BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	550,189	C→A	A188E (GCG→GAG)	ylbF →	DUF2877 domain‑containing protein YlbF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	550,189	0	C	A	100.0%	353.9 / NA	100	A188E (GCG→GAG)	ylbF	DUF2877 domain‑containing protein YlbF
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (44/56); total (44/56)

Only 100 of 104 total aligned reads displayed.

TGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCT  >  NC_000913/550053‑550319

tGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATgagcg                                                                                                                                 >  1:2008011/1‑140 (MQ=255)

tGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATgagcg                                                                                                                                 >  2:397794/1‑140 (MQ=255)

 gTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATgagcgc                                                                                                                                >  2:2303044/1‑140 (MQ=255)

  ttttCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCt                                                                                                                               >  2:1977119/1‑140 (MQ=255)

           agcgcTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGgtcgtc                                                                                                                      >  2:1033083/2‑140 (MQ=255)

            gcgcTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGGGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTcc                                                                                                                     >  2:1223040/1‑140 (MQ=255)

            gcgcTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTcc                                                                                                                     >  1:294482/1‑140 (MQ=255)

             cgcTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCg                                                                                                                    >  2:1345468/1‑140 (MQ=255)

             cgcTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCT‑GTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGt                                                                                                                   >  1:1534758/1‑140 (MQ=255)

                      gCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGcc                                                                                                           <  2:294482/140‑1 (MQ=255)

                            aGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGCATTATGGCGCTTTAGATGACCGCTCCGGTCGTCCGTTTTTTGCCTGTTcc                                                                                                     >  2:512958/1‑140 (MQ=255)

                              aCCGCCTGGCGGCGCTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGa                                                                                                   <  1:229795/140‑1 (MQ=255)

                              aCCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGa                                                                                                   >  2:2362321/1‑140 (MQ=255)

                              aCCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGa                                                                                                   <  1:1749121/140‑1 (MQ=255)

                              aCCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATACTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGa                                                                                                   <  1:574088/140‑1 (MQ=255)

                               ccGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGAc                                                                                                  <  1:221983/140‑1 (MQ=255)

                                 gACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGAc                                                                                                  <  1:1469454/138‑1 (MQ=255)

                                 gACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGAc                                                                                                  >  2:1469454/1‑138 (MQ=255)

                                  aCTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAAt                                                                                               >  1:497075/1‑140 (MQ=255)

                                  aCTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAAt                                                                                               >  1:1605964/1‑140 (MQ=255)

                                      gcggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGc                                                                                           <  1:2227422/140‑1 (MQ=255)

                                      gcggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGc                                                                                           <  1:2303044/140‑1 (MQ=255)

                                      gcggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGc                                                                                           <  2:1904302/140‑1 (MQ=255)

                                      gcggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGc                                                                                           >  1:1312481/1‑140 (MQ=255)

                                        ggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa                                                                                         <  1:2362321/140‑1 (MQ=255)

                                        ggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa                                                                                         <  1:1049352/140‑1 (MQ=255)

                                          cACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACt                                                                                       <  2:39463/140‑1 (MQ=255)

                                             tggctggGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGt                                                                                    <  1:364752/140‑1 (MQ=255)

                                             tggctggGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGt                                                                                    <  2:301597/140‑1 (MQ=255)

                                             tggctggGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGt                                                                                    <  1:702053/140‑1 (MQ=255)

                                                ctggGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTAc                                                                                 <  1:1062172/140‑1 (MQ=255)

                                                    gTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACcaca                                                                             >  2:51604/1‑140 (MQ=255)

                                                         ggCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGt                                                                        >  2:1229293/1‑140 (MQ=255)

                                                         ggCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGt                                                                        <  1:397794/140‑1 (MQ=255)

                                                         ggCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGt                                                                        >  2:435667/1‑140 (MQ=255)

                                                         ggCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGt                                                                        >  2:516526/1‑140 (MQ=255)

                                                          gCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTg                                                                       <  1:1223040/140‑1 (MQ=255)

                                                            cccGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAg                                                                     <  1:1977119/140‑1 (MQ=255)

                                                             ccGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGc                                                                    >  2:1154821/1‑140 (MQ=255)

                                                               ggATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGt                                                                  <  1:1736965/140‑1 (MQ=255)

                                                               ggATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGt                                                                  <  2:497075/140‑1 (MQ=255)

                                                                gATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTc                                                                 <  2:1923465/140‑1 (MQ=255)

                                                                 aTTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCa                                                                <  2:1526530/140‑1 (MQ=255)

                                                                 aTTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTAAGCGTCa                                                                <  1:1229293/140‑1 (MQ=255)

                                                                 aTTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCATCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCa                                                                <  2:1923349/140‑1 (MQ=255)

                                                                 aTTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCT‑GTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAg                                                               <  2:1534758/140‑1 (MQ=255)

