Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 38,805 C→A R104L (CGT→CTT)  caiB ← gamma‑butyrobetainyl‑CoA:carnitine CoA transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091338,8050CA100.0% 483.8 / NA 135R104L (CGT→CTT) caiBgamma‑butyrobetainyl‑CoA:carnitine CoA transferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (67/68);  total (67/68)

Only 100 of 137 total aligned reads displayed.

AACCACTAAAGGCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCACGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGGAGAGTTGC  >  NC_000913/38668‑38939
                                                                                                                                         |                                                                                                                                      
aaCCACTAAAGGCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCaaga                                                                                                                                      <  2:802139/140‑1 (MQ=255)
  ccACTAAAGGCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCaagacg                                                                                                                                    >  2:868648/1‑140 (MQ=255)
      tAAAGGCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCa                                                                                                                                >  1:647280/1‑140 (MQ=255)
        aaGGCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCaaa                                                                                                                              >  1:133838/1‑140 (MQ=255)
           gCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGc                                                                                                                           <  1:160942/140‑1 (MQ=255)
           gCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGc                                                                                                                           <  2:367266/140‑1 (MQ=255)
           gCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGc                                                                                                                           <  1:1980506/140‑1 (MQ=255)
             cTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCg                                                                                                                         <  1:1486371/140‑1 (MQ=255)
                ggCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGTCCGGAc                                                                                                                      >  2:39707/1‑140 (MQ=255)
                ggCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGAc                                                                                                                      >  2:1182126/1‑140 (MQ=255)
                ggCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGAc                                                                                                                      >  1:1731572/1‑140 (MQ=255)
                ggCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGAc                                                                                                                      >  1:1475434/1‑140 (MQ=255)
                ggCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGAc                                                                                                                      >  2:1058326/1‑140 (MQ=255)
                ggCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGAc                                                                                                                      >  2:780639/1‑140 (MQ=255)
                 gCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGAcc                                                                                                                     <  1:1236569/140‑1 (MQ=255)
                     tAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTa                                                                                                                 <  2:1332999/140‑1 (MQ=255)
                     tAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTa                                                                                                                 >  2:614773/1‑140 (MQ=255)
                     tAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTa                                                                                                                 >  2:1640748/1‑140 (MQ=255)
                     tAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTa                                                                                                                 >  1:1813652/1‑140 (MQ=255)
                       gtgtTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACt                                                                                                               <  1:1717015/140‑1 (MQ=255)
                          ttATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGc                                                                                                            >  1:882476/1‑140 (MQ=255)
                             taGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTc                                                                                                         <  1:442268/140‑1 (MQ=255)
                               ggCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGTACCTTTACTGGCTTCGa                                                                                                       >  2:1943616/1‑140 (MQ=255)
                                gCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGAt                                                                                                      <  2:1733351/140‑1 (MQ=255)
                                 ccGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATg                                                                                                     <  1:1737179/140‑1 (MQ=255)
                                 ccGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATg                                                                                                     <  2:239980/140‑1 (MQ=255)
                                  cGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGc                                                                                                            >  1:2100071/1‑132 (MQ=255)
                                  cGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCt                                                                                                           <  2:1230742/133‑1 (MQ=255)
                                  cGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGa                                                                                                    >  2:1098455/1‑140 (MQ=255)
                                   ggAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGaa                                                                                                   <  1:1447575/140‑1 (MQ=255)
                                    gAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAg                                                                                                  >  1:2128136/1‑140 (MQ=255)
                                          tGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCg                                                                                            <  2:2042010/140‑1 (MQ=255)
                                          tGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCg                                                                                            >  2:73816/1‑140 (MQ=255)
                                          tGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCg                                                                                            <  2:1542594/140‑1 (MQ=255)
                                             tgtACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCggtg                                                                                         <  1:209906/140‑1 (MQ=255)
                                               tACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCggtggt                                                                                       >  2:971939/1‑140 (MQ=255)
                                               tACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCggtggt                                                                                       <  1:1058326/140‑1 (MQ=255)
                                                 ctcctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGttt                                                                                     >  2:590463/1‑140 (MQ=255)
                                                   cctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTcc                                                                                   >  1:1479674/1‑140 (MQ=255)
                                                    ctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCggtggt                                                                                       <  2:544201/135‑1 (MQ=255)
                                                    ctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCggtggt                                                                                       >  1:544201/1‑135 (MQ=255)
                                                    ctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCa                                                                                  >  1:1890067/1‑140 (MQ=255)
                                                    ctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCa                                                                                  <  1:1605231/140‑1 (MQ=255)
                                                    ctcGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCa                                                                                  >  1:1249353/1‑140 (MQ=255)
                                                      cGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCAtt                                                                                <  2:133838/140‑1 (MQ=255)
                                                      cGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCAtt                                                                                <  1:614773/140‑1 (MQ=255)
                                                       ggTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTa                                                                               >  1:1077505/1‑140 (MQ=255)
