Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,111,7470GT28.7% 200.7 / 39.4 80N156K (AAC→AAA) yiiQDUF1454 domain‑containing protein YiiQ
Reads supporting (aligned to +/- strand):  ref base G (52/5);  new base T (0/23);  total (52/28)
Fisher's exact test for biased strand distribution p-value = 1.44e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

TTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGA  >  NC_000913/4111611‑4111883
                                                                                                                                           |                                                                                                                                        
tttGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACgtttgttt                                                                                                                                       <  1:253380/140‑1 (MQ=255)
  tGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGttttt                                                                                                                                     >  1:1252485/1‑140 (MQ=255)
      aTTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCACCCCC‑TTTT‑CGCCGTTGTCCGCGAAAACATAA‑CGCAGTGCCCCTTCTGTCTGGGTGTAATAACGTTTGTTTTCcccc                                                                                                                                 <  2:1702927/140‑1 (MQ=255)
       tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCccg                                                                                                                                >  1:82297/1‑140 (MQ=255)
       tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCccg                                                                                                                                >  1:133154/1‑140 (MQ=255)
            tCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGtt                                                                                                                           >  2:894697/1‑140 (MQ=255)
                aCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtagta                                                                                                                       >  2:1713858/1‑140 (MQ=255)
                     cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                  >  2:1988379/1‑140 (MQ=255)
                     cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                  >  1:879801/1‑140 (MQ=255)
                     cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                  >  1:2085417/1‑140 (MQ=255)
                     cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                  >  1:1486463/1‑140 (MQ=255)
                     cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                  >  2:577828/1‑140 (MQ=255)
                     cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGAGAc                                                                                                                  >  1:469004/1‑140 (MQ=255)
                       ggCGATTCAGATAGCCCCAGCTTAATCGGTTCAACAGCGAAGGTCACCCCC‑TTTT‑CGCCGTTGCCCGCGACAAAATAC‑CGCAGTGCCCCTTCTGTCTGGGTGTAATAACTTTTGTTTTTCCCCGCCGTTAGTAGCGACTg                                                                                                                <  2:1171605/139‑1 (MQ=255)
                        gCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGc                                                                                                               >  1:222438/1‑140 (MQ=255)
                            ttCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                           >  1:1037037/1‑140 (MQ=255)
                              cAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtttt                                                                                                         >  1:1682637/1‑140 (MQ=255)
                                gATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtttttt                                                                                                       >  1:1461400/1‑140 (MQ=255)
                                     cgcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTTGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGc                                                                                                  >  1:1942926/1‑140 (MQ=255)
                                      gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                 >  2:31837/1‑140 (MQ=255)
                                      gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                 >  1:503275/1‑140 (MQ=255)
                                      gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                 >  2:346456/1‑140 (MQ=255)
                                      cccattttAATCGTTACAAGAGGGAGGGCCCGCCCT‑TTTT‑CGCTTTTACCCGCGACAACACAA‑AGAATTGCCCCTTCTGTCAGGGTTAAACAATTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                 <  2:2085417/134‑1 (MQ=255)
                                           cTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgtg                                                                                            >  1:1692908/1‑140 (MQ=255)
                                           cTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgtg                                                                                            >  2:1382009/1‑140 (MQ=255)
                                              aaccgtttCAACAGCGAGGGTCAGCCCC‑TTTT‑CGCGTTTGCCCGCGACAAAATAG‑CGAGGTGCCCTTTCTGTCTGGTTTTATTATCTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGttt                                                                                         <  2:1222182/134‑1 (MQ=255)
                                               ttcgttccAACAGCGAAGGCCAGCCCT‑TTTT‑CGCCGTTGCCCGCGAAAACATAA‑CGCAGTGCCCTTTCTGTCTGGGTGTAATATTGTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGtttt                                                                                        <  2:1252485/133‑1 (MQ=255)
                                                tCGTTTCAACAGGGAAGGCCACCCCT‑TTTC‑CGCCGTTGCCCGCAAAAACATAC‑CGCATTGCCCCTTCTGTCTGGGTTTAATACCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTg                                                                                       <  2:503275/140‑1 (MQ=255)
                                                  gtttaaaCAGCGAGGGCCACCCCC‑TTTC‑CCCTTTTTCCCCCAAAAACATAC‑CGCGTTGCCCTTTCTGTTTCGGTTTAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                     <  2:1162175/135‑1 (MQ=255)
                                                  ggtcaaaCAGGGAGGGTCCCCCCT‑TTTC‑CGCGGTTGCCCGCGAAAACATAA‑CGCAGTCCCCCTTCTTTCTGGGTTTAATACCGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                     <  2:1011302/135‑1 (MQ=255)
                                                  ggtcaaaCAGCAAAGGCCACCCCT‑TTTC‑CCCCGTTGCCCGCGACAAAATAA‑CGCAGTGCCCTTTCTGTCTCGGTGTAATAATGTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                     <  2:227213/135‑1 (MQ=255)
                                                  ggtaaaaCAGCAAAGTCCACCCCT‑TTTC‑CGCCTTTGCCCGCAAAAACATAA‑CGCGGTCCCCCTTCTGTCTGGGTTAAATATTTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                     <  2:1115630/135‑1 (MQ=255)
                                                  ggTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCTCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                     <  1:1933385/140‑1 (MQ=255)