                                                                  ttAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAg                                                               <  1:430207/140‑1 (MQ=255)

                                                                  ttAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAg                                                               <  1:1345468/140‑1 (MQ=255)

                                                                    aaCGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCg                                                                          >  2:15896/1‑127 (MQ=255)

                                                                    aaCGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCg                                                                          <  1:15896/127‑1 (MQ=255)

                                                                    aaCGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGtt                                                             >  1:190487/1‑140 (MQ=255)

                                                                     aCGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTg                                                                       >  1:744133/1‑129 (MQ=255)

                                                                     aCGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTg                                                                       <  2:744133/129‑1 (MQ=255)

                                                                     aCGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTa                                                            >  1:346650/1‑140 (MQ=255)

                                                                        ccGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTAttt                                                         <  1:966650/140‑1 (MQ=255)

                                                                          gAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTAc                                                       >  1:539838/1‑140 (MQ=255)

                                                                           aGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACg                                                      >  1:1013917/1‑140 (MQ=255)

                                                                           aGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACg                                                      >  2:1337014/1‑140 (MQ=255)

                                                                           aGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACg                                                      >  1:1907298/1‑140 (MQ=255)

                                                                           aGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAACCTGCAACTCGTTACCACAGCGGTGAGCGTc                                                                 <  1:470654/129‑1 (MQ=255)

                                                                           aGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCACCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTc                                                                 >  2:470654/1‑129 (MQ=255)

                                                                                 gatgaCACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGc                                                <  2:1340892/140‑1 (MQ=255)

                                                                                     acacGCTGAGCGGAATGCTGCTGGCGACCTGGTATTATGGCGCTTTAGATGACCGCTCCGGTCCTCCGTTTTTTGCAGATTCCGACTATCTGCAACTTGTTACCACAGCGGTGAGCGTCAGTTATTTGCGTTATGCcgcg                                            <  2:1618135/140‑1 (MQ=255)

                                                                                      cacGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCgcgc                                           <  1:51604/140‑1 (MQ=255)

                                                                                         gCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAg                                        <  1:869504/140‑1 (MQ=255)

                                                                                         gCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAg                                        >  1:49262/1‑140 (MQ=255)

                                                                                         gCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAg                                        >  1:272067/1‑140 (MQ=255)

                                                                                           tGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGATCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGa                                      >  2:607733/1‑140 (MQ=255)

                                                                                             aGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGata                                    >  2:1134613/1‑140 (MQ=255)

                                                                                                   aTGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgc                              <  1:785853/140‑1 (MQ=255)

                                                                                                   aTGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgc                              <  1:1347720/140‑1 (MQ=255)

                                                                                                       tgctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcg                          >  1:238181/1‑140 (MQ=255)

                                                                                                        gctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                         <  1:1501011/140‑1 (MQ=255)

                                                                                                        gctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                         <  2:238181/140‑1 (MQ=255)

                                                                                                        gctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                         <  2:1825891/140‑1 (MQ=255)

                                                                                                        gctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                         <  1:1304109/140‑1 (MQ=255)

                                                                                                        gctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                         <  1:33291/140‑1 (MQ=255)

                                                                                                         ctgGCGGCCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgcc                        >  2:2079736/1‑140 (MQ=255)

                                                                                                            gcggcCTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACt                     >  1:162340/1‑140 (MQ=255)

                                                                                                                ccTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTg                 >  2:806112/1‑140 (MQ=255)

                                                                                                                ccTGGTATTATGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTg                 <  1:1134613/140‑1 (MQ=255)

                                                                                                                     tattatGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACtt            >  1:166729/1‑140 (MQ=255)

                                                                                                                         atGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGtt        <  2:1013917/140‑1 (MQ=255)

                                                                                                                         atGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGtt        <  1:1695023/140‑1 (MQ=255)

                                                                                                                         atGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGtt        <  1:21079/140‑1 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  2:1312481/140‑1 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  1:1033083/140‑1 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  1:1154821/140‑1 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       >  1:1527651/1‑140 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       >  1:2081156/1‑140 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  2:346650/140‑1 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  2:1132880/140‑1 (MQ=255)

                                                                                                                          tGGCGCTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  2:2008011/140‑1 (MQ=255)

                                                                                                                          gggCGCTTTAGATGAGCGCTCCGGTCGTCTGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc       <  1:408413/139‑1 (MQ=255)

                                                                                                                              gcTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGc   >  1:958698/1‑140 (MQ=255)

                                                                                                                               cTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGct  >  2:420372/1‑140 (MQ=255)

                                                                                                                               cTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGct  >  1:260884/1‑140 (MQ=255)

                                                                                                                               cTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGct  >  1:1652165/1‑140 (MQ=255)

                                                                                                                               cTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGct  >  1:1305900/1‑140 (MQ=255)

                                                                                                                               cTTTAGATGAGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGct  >  2:106707/1‑140 (MQ=255)

TGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCT  >  NC_000913/550053‑550319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`