BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,404,886	C→G	A49G (GCG→GGG)	abgR →	putative LysR‑type DNA‑binding transcriptional regulator AbgR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,404,886	0	C	G	100.0%	395.3 / NA	105	A49G (GCG→GGG)	abgR	putative LysR‑type DNA‑binding transcriptional regulator AbgR
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (50/55); total (50/55)

Only 100 of 110 total aligned reads displayed.

TCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGG  >  NC_000913/1404749‑1405020

tCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGgggc                                                                                                                                      <  1:1925595/140‑1 (MQ=255)

    gTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAAct                                                                                                                                  >  1:114246/1‑140 (MQ=255)

            tcatcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTc                                                                                                                          <  1:525534/140‑1 (MQ=255)

             catcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCg                                                                                                                         <  1:1273745/140‑1 (MQ=255)

             catcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCg                                                                                                                         <  1:1927102/140‑1 (MQ=255)

              atcaAATTTGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCCCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGc                                                                                                                        <  1:735736/140‑1 (MQ=255)

              atcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGc                                                                                                                        <  2:150333/140‑1 (MQ=255)

              atcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGc                                                                                                                        <  1:776900/140‑1 (MQ=255)

              atcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGc                                                                                                                        <  2:545847/140‑1 (MQ=255)

              atcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGc                                                                                                                        <  1:1640331/140‑1 (MQ=255)

               tcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGcc                                                                                                                       <  1:1500194/140‑1 (MQ=255)

               tcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGGAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGcc                                                                                                                       >  2:1376437/1‑140 (MQ=255)

                caAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCg                                                                                                                      <  2:2125724/140‑1 (MQ=255)

                     tCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCgtagta                                                                                                                 <  1:853128/140‑1 (MQ=255)

                      cGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTaa                                                                                                                <  1:1804205/140‑1 (MQ=255)

                       gggCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTaaa                                                                                                               <  1:2140239/140‑1 (MQ=255)

                        ggCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAg                                                                                                              >  1:128603/1‑140 (MQ=255)

                          cTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGc                                                                                                            <  2:1628334/140‑1 (MQ=255)

                            tttGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGt                                                                                                          <  1:1147034/140‑1 (MQ=255)

                            tttGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGt                                                                                                          >  2:1975909/1‑140 (MQ=255)

                                ttgAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACg                                                                                                      <  2:1926388/140‑1 (MQ=255)

                                        gCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTTAAGGCGt                                                                                                          >  1:1802729/1‑128 (MQ=255)

                                        gCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTTAAGGCGt                                                                                                          <  2:1802729/128‑1 (MQ=255)

                                        gCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGa                                                                                              >  2:2058576/1‑140 (MQ=255)

                                        gCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGa                                                                                              >  1:1932382/1‑140 (MQ=255)

                                          tCGTCAGGGCAGCATTCGCGGAGCGAGCCGCATGGTGAATATCTCGCAACCGGCACTGAGTAAATTTATTCAGGAGCTAGAAGAAGAGGTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGGCCTTAAccggtg                                                                                            >  2:600274/1‑135 (MQ=255)

                                             tCAGGGCAGCAATCGCGGAGCGAGCCGAATGTTGAATAAGTCGCAACCGGCACTGAGTAAATCTATTCAAGAGCTAGAAGAAGGGTTAGCGGGGCCACTCTTTTTTCGCCGTAGTAAAGGCGGGACGTTTACCGATGCCg                                                                                         >  2:1683329/1‑140 (MQ=255)

                                                 ggCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGa                                                                                     >  1:1577721/1‑140 (MQ=255)

                                                 ggCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGa                                                                                     <  1:1928306/140‑1 (MQ=255)

                                                   cagcaTTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGaaa                                                                                   >  2:104346/1‑140 (MQ=255)

                                                   cagcaTTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGaaa                                                                                   >  2:840690/1‑140 (MQ=255)

                                                      caTTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGtt                                                                                >  1:1748875/1‑140 (MQ=255)

                                                      caTTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGtt                                                                                >  1:939869/1‑140 (MQ=255)

                                                         tCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGttttt                                                                             <  2:939869/140‑1 (MQ=255)

                                                             ggAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCa                                                                         <  1:2108215/140‑1 (MQ=255)

                                                                gcgagcCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCa                                                                      <  2:1577721/140‑1 (MQ=255)

                                                                   agcCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGc                                                                   <  2:450268/140‑1 (MQ=255)

                                                                         aTGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGttttt                                                                             >  1:1422774/1‑124 (MQ=255)

                                                                         aTGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCt                                                             <  1:662897/140‑1 (MQ=255)

                                                                           gTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTaa                                                           <  1:132393/140‑1 (MQ=255)

                                                                           gTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTaa                                                           <  1:982582/140‑1 (MQ=255)

