| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 445,558 | 0 | A | C | 23.8% | 142.4 / 15.1 | 64 | V370G (GTA→GGA) | yajR | putative major facilitator superfamily transport protein YajR |
| Reads supporting (aligned to +/- strand): ref base A (31/17); new base C (0/15); total (31/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.09e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TAGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGA > NC_000913/445419‑445694 | tAGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATa > 1:706803/1‑140 (MQ=255) aGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATAc > 1:207847/1‑140 (MQ=255) aaaCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATAcccc < 2:732981/140‑1 (MQ=255) aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCt < 2:474976/140‑1 (MQ=255) aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTAC‑CGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTg > 2:1669193/1‑140 (MQ=255) cGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATTCCCCCTg < 1:364074/140‑1 (MQ=255) gCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGa < 1:320594/140‑1 (MQ=255) aCTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGGCTGTTAGCCACACTCCGGCCAGCATTTCGCCACC‑GGGAAATACCCCCCGAcc > 2:561384/1‑140 (MQ=255) cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACa < 2:10332/140‑1 (MQ=255) cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACa < 1:204008/140‑1 (MQ=255) gCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGTGACTGTCAGCCACACTGCGGACAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACAt < 2:1074183/140‑1 (MQ=255) gCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACAt < 2:1731480/140‑1 (MQ=255) gTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGC‑GAGAAATACCCCCTGACCGT‑CAAAAATGCCGt > 1:696757/1‑140 (MQ=255) ttCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGCCTGTCAGCCACCCTGCGGCCAGCATTGCGCCAGG‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAgccgcc < 1:1199601/140‑1 (MQ=255) gATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGC‑GAGAAATACCCCCCGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAAc > 2:1284077/1‑140 (MQ=255) cgcAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTTCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATcgc > 2:958613/1‑140 (MQ=255) cgcAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATcgc < 1:1284077/140‑1 (MQ=255) ctgctgACATACGGCGGTTTTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATcgccacgcc < 2:207847/140‑1 (MQ=255) ctgctgACATACGGCGGTTTTTTAAGGGTACTGGCGCCTGTCAGCCACCCGGCGGCCAGCATTGCGCCAGG‑GAAAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATcgccacgcc < 2:2187995/140‑1 (MQ=255) gctgACATACGGCGGTTTTTTTATGGGACTGGCGACTGTCAGCCACACTGCGGCCAGCATTTCGCCCGC‑GAGAAAAAACCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAACCCCCCAGCGAACCCCCAATCGCCACCCCaa > 2:1238373/1‑140 (MQ=255) ctgACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAg > 1:1532723/1‑140 (MQ=255) aCATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGaaa < 1:2264889/140‑1 (MQ=255) cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc > 1:1332770/1‑140 (MQ=255) cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc < 1:958613/140‑1 (MQ=255) ttCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTGCGCCAGC‑GAGAAATACCCCCCGACCGG‑CAAACAAGCCGTTAA‑TCCCGCCGCCCCGCGAAACGCCCATCGCCACCCCCAGAAACTGGCtggggg > 2:343806/1‑140 (MQ=255) ttCTTTCAGGGTACGGGCGCCTGTCGCCCACACGGCGGCCAGCTTTGCGCCAGC‑GAGAAATCCCCCCGGCCCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCtggtgg < 2:417503/140‑1 (MQ=255) tCTTTTATGGGACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAACCGCCCCGCGAACCGCCAATCGCCACGCCAAGAAAATGGCtgggggg > 2:1569420/1‑139 (MQ=255) tCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCCT‑CCAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCCCCCATCGCCACGCCCAGAAAATGGCtgggggg > 2:194720/1‑139 (MQ=255) cATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTaaa < 1:291084/140‑1 (MQ=255) aTGGTACTGGCGACTGGCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCCATCGCCACGCCAAGAAACTGGCTGGTGGAGGaaaa > 2:1504167/1‑139 (MQ=255) gTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAcc > 2:1850863/1‑140 (MQ=255) gTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGCGGCGGAAACAcc > 2:1797299/1‑140 (MQ=255) tACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 1:1658819/140‑1 (MQ=255) tACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 1:343806/140‑1 (MQ=255) tACTGGCGACTGCCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAAAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 2:1216917/140‑1 (MQ=255) cgggCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGG‑GAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt < 2:2275904/138‑1 (MQ=255) cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt > 1:1453671/1‑140 (MQ=255) cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt > 1:1922244/1‑140 (MQ=255) ggCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCGGC‑GAGAAATACCCCCTGCCCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCAAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCg < 2:2202755/140‑1 (MQ=255) gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc > 2:219202/1‑140 (MQ=255) gccTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCg < 1:561384/138‑1 (MQ=255) gACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCg < 1:1669193/140‑1 (MQ=255) gACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCg < 1:1535855/140‑1 (MQ=255) aCTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGt > 2:214054/1‑140 (MQ=255) aCTGTCAGCCACACTGCGGCCACCATTGCCCCAGC‑GAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGt < 1:1569420/140‑1 (MQ=255) ctgccggCCACACTGCGGCCAGCATTGCGCCAGC‑GAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa < 2:1332770/134‑1 (MQ=255) cTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa < 1:1497752/140‑1 (MQ=255) cTGTCAGCCACACGGCGGCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGC‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa < 2:93438/140‑1 (MQ=255) tGTCAGCCATACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 1:1677536/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGt < 1:1276845/138‑1 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGt > 2:1276845/1‑138 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 2:913214/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 1:2326283/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 2:950861/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAACCATCGCCGTAc > 2:1175589/1‑140 (MQ=255) tCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCt > 1:1160500/1‑140 (MQ=255) aGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCA‑CGCCGTACCTTTg > 1:587731/1‑140 (MQ=255) gCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTg > 2:295253/1‑140 (MQ=255) cacaCTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTa < 2:1922244/140‑1 (MQ=255) cacTGCGCCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑AAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAAc < 2:452783/140‑1 (MQ=255) tGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa > 2:2248629/1‑127 (MQ=255) tGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa < 1:2248629/127‑1 (MQ=255) tGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctg > 2:2148416/1‑140 (MQ=255) cGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgct > 1:452783/1‑140 (MQ=255) gCCAGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg < 2:694402/140‑1 (MQ=255) gCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg > 2:209804/1‑140 (MQ=255) gCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg > 2:2106166/1‑140 (MQ=255) gCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg > 2:800060/1‑140 (MQ=255) cAGCTTTGCGCAAGC‑AAAAAATCCCCCCCG‑CCGTACAAAAAGGCCTTTAA‑CCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCg < 2:1136865/140‑1 (MQ=255) aGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 1:2106166/140‑1 (MQ=255) aGCATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑AAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 1:194720/140‑1 (MQ=255) aGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 1:1798785/140‑1 (MQ=255) aGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 1:800060/140‑1 (MQ=255) aGCATTGCGCCAGC‑GAAAAATCCCCCCTGACCGT‑AAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCGGGGGGGGGGGGCGGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 1:1850863/140‑1 (MQ=255) gCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAc > 1:2294448/1‑140 (MQ=255) cATTGCGCCGGC‑GAAAAATCCCCCCTGCCCGT‑AAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct < 1:2302391/140‑1 (MQ=255) cATTGCGCCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct < 1:696800/140‑1 (MQ=255) cATTGCGCCAGC‑GAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct < 2:1532723/140‑1 (MQ=255) aTTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TTCAGCCGCCCAGCGAACCACCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActc > 2:1994023/1‑140 (MQ=255) ttGCGCCAGG‑GAGAAATACCCCCTGACCGT‑AAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct < 1:549871/140‑1 (MQ=255) tggcgcCAGC‑GAAAAATCCCCCCGGCCCGA‑AAAACATGCCGTTAA‑CCCACCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct < 2:596184/138‑1 (MQ=255) gcgcCAGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt < 1:634603/140‑1 (MQ=255) gcgcCAGC‑GAGAAATCCCCCCGGCCCTT‑AAAACACGCCGTTAA‑TCCAGCCCCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt < 2:2326283/140‑1 (MQ=255) ccgcCAGCAGAAAACTCCCCCCAGCCCAC‑CAAAC‑TGGCGTTAATTCCAGCCCCCCCGAAAACCGCCACTCGCCACGCCAAGAAACGGCCTGGTGGAGTAAACACCCA‑CGCCGTACCTTTGTAACCTGCTGGCGACTCttt < 2:587731/139‑1 (MQ=255) cgcCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGCGTAAACACCCATCGCCGTATCCTTTTAACCTGCTGGCGGCTCTTTa > 2:1587714/1‑140 (MQ=255) cAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTg > 2:2113131/1‑140 (MQ=255) aGC‑GAGAAATCCCCCCTGCCCGT‑AAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGa < 2:2154996/140‑1 (MQ=255) aGC‑GAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGa < 1:1238373/140‑1 (MQ=255) gC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGAt > 1:1656471/1‑140 (MQ=255) gC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGAt > 2:82221/1‑140 (MQ=255) aaTCCCCCCTGACCGT‑CAATAATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGa < 1:1647831/140‑1 (MQ=255) aaTACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGa < 1:2113131/140‑1 (MQ=255) | TAGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGC‑GAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAA‑TCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGA > NC_000913/445419‑445694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |