Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,568,5040TG36.2% 275.8 / 25.9 151T6P (ACC→CCC) mdtMmultidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base T (29/66);  new base G (54/0);  total (85/66)
Fisher's exact test for biased strand distribution p-value = 1.31e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 155 total aligned reads displayed.

GGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAA  >  NC_000913/4568369‑4568642
                                                                                                                                       |                                                                                                                                           
  gCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaa                                                                                                                                       >  2:1990785/1‑140 (MQ=255)
   ccAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaa                                                                                                                                      <  2:1431573/140‑1 (MQ=255)
       aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTg                                                                                                                                  <  1:1990785/140‑1 (MQ=255)
       aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTg                                                                                                                                  >  2:1684175/1‑140 (MQ=255)
        cTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTgg                                                                                                                                 >  1:703604/1‑140 (MQ=255)
          gACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaaaaaaacaagca                                                                                                                               >  2:252607/1‑133 (MQ=255)
           aCATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCaa                                                                                                                              >  2:53758/1‑139 (MQ=255)
                 gCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCGAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATaaaaaa                                                                                                                        >  2:1479492/1‑140 (MQ=255)
                 gCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGGATaaaaaa                                                                                                                        >  1:1924091/1‑140 (MQ=255)
                  cATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATaacaaac                                                                                                                       <  1:336726/140‑1 (MQ=255)
                  cATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATaacaa                                                                                                                         >  1:1477294/1‑138 (MQ=255)
                       aaaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAGGGCATAACAAACAACTc                                                                                                                  >  2:817704/1‑140 (MQ=255)
                            aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAAAAAACAACACCTTGt                                                                                                             >  2:197431/1‑140 (MQ=255)
                             cGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATAC‑AAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTcc                                                                                                           <  1:49694/140‑1 (MQ=255)
                                      ttAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAAGGCATAAAAAAAAACTCCTTGTCCCGAG‑aaac                                                                                                  >  2:1285194/1‑138 (MQ=255)
                                        aaTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACTCCTTGTCCGGGG‑AAcccc                                                                                                >  2:1855283/1‑140 (MQ=255)
                                         aTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGCGGCATAAAAAAAAAATCCTTGTCCCGGG‑AAccccc                                                                                               >  1:858057/1‑139 (MQ=255)
                                            aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAACTCCTTGTCCGGAG‑AACCCCAACg                                                                                            >  1:617531/1‑140 (MQ=255)
                                            aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAAAACCCTGTCCGGGG‑AACCCCAACg                                                                                            >  2:332010/1‑140 (MQ=255)
                                            aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAATCCTTTTCCGGAG‑AACCCCAACg                                                                                            >  2:1713352/1‑140 (MQ=255)
                                              cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACggg                                                                                          >  1:138420/1‑140 (MQ=255)
                                              cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACggg                                                                                          >  1:816945/1‑140 (MQ=255)
                                              cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAACTCCTTGTCCGGAG‑AACCCCAACggg                                                                                          >  1:1787645/1‑140 (MQ=255)
                                              cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACTCCCTTTTCCGAG‑AACCCCAAAggg                                                                                          >  2:662984/1‑140 (MQ=255)
                                               ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGTGGCATGGCGGGGAAAAAAAAGGGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACgggg                                                                                         >  1:227255/1‑140 (MQ=255)
                                               ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAAAAAACAACTCCTTGTCCGGAG‑AACCCCAACaggg                                                                                         >  1:2068592/1‑140 (MQ=255)
                                               ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAACAAACAACCCCTTGTCCGGGG‑AACCCCAACgggg                                                                                         >  1:417091/1‑140 (MQ=255)
                                               ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACTCCTTTTCCGGAG‑AACCCCAACgggg                                                                                         >  1:1612056/1‑140 (MQ=255)
                                               ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTCGGATAACAAACAACTCCTTGTCCGGGG‑GAACCCAAAgggg                                                                                         >  1:2117110/1‑140 (MQ=255)
                                                 aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGaa                                                                                       >  1:1877918/1‑140 (MQ=255)
                                                 aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGGGGCATAAAAAACAACTCCTTTTCCCGGG‑GACCCCAACAGGGaa                                                                                       >  1:464918/1‑140 (MQ=255)
                                                 aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAATGGCATAAAAAAAAACCCCTTTTCCGGGG‑AAACCCAACggggga                                                                                       >  2:1628810/1‑138 (MQ=255)
                                                   gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGaaaa                                                                                     <  1:662984/140‑1 (MQ=255)
                                                   gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAAAAAAAAACTCCCTTTCCGGAG‑AACCCCAACGGGGaaaa                                                                                     >  1:279760/1‑140 (MQ=255)
                                                   gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAACAAAAAACCCCTTGTCCGGAG‑AACCCCAACGGGGaaaa                                                                                     >  1:1983402/1‑140 (MQ=255)
                                                   gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACCCCTTTTTCGGGG‑AAACCCCACGGGGgaaa                                                                                     >  2:1551713/1‑140 (MQ=255)
                                                     tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGTGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACg                                                                                   <  1:2029398/140‑1 (MQ=255)
                                                     tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACg                                                                                   <  2:138420/140‑1 (MQ=255)
                                                     tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACg                                                                                   <  1:1285194/140‑1 (MQ=255)
                                                     tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACg                                                                                   <  1:2197513/140‑1 (MQ=255)
                                                      ggATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGa                                                                                  <  2:1112798/140‑1 (MQ=255)
                                                       gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTGCTTGTCCGGAG‑AACCCCAACGGGGAAAACGaa                                                                                 <  2:1877918/140‑1 (MQ=255)
                                                       gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACAGGGGATAAAAAACAACCCCTTGTTCGGAG‑AACCCCCACCGGGGAAACaaa                                                                                 >  1:2081689/1‑140 (MQ=255)
                                                       gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAACAAAAAACTCCTTGTCCGGAG‑AACCCCAACGGGGGAAAAGaa                                                                                 >  2:748880/1‑140 (MQ=255)
                                                       gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAATCCTTGTCCGGAG‑AACCCCCACGGGGGAAAAGaa                                                                                 >  2:2197513/1‑140 (MQ=255)
                                                        aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGCGGCATAACAAAAAAACCCCTGTCCGGGG‑AAACCCCACGGGGGAAAAGaaa                                                                                >  2:1295887/1‑140 (MQ=255)
                                                        aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAACAACTCCTTTTCCGGAG‑AACCCCCACAGGGGAAAAGaaa                                                                                >  1:1020727/1‑140 (MQ=255)
                                                        aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAATCCTTTTCCGGAG‑AAACCCAACGGGGaaaaaaaaa                                                                                >  1:561421/1‑135 (MQ=255)
                                                        aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGCAAAAAAAAGGGGCATAACAAAAAACTCCTTTTCCGGAG‑AACCCCCACGGGGgaaaaaaaa                                                                                >  1:190563/1‑135 (MQ=255)
                                                        aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGCAAAAAAAAGACGGCTAACAAACAACCCCCTGTCCCGAG‑GACTCCAACCGGGGAAACCaaa                                                                                >  2:302022/1‑140 (MQ=255)
                                                            gATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCa                                                                            <  1:451477/140‑1 (MQ=255)
                                                             aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGGGGGATAAAAAAAAACTCCTTGTCCGGAG‑AACCCCAACGGGGGAAAAGAAAATCaa                                                                           >  1:404550/1‑140 (MQ=255)
                                                                 gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATAcc                                                                       <  1:817704/140‑1 (MQ=255)
                                                                 gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGATAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAGCGTGGCATAACAAACAGCTCCTTTTCTGGAG‑AACCCCATCGGGGAAAACGAAATTCAATAcc                                                                       <  2:1243136/140‑1 (MQ=255)
                                                                  tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGACATGGCGGGGAAAAAAAAGCGGCATAACAAACAACTCCCTGTCTGGAG‑AACCCCAACGGGGGAAAAGAAAATCAAAAccc                                                                      >  2:2050085/1‑139 (MQ=255)
                                                                         aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGTTAAAAAAAAGTTGCGAAACAAAAAAATACCTGTCCGGAG‑AACCCCAACAGGGGAAACAAAAATAAAAACCGCCgggga                                                               >  2:1522151/1‑137 (MQ=255)
                                                                           aCGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAAAAAAAAACTCCTTGTCCGGAG‑AAACCCCACGGGGGAAAAGAAAATTAAAAACGTCGGGAAta                                                             >  2:922132/1‑139 (MQ=255)
                                                                            cGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGa                                                            <  1:1400475/140‑1 (MQ=255)
                                                                              cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg                                                          <  1:972011/140‑1 (MQ=255)
                                                                              cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg                                                          <  1:252607/140‑1 (MQ=255)
                                                                                gcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGaa                                                        <  1:96005/140‑1 (MQ=255)
                                                                                 caAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGaaa                                                       <  1:1045930/140‑1 (MQ=255)
                                                                                 caAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGaaa                                                       <  1:197431/140‑1 (MQ=255)
                                                                                   aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTGAAAAAACGAGGCATAACAAAAAAATCCCTGTCCCGGG‑AACCCCCACCGGGGAAACAAAATTCAAAAACGTCGGGAAAGaaaaaaag                                                     >  2:2176588/1‑133 (MQ=255)
