BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,182,494	C→A	S417Y (TCC→TAC)	rpoB →	RNA polymerase subunit beta

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,182,494	0	C	A	100.0%	423.3 / NA	119	S417Y (TCC→TAC)	rpoB	RNA polymerase subunit beta
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (52/67); total (52/67)

Only 100 of 119 total aligned reads displayed.

CCCTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTCCGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAAC  >  NC_000913/4182357‑4182630

cccTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACg                                                                                                                                        <  2:602487/140‑1 (MQ=255)

 ccTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACgg                                                                                                                                       >  2:1896573/1‑140 (MQ=255)

  cTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGt                                                                                                                                      <  2:1317888/140‑1 (MQ=255)

     gCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATc                                                                                                                                   >  2:92280/1‑140 (MQ=255)

     gCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATc                                                                                                                                   <  1:2097696/140‑1 (MQ=255)

     gCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATc                                                                                                                                   >  1:2083995/1‑140 (MQ=255)

      cGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATcc                                                                                                                                  <  2:1531444/140‑1 (MQ=255)

       gAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCt                                                                                                                                 <  2:2070394/140‑1 (MQ=255)

          ccgccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAg                                                                                                                              >  1:102453/1‑140 (MQ=255)

           cgccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGc                                                                                                                             >  2:201948/1‑140 (MQ=255)

           cgccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTCCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACg                                                                                                                                        >  1:1721277/1‑129 (MQ=255)

            gccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCa                                                                                                                            <  2:431130/140‑1 (MQ=255)

            gccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCa                                                                                                                            <  2:216010/140‑1 (MQ=255)

            gccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCa                                                                                                                            <  2:878700/140‑1 (MQ=255)

            gccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCa                                                                                                                            <  1:1840812/140‑1 (MQ=255)

             ccgACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCaa                                                                                                                           >  1:1048818/1‑140 (MQ=255)

               gACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCTTGAGCAAAg                                                                                                                         >  2:1888622/1‑140 (MQ=255)

                 cTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgac                                                                                                                       <  2:454121/140‑1 (MQ=255)

                 cTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgac                                                                                                                       <  2:2074711/140‑1 (MQ=255)

                   cGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacga                                                                                                                     <  1:1103060/140‑1 (MQ=255)

                   cGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacga                                                                                                                     <  2:1190329/140‑1 (MQ=255)

                   cGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacga                                                                                                                     <  1:1171812/140‑1 (MQ=255)

                    gTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacgac                                                                                                                    >  1:986370/1‑140 (MQ=255)

                    gTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacgac                                                                                                                    <  2:687830/140‑1 (MQ=255)

                    gTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacgac                                                                                                                    <  2:1251783/140‑1 (MQ=255)

                    gTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacgac                                                                                                                    <  1:2104700/140‑1 (MQ=255)

                    gTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGATCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAgacgac                                                                                                                    >  1:378590/1‑140 (MQ=255)

                         gcagcTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGAcatcat                                                                                                               <  1:623872/140‑1 (MQ=255)

                          cagcTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCAtt                                                                                                              <  1:1896573/140‑1 (MQ=255)

                           agcTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTg                                                                                                             <  2:439616/140‑1 (MQ=255)

                            gcTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGa                                                                                                            >  2:111256/1‑140 (MQ=255)

                            gcTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGa                                                                                                            >  2:786461/1‑140 (MQ=255)

                              tGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATg                                                                                                          >  2:1311827/1‑140 (MQ=255)

                               gAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGt                                                                                                         <  2:703582/140‑1 (MQ=255)

                               gAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGt                                                                                                         <  1:603283/140‑1 (MQ=255)

                                aaaGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGtt                                                                                                        <  2:452246/140‑1 (MQ=255)

                                    ccTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGa                                                                                                    >  2:1167246/1‑140 (MQ=255)

                                      tGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCAAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGaaa                                                                                                  <  1:1607610/140‑1 (MQ=255)

                                       gTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCAtt                                                                                                              >  1:517250/1‑127 (MQ=255)

                                       gTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGaaaa                                                                                                 <  1:1807457/140‑1 (MQ=255)

                                        ttCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGaaaaa                                                                                                <  2:1744883/140‑1 (MQ=255)

                                          cGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGc                                                                                              >  2:1844749/1‑140 (MQ=255)

                                             gaACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCa                                                                                           >  2:1442921/1‑140 (MQ=255)

                                                ccTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCg                                                                                        <  2:986370/140‑1 (MQ=255)

                                                  tGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGat                                                                                      <  2:183051/140‑1 (MQ=255)

                                                  tGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGat                                                                                      <  2:1982510/140‑1 (MQ=255)

                                                  tGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGat                                                                                      >  1:130883/1‑140 (MQ=255)

                                                        tctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGCAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGt                                                                                <  2:2193233/140‑1 (MQ=255)

                                                        tctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGTTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGt                                                                                <  2:1864954/140‑1 (MQ=255)

                                                        tctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGt                                                                                >  1:494553/1‑140 (MQ=255)

                                                        tctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGt                                                                                <  2:1000961/140‑1 (MQ=255)

                                                         ctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTa                                                                               >  2:571980/1‑140 (MQ=255)

                                                         ctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTa                                                                               >  1:498551/1‑140 (MQ=255)

                                                         ctcCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTa                                                                               >  2:896822/1‑140 (MQ=255)

                                                             gAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACgg                                                                           >  1:182393/1‑140 (MQ=255)

                                                                 aCCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTaaa                                                                       <  2:1048818/140‑1 (MQ=255)

                                                                   cGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAgg                                                                     >  1:1061880/1‑140 (MQ=255)

                                                                   cGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAACAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAAc                                                                             <  2:207374/132‑1 (MQ=255)

                                                                     ttATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCg                                                                   <  1:1302525/140‑1 (MQ=255)

                                                                     ttATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCg                                                                   >  2:1007234/1‑140 (MQ=255)

                                                                     ttATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCg                                                                   <  1:1630375/140‑1 (MQ=255)

                                                                     ttATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCg                                                                   <  2:1010788/140‑1 (MQ=255)

                                                                       aTGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGaa                                                                 <  2:1526483/140‑1 (MQ=255)

                                                                       aTGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGaa                                                                 <  1:201948/140‑1 (MQ=255)

                                                                       aTGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGaa                                                                 <  1:1442921/140‑1 (MQ=255)

                                                                       aTGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGaa                                                                 <  2:415722/140‑1 (MQ=255)

                                                                            ttGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCga                                                            <  1:1007234/140‑1 (MQ=255)

                                                                            ttGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCga                                                            <  1:758537/140‑1 (MQ=255)

                                                                            ttGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCga                                                            <  2:498551/140‑1 (MQ=255)

                                                                             tGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCg                                                                   >  1:528005/1‑132 (MQ=255)

                                                                             tGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCg                                                                   <  2:528005/132‑1 (MQ=255)

                                                                                        ggTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGacca                                                >  1:2177029/1‑140 (MQ=255)

                                                                                        ggTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGacca                                                >  1:712187/1‑140 (MQ=255)

                                                                                         gTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGaccac                                               >  2:1513167/1‑140 (MQ=255)

                                                                                         gTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGaccac                                               >  2:22746/1‑140 (MQ=255)

                                                                                         gTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGaccac                                               >  2:61419/1‑140 (MQ=255)

                                                                                              aTGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCgg                                          <  2:725631/140‑1 (MQ=255)

                                                                                              aTGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGATAAAGGCGAAGTCGATGATATCGACCACCTCgg                                          <  2:673615/140‑1 (MQ=255)

                                                                                                gAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCa                                        <  1:1167246/140‑1 (MQ=255)

                                                                                                 aaGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCaa                                       <  2:2083995/140‑1 (MQ=255)

                                                                                                 aaGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCaa                                       <  1:1479680/140‑1 (MQ=255)

                                                                                                 aaGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCaa                                       <  1:715288/140‑1 (MQ=255)

                                                                                                  aGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAAc                                      <  1:1019333/140‑1 (MQ=255)

                                                                                                    ttCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCa                                        <  2:1896160/136‑1 (MQ=255)

                                                                                                    ttCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCa                                        >  1:1896160/1‑136 (MQ=255)

                                                                                                    ttCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACcg                                    >  1:1073880/1‑140 (MQ=255)

                                                                                                    ttCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACcg                                    >  1:1870842/1‑140 (MQ=255)

                                                                                                    ttCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACcg                                    >  2:1174431/1‑140 (MQ=255)

                                                                                                    ttCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACcg                                    >  2:1310127/1‑140 (MQ=255)

                                                                                                     tCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACcgt                                   <  1:1134573/140‑1 (MQ=255)

                                                                                                              ctctGCTGCGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTAtccgt                          >  1:730984/1‑140 (MQ=255)

                                                                                                                  gctgcGCGAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTAtccgttccg                      <  2:730984/140‑1 (MQ=255)

                                                                                                                      cgcgAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTgg                  >  1:1889509/1‑140 (MQ=255)

                                                                                                                      cgcgAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTgg                  >  2:269237/1‑140 (MQ=255)

                                                                                                                      cgcgAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTgg                  >  2:1325525/1‑140 (MQ=255)

                                                                                                                        cgAAGAAATCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCg                >  2:110572/1‑140 (MQ=255)

                                                                                                                             aaaTCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATg           >  2:669054/1‑140 (MQ=255)

                                                                                                                              aaTCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATgg          <  1:1383024/140‑1 (MQ=255)

                                                                                                                                tCGAAGGTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCg        >  1:1199552/1‑140 (MQ=255)

                                                                                                                                      gTTACGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAAc  <  1:306701/140‑1 (MQ=255)

CCCTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTCCGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAAC  >  NC_000913/4182357‑4182630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`