                                                       ggTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTa                                                                               >  1:1407697/1‑140 (MQ=255)
                                                         tGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAAt                                                                             >  2:1825913/1‑140 (MQ=255)
                                                           ccGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAAttt                                                                           >  2:214263/1‑140 (MQ=255)
                                                            cGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTc                                                                          >  1:664674/1‑140 (MQ=255)
                                                            cGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTc                                                                          >  2:2182886/1‑140 (MQ=255)
                                                              tACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCa                                                                                  <  2:1275009/130‑1 (MQ=255)
                                                              tACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCa                                                                                  >  1:1275009/1‑130 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   <  1:868648/140‑1 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   >  1:98619/1‑140 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   >  1:1190060/1‑140 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   >  1:1513614/1‑140 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   >  1:781878/1‑140 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   >  2:592717/1‑140 (MQ=255)
                                                                   aCCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGCGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACg                                                                   >  2:1307528/1‑140 (MQ=255)
                                                                        aaCCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcg                                                              <  1:608024/140‑1 (MQ=255)
                                                                        aaCCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcg                                                              <  1:1403256/140‑1 (MQ=255)
                                                                        aaCCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcg                                                              <  2:56071/140‑1 (MQ=255)
                                                                        aaCCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcg                                                              <  2:882476/140‑1 (MQ=255)
                                                                        aaCCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcg                                                              <  2:645195/140‑1 (MQ=255)
                                                                          ccGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcgcg                                                            <  1:780639/140‑1 (MQ=255)
                                                                          ccGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTcgcg                                                            <  2:781878/140‑1 (MQ=255)
                                                                             gACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGcc                                                         >  2:1949251/1‑140 (MQ=255)
                                                                                  gTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCAt                                                    >  2:1400458/1‑140 (MQ=255)
                                                                                  gTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCAt                                                    <  1:1835286/140‑1 (MQ=255)
                                                                                  gTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCAt                                                    >  1:1082188/1‑140 (MQ=255)
                                                                                  gTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCAt                                                    >  1:590068/1‑140 (MQ=255)
                                                                                     aGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCtt                                                 >  1:122556/1‑140 (MQ=255)
                                                                                         aTAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGaa                                             <  2:647176/140‑1 (MQ=255)
                                                                                          tAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGaaa                                            <  2:664674/140‑1 (MQ=255)
                                                                                           aaCCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGaaaa                                           <  1:73816/140‑1 (MQ=255)
                                                                                             ccAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGTACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAata                                         <  1:1943616/140‑1 (MQ=255)
                                                                                               aGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATAtt                                       <  1:1825913/140‑1 (MQ=255)
                                                                                               aGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATAtt                                       <  2:666606/140‑1 (MQ=255)
                                                                                                        ttGTGCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAg                              <  1:1321559/140‑1 (MQ=255)
                                                                                                          gtgCTGCCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAgcg                            <  2:826809/140‑1 (MQ=255)
                                                                                                           tgctgcCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATCTTTAACGACAgcgc                           >  1:1663283/1‑140 (MQ=255)
                                                                                                           tgctgcCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAgcgc                           >  1:810397/1‑140 (MQ=255)
                                                                                                           tgctgcCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAgcgc                           >  1:1143475/1‑140 (MQ=255)
                                                                                                              tgcCACAGTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTg                        <  2:590068/140‑1 (MQ=255)
                                                                                                                     gTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGTAAATTg                 <  1:590463/140‑1 (MQ=255)
                                                                                                                     gTACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTg                 >  1:840147/1‑140 (MQ=255)
                                                                                                                      tACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTg                 >  1:149506/1‑139 (MQ=255)
                                                                                                                      tACTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTg                 <  2:149506/139‑1 (MQ=255)
                                                                                                                        cTTCATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTgcgg              <  1:245365/140‑1 (MQ=255)
                                                                                                                           cATCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGcggcgg           >  1:1931290/1‑140 (MQ=255)
                                                                                                                            aTCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCggg          >  1:1706040/1‑140 (MQ=255)
                                                                                                                             tCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGga         <  2:1290533/140‑1 (MQ=255)
                                                                                                                             tCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGga         <  2:1357622/140‑1 (MQ=255)
                                                                                                                             tCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGga         <  2:1415072/140‑1 (MQ=255)
                                                                                                                             tCGGTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGga         >  1:1357622/1‑140 (MQ=255)
                                                                                                                                gTAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGGagag      >  1:2156817/1‑140 (MQ=255)
                                                                                                                                 tAATGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGGAGAGt     <  2:292397/140‑1 (MQ=255)
                                                                                                                                   aTGCCAAGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGGAGAGTTg   >  1:370534/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                      
AACCACTAAAGGCCTGGGCGATAGTGTTATAGGCCGGAAGATTGGTGTACTCCTCGGTGCCGTACTGACCAAAACCGGACAGGTGAGCGATAACCAGTTTCGGGTTGTGCTGCCACAGTACTTCATCGGTAATGCCACGACGGGCAAAGGCCGGACCTTTACTGGCTTCGATGAAGATATCGGTGGTTTCCATTAATTTCAGAAACGCTTCGCGGCCTTCATCTTTGAAAATATTTAACGACAGCGCGTGCAAATTGCGGCGGGAGAGTTGC  >  NC_000913/38668‑38939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