                                                                           gTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGATAGAAGAAGGGTTAGCGGGGCACCTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTaa                                                           <  2:245714/140‑1 (MQ=255)

                                                                            ttGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAAt                                                          <  1:1975909/140‑1 (MQ=255)

                                                                              gAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTc                                                        <  1:1329268/140‑1 (MQ=255)

                                                                                   tGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGaa                                                   <  2:698206/140‑1 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAGCTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGt                                                               <  2:431115/127‑1 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTTTCACCCGGCCGGCTTATTTCTTGaaa                                                  >  1:2103955/1‑139 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGc                                                                   <  1:328954/123‑1 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGc                                                                   >  2:328954/1‑123 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGt                                                               >  1:431115/1‑127 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAag                                                  >  2:1792662/1‑140 (MQ=255)

                                                                                    gTCGCAACCGGCACTGAGAAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAag                                                  >  1:311333/1‑140 (MQ=255)

                                                                                      cGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAagag                                                >  2:356316/1‑140 (MQ=255)

                                                                                      cGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAagag                                                >  1:1211593/1‑140 (MQ=255)

                                                                                      cGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAagag                                                >  2:440836/1‑140 (MQ=255)

                                                                                      cGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAagag                                                >  2:1234150/1‑140 (MQ=255)

                                                                                      cGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAagag                                                >  2:215450/1‑140 (MQ=255)

                                                                                      cGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAagag                                                >  2:2077246/1‑140 (MQ=255)

                                                                                         aaCCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGaa                                                   <  2:975032/134‑1 (MQ=255)

                                                                                         aaCCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGaa                                                   >  1:975032/1‑134 (MQ=255)

                                                                                             ggCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg                                         <  1:638760/140‑1 (MQ=255)

                                                                                             ggCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg                                         <  2:304195/140‑1 (MQ=255)

                                                                                             ggCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg                                         <  2:1932382/140‑1 (MQ=255)

                                                                                                aCTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAg                                      <  2:170107/140‑1 (MQ=255)

                                                                                                aCTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAg                                      <  1:2058576/140‑1 (MQ=255)

                                                                                                aCTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCACGCAg                                      <  2:128603/140‑1 (MQ=255)

                                                                                                  tGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGcc                                    <  2:239103/140‑1 (MQ=255)

                                                                                                  tGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGcc                                    <  1:1992783/140‑1 (MQ=255)

                                                                                                    aGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCa                                  >  1:1538770/1‑140 (MQ=255)

                                                                                                     gTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcgc                                        >  1:415728/1‑133 (MQ=255)

                                                                                                     gTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcgc                                        <  2:415728/133‑1 (MQ=255)

                                                                                                      tAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAag                                <  2:1748875/140‑1 (MQ=255)

                                                                                                             aTTCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGatat                         <  1:2204283/140‑1 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAag                                <  1:802120/132‑1 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAag                                >  2:802120/1‑132 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  1:257919/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  1:1547118/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  2:762387/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  1:1329848/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  2:1309899/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  2:132390/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  1:849385/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  2:1514512/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  2:1923122/1‑140 (MQ=255)

                                                                                                              ttCAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATAtt                        >  1:647255/1‑140 (MQ=255)

                                                                                                                cAGGAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCg                      >  2:776768/1‑140 (MQ=255)

                                                                                                                  ggAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGcc                    <  1:215450/140‑1 (MQ=255)

                                                                                                                   gAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGcc                    >  1:923132/1‑139 (MQ=255)

                                                                                                                   gAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGcc                    <  2:923132/139‑1 (MQ=255)

                                                                                                                   gAGCTAGAAGAAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCa                   >  2:176769/1‑140 (MQ=255)

                                                                                                                   gAGCTAGAAGAAGAGCCAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCa                   >  2:1585844/1‑140 (MQ=255)

                                                                                                                        agaagaAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCTAAGAGGATATTCGCCAACGAc              >  1:1243851/1‑140 (MQ=255)

                                                                                                                        agaagaAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGAc              <  1:347342/140‑1 (MQ=255)

                                                                                                                        agaagaAGGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGAc              >  2:1048750/1‑140 (MQ=255)

                                                                                                                            gaagGGTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAgg          >  1:884664/1‑140 (MQ=255)

                                                                                                                               gggTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCa       >  2:910532/1‑140 (MQ=255)

                                                                                                                               gggTTAGCGGGGCAACTCTTTTCTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCa       <  2:1244297/140‑1 (MQ=255)

                                                                                                                                 gTTAGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAAc     >  2:1571534/1‑140 (MQ=255)

                                                                                                                                    aGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTgg  >  1:1832617/1‑140 (MQ=255)

                                                                                                                                    aGCGGGGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTgg  >  1:1186299/1‑140 (MQ=255)

TCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGG  >  NC_000913/1404749‑1405020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`