BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	871,543	C→A	R193S (CGC→AGC)	gsiC →	glutathione ABC transporter membrane subunit GsiC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	871,543	0	C	A	100.0%	459.8 / NA	127	R193S (CGC→AGC)	gsiC	glutathione ABC transporter membrane subunit GsiC
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (65/62); total (65/62)

Only 100 of 131 total aligned reads displayed.

GGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTA  >  NC_000913/871407‑871677

ggggATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCagcg                                                                                                                                     >  2:1213466/1‑140 (MQ=255)

  ggATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCagcgcg                                                                                                                                   <  2:731886/140‑1 (MQ=255)

      gCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGcgtcgt                                                                                                                               >  1:454963/1‑140 (MQ=255)

      gCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGcgtcgt                                                                                                                               >  2:2132739/1‑140 (MQ=255)

            aaTTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCg                                                                                                                         <  1:1213466/140‑1 (MQ=255)

              ttCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGAt                                                                                                                       <  2:454963/140‑1 (MQ=255)

                 aGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGtt                                                                                                                    <  2:1404502/140‑1 (MQ=255)

                  ggTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGttt                                                                                                                   >  2:84445/1‑140 (MQ=255)

                   gTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGtttt                                                                                                                  >  2:1031908/1‑140 (MQ=255)

                   gTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCATTACCAGCGCGACGTTTGTCGATGtttt                                                                                                                  >  2:332866/1‑140 (MQ=255)

                    tATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTa                                                                                                                 <  2:632495/140‑1 (MQ=255)

                        ttcCGTTCACCTGGGCTGGTCTCCTACCGTGCAGGAAGAAAGTAGGCAGTTATCAATTTTCCCCTCCCTGCCGCTCGGCGAGTCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             <  2:830772/139‑1 (MQ=255)

                        ctcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             <  1:2194053/140‑1 (MQ=255)

                        ctcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             >  1:216785/1‑140 (MQ=255)

                        ctcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             <  1:1166889/140‑1 (MQ=255)

                        ctcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             <  1:47433/140‑1 (MQ=255)

                        ctcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             <  1:1887700/140‑1 (MQ=255)

                         tcCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGa                                                                                                            <  1:2008764/140‑1 (MQ=255)

                           cGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAg                                                                                                               <  2:262004/135‑1 (MQ=255)

                           cGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAg                                                                                                          >  1:2149053/1‑140 (MQ=255)

                            gTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             <  2:520839/136‑1 (MQ=255)

                            gTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             >  1:520839/1‑136 (MQ=255)

                             ttGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGAt                                                                                                        >  1:2131194/1‑140 (MQ=255)

                             ttGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGAt                                                                                                        >  1:245345/1‑140 (MQ=255)

                             ttGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGAt                                                                                                        <  1:410765/140‑1 (MQ=255)

                                aaCTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                                             >  1:1573395/1‑132 (MQ=255)

                                aaCTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATtat                                                                                                     >  2:198203/1‑140 (MQ=255)

                                aaCTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATtat                                                                                                     >  2:2070185/1‑140 (MQ=255)

                                     ggctggctGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCg                                                                                                >  1:1086945/1‑140 (MQ=255)

                                     ggctggctGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCg                                                                                                >  1:924312/1‑140 (MQ=255)

                                       ctggctgCCTACCGTGGGAGCAGACAGTTGGC‑GCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTAc                                                                                             >  2:1460573/1‑140 (MQ=255)

                                          gctgCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACcg                                                                                           >  2:1039890/1‑140 (MQ=255)

                                          gctgCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACcg                                                                                           >  1:2071263/1‑140 (MQ=255)

                                               cTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAgg                                                                                      >  2:456259/1‑140 (MQ=255)

                                                tACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAggg                                                                                     >  1:1185541/1‑140 (MQ=255)

                                                    gTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGaa                                                                                 <  2:216785/140‑1 (MQ=255)

                                                     tGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGaaa                                                                                <  2:1361717/140‑1 (MQ=255)

                                                        gAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAggg                                                                             <  2:2071263/140‑1 (MQ=255)

                                                        gAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAggg                                                                             >  1:359620/1‑140 (MQ=255)

                                                         aGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAgggg                                                                            >  1:1790608/1‑140 (MQ=255)

                                                            aGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAgggg                                                                            >  1:316642/1‑137 (MQ=255)

                                                            aGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAgggg                                                                            <  2:316642/137‑1 (MQ=255)

                                                             gACAGTTGGCAGCATTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAg                                                                        >  1:1336677/1‑140 (MQ=255)

                                                                   tGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAAc                                                                  <  1:77967/140‑1 (MQ=255)

                                                                      cagcaCTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGc                                                                       <  2:1491491/132‑1 (MQ=255)