                                                    ttCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCa                                                                                   >  2:752586/1‑140 (MQ=255)
                                                    ttCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCa                                                                                   >  2:1782453/1‑140 (MQ=255)
                                                      cAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCAtt                                                                                 >  1:2160771/1‑140 (MQ=255)
                                                         cAGGGAAGGTCCTCCCCTTTTT‑CGCCGTGGCCCGCAACAACAGAA‑CGCGGTGCTCCTTCTTTCTCGGTGTAATATTGTTGTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTaa                                                                               <  2:1682637/140‑1 (MQ=255)
                                                              agggTCACCCCT‑TTTC‑CGCCGTTGCCGGCAACAACATAC‑CGCAGTCCCCCTTCTTTCCGGGTATAATATCTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                         <  2:1065912/138‑1 (MQ=255)
                                                              aaGGTCAGCCCT‑TTTC‑CGCTGTTGTCCGCGACAACATAC‑CGCAGTGCCCCTTCTGTCTGGGTGTAATAACGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                         <  2:1400933/140‑1 (MQ=255)
                                                              aaGGCCACCCCT‑TTTT‑CGGCGTTGTCCGCTACAA‑ATAAGCGACGTGCTCCTTCTGCCTGTGTATAATATTTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                         <  2:1815301/140‑1 (MQ=255)
                                                              aaGGCCACCCCT‑TTTC‑CGCCGTTGTCCGCGACAACATAC‑CGCAGTGCCCTTTCTGTCTGGGTGTAATATCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                         <  2:1895435/140‑1 (MQ=255)
                                                               agggccccccc‑TTTTCCCCCTTTGCCCGCAAAAAAATAA‑CGCGGTGCCCTTTCTGTCTGGGTTTAATAGTTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                         <  2:1704994/133‑1 (MQ=255)
                                                               aaggccccccc‑TTTTCCGCCGTTGCCCGCAACAACATAC‑CGCGGTCCCCCTTCTGTCTGGGTGAAATACTTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                         <  2:1456323/133‑1 (MQ=255)
                                                                 ggccacccc‑TTTTCCGCCTTTGCCCGCAACAACATAA‑CGCAGTGCCCCTTCTGTCTGGGTTTAATATCGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGa                                                                       <  2:1467399/135‑1 (MQ=255)
                                                                     ccccc‑TTTT‑CGCCGTTGTCCGCAACAACATAA‑CGCAGTCCCCCTTCTGTCTGGGTGTAATATGTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGtgtg                                                                  <  2:665712/139‑1 (MQ=255)
                                                                        cc‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCgg                                                               >  2:1800480/1‑140 (MQ=255)
                                                                        cc‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCgg                                                               >  2:133609/1‑140 (MQ=255)
                                                                            ttt‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATc                                                            >  2:645458/1‑140 (MQ=255)
                                                                            ttt‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATc                                                            >  1:1125658/1‑140 (MQ=255)
                                                                                 cccGTTGTCCGAAACAACATAA‑CGCAGTGCCCCTTTTGTCTGGTTTTAATATTTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCg                                                        <  2:1485096/139‑1 (MQ=255)
                                                                                  cgtttGCCCGCAAAAACTAAA‑CGGAGTGCCCCTTTTGTCTTGTTGTAATATCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGc                                                       <  2:1942926/137‑1 (MQ=255)
                                                                                    gTTGTCCGCGAAAACATAG‑CGCGTTCCCCCTTCTTTCTCGGTATAATACTTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTg                                                     <  2:1565611/140‑1 (MQ=255)
                                                                                    gTTGCCCGCGACAACATAC‑CGCAGTGCCCCTTCTGTCTGGGTGTAATAATGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTg                                                     <  2:222438/140‑1 (MQ=255)
                                                                                    gTTGCCCGCGAAAACATAC‑CGCAGTGCCCTTTCTTTCTGGGTGTAATATCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTg                                                     <  1:1264816/140‑1 (MQ=255)
                                                                                    gTTGCCCGCAAAAACATAA‑CGCAGTGCCCTTTCTGTCTGGGTGTAATAATTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTg                                                     <  2:2160771/140‑1 (MQ=255)
                                                                                      tGTCCGCGACAACATAC‑CGCAGTGCCCTTTCTGTCTGGGTGTAATAATTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGcc                                                   <  2:1727625/140‑1 (MQ=255)
                                                                                      tGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGcc                                                   >  2:678650/1‑140 (MQ=255)
                                                                                          cgcgACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGt                                               >  1:2184585/1‑140 (MQ=255)
                                                                                                  caTAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGa                                       >  1:692164/1‑140 (MQ=255)
                                                                                                  caTAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGa                                       >  1:765062/1‑140 (MQ=255)
                                                                                                        cctggTGCACTTTTTGTCTCGGTTTATAAATTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgcttt                                  <  2:1496297/136‑1 (MQ=255)
                                                                                                          cAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcg                                >  2:2148576/1‑140 (MQ=255)
                                                                                                          cAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcg                                >  2:1464539/1‑140 (MQ=255)
                                                                                                             tGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctt                             >  2:248172/1‑140 (MQ=255)
                                                                                                             tGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctt                             >  1:1170115/1‑140 (MQ=255)