                                                                                   aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCAGAAAAAAAAACTCCTTGTCCCGGG‑AAACCCCACCGGGAAAAAGAAAATCAATACCCTCGGGAATGACGaaaag                                                     >  2:428528/1‑138 (MQ=255)
                                                                                    aGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGGGGGATAACAAACAACTCCCTATCCGGAG‑GAACCCAACGGGGGAAACGAAAATAAAAAACGTCGGGAATGACGAAAAGc                                                    >  2:256081/1‑140 (MQ=255)
                                                                                           cAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgag                                             <  2:1731433/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  1:559226/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  1:1237226/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  1:125506/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  2:703604/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  1:844906/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  1:257434/140‑1 (MQ=255)
                                                                                            aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGATAAAAAAACGTGGCATAACAAACATCTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                            <  2:2108506/140‑1 (MQ=255)
                                                                                              aaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAATGGCATAACAAACAACTCCTTGTCCGGGG‑AAACCAAACGGGGGAAAAGAAAATCAATACCGTCGGGAATGACGAAAGGCAGGGGAGAAg                                          >  2:1617902/1‑140 (MQ=255)
                                                                                               aTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGGATAAAAAAAAAATCCTTTTCCGGGG‑AACCCCAACGGGGAAAAAGAAATTAAATACCCTCGGTAATGACGAAAGGCAGGGGGGAAgg                                         >  2:1354353/1‑140 (MQ=255)
                                                                                                    cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGAGGGATAAAAAAAAACTCCTTGTTCGGGGAAACCCAAACGGGGAAAA‑GAAAATTAATAACCTCGGTAATGACGAAAAGGCGGGGAGAAGGGGaaa                                    >  2:2093027/1‑139 (MQ=255)
                                                                                                      ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga                                  <  1:302022/140‑1 (MQ=255)
                                                                                                         gacagAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc                               <  1:759506/136‑1 (MQ=255)
                                                                                                           gggAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTg                             <  1:1788591/140‑1 (MQ=255)
                                                                                                              aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa                          <  2:54383/140‑1 (MQ=255)
                                                                                                              aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa                          <  1:1419200/140‑1 (MQ=255)
                                                                                                                aaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAAt                        <  1:1701501/140‑1 (MQ=255)
                                                                                                                 aaCAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCAAAACAAACAAACCCTTGTCCGGGG‑AACCCCCACCGGGAAAAAGAAAATCAAAACCGTCCGGTATGAAGAAAGGGAGGGGGGGAGGGCAACAAGACTGGaaaag                       >  2:794085/1‑138 (MQ=255)
                                                                                                                   cAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTa                     <  2:19258/140‑1 (MQ=255)
                                                                                                                     gCGTGGCGGCATGGCGGGTAAAAAAAACGGGGATAAAAAAAAAACCCTTTTCCGGGG‑AACCCCAAGGGGGAAAAGAAAATTAAAAACCCCCGGGAATGAGGAAAGGAGGGGGAGAAGGGAAACGGACCGGCAAATgaatt                   >  2:566032/1‑136 (MQ=255)
                                                                                                                      cGTGGCGGCATGGCGGGTAAAAAAACGCGGCATAAAAAACAACCCCTTGTCCGGAG‑AACCCCAACGGGGGAAACGAAAATCAATACCCCCGGTAATGACGAAAGACAGGGGGGAAGGGGAAAGAGAATGCAAAAGTACTg                  >  2:1843808/1‑140 (MQ=255)
                                                                                                                         ggcggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAAt               <  2:476476/140‑1 (MQ=255)
                                                                                                                         ggcggcATGGCGGGTAAAAAAACGTGGCATAACAAAAAACTCCCTGTTCGGGGAAACCCCAAGGGGGAAAA‑GAAAATCAATACCCTCGGGAAAGGCGAAAAGCAGGGGAGAAGGGGCACGAGACAGCAAATGGAcccgtc               >  2:759506/1‑135 (MQ=255)
                                                                                                                         ggcggcATGGCGGGTAAAAAAACGTGGCATAAAAAAAAACTCCTTGTCCGGAG‑AAACCCCACGGGGGAAAAGAAAATCAATAACGTCGGTAATGACGAAAAGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAAt               >  2:606333/1‑140 (MQ=255)
                                                                                                                            ggcATGGCGGGGAAAAAAAAGGGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCCACGGGGGAAAAGAAAATCAATACCGTCGGGAATGACGAAAAGCAGGGGAGAAGGGGAACGAGAATGCAAATGTACTGAAtttt            >  2:1679721/1‑139 (MQ=255)
                                                                                                                             gcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCa           <  2:1546506/140‑1 (MQ=255)
                                                                                                                              cATGGCGGGGAAAAAAAAGAGGCATAACAAAAAACTCCTTGTCCGGAG‑AACCCCAACGGGGGAAAAGAAAATCAATAACGTCGGGAATGACGAAAAGCAGGGGAGAAGGGCAACGAGACTGCAAAAGTACTGAAATTCAt          >  2:1824764/1‑140 (MQ=255)
                                                                                                                               aTGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATg         <  1:686268/140‑1 (MQ=255)
                                                                                                                               aTGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATg         <  2:404550/140‑1 (MQ=255)
                                                                                                                                 ggCGGGTAAAAAAACGTGGCATAATAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa       <  1:318001/140‑1 (MQ=255)
                                                                                                                                 ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa       <  1:1679721/140‑1 (MQ=255)
                                                                                                                                 ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa       <  1:1713352/140‑1 (MQ=255)
                                                                                                                                   cGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAt     <  1:1522151/140‑1 (MQ=255)
                                                                                                                                      gTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCaa  <  1:1641071/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                           
GGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAG‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAA  >  NC_000913/4568369‑4568642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