                                                                      cagcaCTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGc                                                                       >  1:1491491/1‑132 (MQ=255)

                                                                       agcaCTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTgg                                                              >  1:1392335/1‑140 (MQ=255)

                                                                       agcaCTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTgg                                                              >  2:106820/1‑140 (MQ=255)

                                                                            tACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGt                                                         >  2:1111482/1‑140 (MQ=255)

                                                                            tACATTTTACCCCCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCAATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTggg                                                             <  2:159774/136‑1 (MQ=255)

                                                                               aTTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCt                                                      <  1:2036948/140‑1 (MQ=255)

                                                                                   tACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCaaa                                                  >  2:240638/1‑140 (MQ=255)

                                                                                   tACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCaaa                                                  >  2:735252/1‑140 (MQ=255)

                                                                                   tACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCaaa                                                  >  2:1769303/1‑140 (MQ=255)

                                                                                   tACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCaaa                                                  >  1:344062/1‑140 (MQ=255)

                                                                                      cctccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAacac                                               >  2:852401/1‑140 (MQ=255)

                                                                                        tccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGCAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACgg                                             >  2:1578940/1‑140 (MQ=255)

                                                                                        tccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACgg                                             <  1:173422/140‑1 (MQ=255)

                                                                                        tccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACgg                                             >  2:2221661/1‑140 (MQ=255)

                                                                                        tccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACgg                                             >  1:67577/1‑140 (MQ=255)

                                                                                        tccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACgg                                             >  2:398960/1‑140 (MQ=255)

                                                                                         ccctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACggg                                            >  2:1892395/1‑140 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGGGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGc                                           >  2:1817607/1‑140 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAaca                                                <  1:2183372/135‑1 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAaca                                                >  2:2183372/1‑135 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAac                                                 <  1:891906/134‑1 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACggg                                            >  1:183267/1‑139 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACggg                                            <  2:183267/139‑1 (MQ=255)

                                                                                          cctGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGc                                           >  2:1129822/1‑140 (MQ=255)

                                                                                             gACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTAc                                        >  1:900524/1‑140 (MQ=255)

                                                                                              aCGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACg                                       <  2:1117643/140‑1 (MQ=255)

                                                                                                   cGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcg                                  >  2:958458/1‑140 (MQ=255)

                                                                                                    ggCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAaca                                                >  2:1896658/1‑125 (MQ=255)

                                                                                                    ggCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgc                                 >  2:2104752/1‑140 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  2:924312/140‑1 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  2:2149053/140‑1 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  1:332866/140‑1 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  1:1111482/140‑1 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  1:1039890/140‑1 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  2:1449176/140‑1 (MQ=255)

                                                                                                     gcgcGGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAAcgcg                                <  1:2104752/140‑1 (MQ=255)

                                                                                                      cgcgGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCga                               >  2:1353671/1‑140 (MQ=255)

                                                                                                       gcgGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat                              <  1:1894406/140‑1 (MQ=255)

                                                                                                       gcgGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat                              <  2:347157/140‑1 (MQ=255)

                                                                                                       gcgGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat                              <  1:1892395/140‑1 (MQ=255)

                                                                                                       gcgGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat                              <  2:245345/140‑1 (MQ=255)

                                                                                                       gcgGCAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat                              <  2:2186471/140‑1 (MQ=255)

                                                                                                           cAGTGGCCGCCGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATc                          <  1:1951407/140‑1 (MQ=255)

                                                                                                                gccgccGTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGt                     <  2:900524/140‑1 (MQ=255)

                                                                                                                 ccgccgTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTa                    <  1:398960/140‑1 (MQ=255)

                                                                                                                 ccgccgTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTa                    <  2:1593818/140‑1 (MQ=255)

                                                                                                                     cgTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGa                <  1:456259/140‑1 (MQ=255)

                                                                                                                      gTGATGGCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGAc               <  1:1173954/140‑1 (MQ=255)

                                                                                                                           ggCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGGGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCatga          <  1:1817607/140‑1 (MQ=255)

                                                                                                                           ggCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCatga          <  1:1578940/140‑1 (MQ=255)

                                                                                                                           ggCGCGCTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCatga          <  2:2037634/140‑1 (MQ=255)

                                                                                                                                 cTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCTGGTAGTGACCATGATGGGCt    <  1:1353671/140‑1 (MQ=255)

                                                                                                                                 cTTTACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCt    >  1:2290420/1‑140 (MQ=255)

                                                                                                                                   ttACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTa  <  1:230203/140‑1 (MQ=255)

                                                                                                                                   ttACCAGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTa  <  1:545717/140‑1 (MQ=255)

GGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTA  >  NC_000913/871407‑871677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`