                                                                                                             tGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctt                             >  1:94989/1‑140 (MQ=255)
                                                                                                             tGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctt                             >  2:106273/1‑140 (MQ=255)
                                                                                                             tGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctt                             >  1:1868431/1‑140 (MQ=255)
                                                                                                             tGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctt                             >  2:1130370/1‑140 (MQ=255)
                                                                                                               ccctttCTGTCTGGGTGTAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgctttc                           <  1:843462/136‑1 (MQ=255)
                                                                                                                 ccTTTTGTCTGGGTGTAATATCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCtttcgctttcgc                         <  2:1486463/140‑1 (MQ=255)
                                                                                                                  cTTCTGTCTGGGTGAAATATTTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTcgcg                        <  1:31837/140‑1 (MQ=255)
                                                                                                                       ttctgGGTGTAATACCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                   <  1:1988379/139‑1 (MQ=255)
                                                                                                                       gTCTCGGTTTAATATCTTTTTTTTCTCCCCGCCGTTAGTAGCGACTGCAGTTCTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                   <  1:1713858/140‑1 (MQ=255)
                                                                                                                       gTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGGTTTTTCTGGCTTTGCGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                   >  2:1710931/1‑140 (MQ=255)
                                                                                                                         cggggTGTAATATTTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttttt                 <  2:166306/137‑1 (MQ=255)
                                                                                                                            ggTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGct              >  2:204415/1‑140 (MQ=255)
                                                                                                                            ggTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGct              >  1:631067/1‑140 (MQ=255)
                                                                                                                            ggTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGct              >  2:274903/1‑140 (MQ=255)
                                                                                                                             gtgtAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCCTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctc             >  1:1606702/1‑140 (MQ=255)
                                                                                                                             gtgaAATTACGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctc             <  2:1267973/140‑1 (MQ=255)
                                                                                                                              tgtAATACCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCCTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctct            <  2:1606702/140‑1 (MQ=255)
                                                                                                                              tgtAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctct            >  2:1391868/1‑140 (MQ=255)
                                                                                                                              tgtAAAAGCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctct            <  1:1084759/140‑1 (MQ=255)
                                                                                                                                 aataaCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGc         <  2:1037037/140‑1 (MQ=255)
                                                                                                                                  ataaCGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGcc        <  1:678650/140‑1 (MQ=255)
                                                                                                                                  ataaCGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGcc        <  1:1382009/140‑1 (MQ=255)
                                                                                                                                      ttttttttttCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg    <  2:469004/138‑1 (MQ=255)
                                                                                                                                      cGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg    >  2:1509558/1‑140 (MQ=255)
                                                                                                                                      cGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg    >  1:1293443/1‑140 (MQ=255)
                                                                                                                                      cGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg    <  1:1130370/140‑1 (MQ=255)
                                                                                                                                      cGTTTGTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg    <  1:2148576/140‑1 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  2:2041643/1‑140 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  2:425775/1‑140 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  2:43358/1‑140 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  1:1886543/1‑140 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  1:1294573/1‑140 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  1:1273432/1‑140 (MQ=255)
                                                                                                                                        tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa  >  2:972134/1‑140 (MQ=255)
                                                                                                                                          tgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg    >  1:2104053/1‑136 (MQ=255)
                                                                                                                                           |                                                                                                                                        
TTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCC‑TTTT‑CGCCGTTGTCCGCGACAACATAA‑CGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGA  >  NC_000913/4111611‑4111883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