| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,087,644 | G→A | A68V (GCT→GTT) | pgaC ← | poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,087,644 | 0 | G | A | 99.3% | 511.0 / ‑6.0 | 146 | A68V (GCT→GTT) | pgaC | poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaC |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (84/61); total (85/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTA > NC_000913/1087511‑1087780 | tCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGc > 2:1409141/1‑140 (MQ=255) aTTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGt > 1:1583881/1‑140 (MQ=255) aCGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTtc < 1:1857932/140‑1 (MQ=255) cAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGt < 1:165447/128‑1 (MQ=255) cAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGt > 2:165447/1‑128 (MQ=255) aaTAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTcccc < 2:992759/140‑1 (MQ=255) tAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCAc < 2:1830051/140‑1 (MQ=255) aTGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTg < 2:1333287/140‑1 (MQ=255) aTGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTg < 2:1121416/140‑1 (MQ=255) tGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTg > 1:1972080/1‑139 (MQ=255) gTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACTGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGc > 2:143583/1‑140 (MQ=255) gTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGc > 2:617746/1‑140 (MQ=255) gTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGc < 2:878117/140‑1 (MQ=255) ctcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGtt > 2:1464795/1‑140 (MQ=255) ctcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGtt < 1:2138096/140‑1 (MQ=255) ctcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGtt > 1:1961279/1‑140 (MQ=255) tcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTc > 1:1483527/1‑140 (MQ=255) aTAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTg < 1:953956/132‑1 (MQ=255) aCGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGAt < 1:999716/140‑1 (MQ=255) gCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAg > 1:392954/1‑140 (MQ=255) cTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGa < 2:1653567/140‑1 (MQ=255) cTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGa < 2:1583881/140‑1 (MQ=255) tgtgCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGAc > 2:270255/1‑140 (MQ=255) gtgCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGAcc < 2:1483527/140‑1 (MQ=255) tgCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGAt < 2:1070944/134‑1 (MQ=255) tgCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGAt > 1:1070944/1‑134 (MQ=255) tgCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGAccc > 2:1983803/1‑140 (MQ=255) gCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCa > 2:334863/1‑140 (MQ=255) gcgTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGAc > 1:799739/1‑140 (MQ=255) gcgTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGAc > 1:218715/1‑140 (MQ=255) gTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGGATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCcaac < 1:303672/140‑1 (MQ=255) gTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCcaac < 1:617746/140‑1 (MQ=255) tCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAAt < 1:56724/140‑1 (MQ=255) tCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAAt > 1:1647842/1‑140 (MQ=255) ccTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATc > 1:1390886/1‑140 (MQ=255) ccTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATc > 1:967125/1‑140 (MQ=255) ccTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATc > 2:2050252/1‑140 (MQ=255) ccTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATc > 2:936849/1‑140 (MQ=255) ccTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATc > 1:694308/1‑140 (MQ=255) cTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATcc < 1:1311643/140‑1 (MQ=255) tCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCca > 1:1334028/1‑140 (MQ=255) tCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCca > 2:1975460/1‑140 (MQ=255) aaCGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCcaca > 1:1343461/1‑140 (MQ=255) ttttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATg < 1:1734409/140‑1 (MQ=255) tttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATgg < 2:249124/140‑1 (MQ=255) tcctcATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACAt > 2:2098336/1‑140 (MQ=255) aTTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaa < 2:1935631/140‑1 (MQ=255) aaCAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGc < 2:531922/140‑1 (MQ=255) ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaa > 2:1383363/1‑130 (MQ=255) ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaa > 1:975128/1‑140 (MQ=255) ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaa > 1:1750363/1‑140 (MQ=255) ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaa > 2:2047814/1‑140 (MQ=255) ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaa < 1:1383442/140‑1 (MQ=255) gAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaag > 2:1714684/1‑140 (MQ=255) aaTGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaaga > 2:2087687/1‑140 (MQ=255) aaTGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaaga < 1:556771/140‑1 (MQ=255) aaTGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaaga > 1:1514831/1‑140 (MQ=255) gATAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGaaaa < 1:2047814/140‑1 (MQ=255) aTAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAAc > 2:2213052/1‑140 (MQ=255) tAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACg < 2:39687/140‑1 (MQ=255) tAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACg < 2:799739/140‑1 (MQ=255) tAATGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACg > 2:803862/1‑140 (MQ=255) aaTGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa < 1:446152/140‑1 (MQ=255) aaTGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa < 2:975128/140‑1 (MQ=255) aaTGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa < 1:1310865/140‑1 (MQ=255) aaTGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa < 1:1879656/140‑1 (MQ=255) tGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAAc < 2:1458378/140‑1 (MQ=255) tGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAAc > 2:1118793/1‑140 (MQ=255) tGGAGATAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAAc > 2:1613976/1‑140 (MQ=255) gagaTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCt > 1:1512388/1‑140 (MQ=255) gagaTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCt > 1:269960/1‑140 (MQ=255) gagaTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCt > 1:1007950/1‑140 (MQ=255) gaTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtca > 1:1650936/1‑140 (MQ=255) gaTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtca > 1:1996092/1‑140 (MQ=255) aTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa < 1:2210748/133‑1 (MQ=255) aTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa > 2:2210748/1‑133 (MQ=255) aTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcat > 1:2213715/1‑140 (MQ=255) aTAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcat > 1:796802/1‑140 (MQ=255) tAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatc > 1:1161944/1‑140 (MQ=255) tAGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatc > 1:332852/1‑140 (MQ=255) aGACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatca > 2:271631/1‑140 (MQ=255) gACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat < 1:2087687/140‑1 (MQ=255) gACGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat < 1:1719330/140‑1 (MQ=255) cGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa < 1:1482710/128‑1 (MQ=255) cGGATTATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcatca < 2:1519850/140‑1 (MQ=255) ttATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat > 1:1903265/1‑134 (MQ=255) ttATCTTTCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat < 2:1903265/134‑1 (MQ=255) cTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACCAACCTCATCAGCAGGTCACCa > 1:1005632/1‑140 (MQ=255) tCAACTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCagag < 2:1621747/140‑1 (MQ=255) aCTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGa > 2:1383033/1‑140 (MQ=255) cTGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGaa < 1:270255/140‑1 (MQ=255) tGGGGAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGaaa < 1:1593209/140‑1 (MQ=255) ggggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAg > 2:1486279/1‑140 (MQ=255) ggggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAg > 2:1866728/1‑140 (MQ=255) gggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt > 1:1461620/1‑140 (MQ=255) gggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt > 1:2015787/1‑140 (MQ=255) gggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt > 1:27270/1‑140 (MQ=255) gggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt > 2:132066/1‑140 (MQ=255) gggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt > 1:1034330/1‑140 (MQ=255) ggAACTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGta < 2:1390886/140‑1 (MQ=255) | GTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTA > NC_000913/1087511‑1087780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |