                                                                                      aCGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCAACGTTCGTa  <  2:533909/140‑1 (MQ=255)

                                                                                                                                      aCGAGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCAACGTTCGTa  <  1:1548941/140‑1 (MQ=255)

GCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAAAGCATTGCCGGATGACGCGTCAGGCGCGTGAATGCCTGATGCGTTGTTAGCATCTCTACAGCGCCCGCCAGCACCGGAGCTCACGTCCGTCCTCCCTTATTGCTAATGATTGCCGGACTTCACATCCGTGGGTTGCCAGCGGGCAACGTTCGTA  >  NC_000913/1556937‑1557210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`