BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,012,471	G→T	intergenic (+78/+143)	yqeA → / ← yqeB	putative amino acid kinase YqeA/XdhC‑CoxI family protein YqeB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,012,471	0	G	T	100.0%	534.9 / NA	149	intergenic (+78/+143)	yqeA/yqeB	putative amino acid kinase YqeA/XdhC‑CoxI family protein YqeB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (71/78); total (71/78)

Only 100 of 149 total aligned reads displayed.

TATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGC  >  NC_000913/3012335‑3012604

tATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAgc                                                                                                                                    >  2:670654/1‑140 (MQ=255)

   tGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGcc                                                                                                                                 <  1:1689931/140‑1 (MQ=255)

   tGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGcc                                                                                                                                 >  1:587127/1‑140 (MQ=255)

     aGCAAAGCGAAAGAAGGTATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCtt                                                                                                                               >  1:470319/1‑140 (MQ=255)

     aGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCtt                                                                                                                               >  1:1808345/1‑140 (MQ=255)

     aGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCtt                                                                                                                               >  2:938088/1‑140 (MQ=255)

     aGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGATTTGTTGATGCCGGATGCGGCGCTAGCGCCtt                                                                                                                               >  1:1438850/1‑140 (MQ=255)

       cAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAgcgc                                                                                                                                  <  2:970760/135‑1 (MQ=255)

       cAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAgcgc                                                                                                                                  >  1:970760/1‑135 (MQ=255)

        aaaGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATc                                                                                                                            >  2:1030355/1‑140 (MQ=255)

        aaaGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATc                                                                                                                            <  1:598189/140‑1 (MQ=255)

        aaaGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATc                                                                                                                            >  2:755771/1‑140 (MQ=255)

          aGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCg                                                                                                                          >  2:1788127/1‑140 (MQ=255)

          aGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCg                                                                                                                          >  1:936697/1‑140 (MQ=255)

          aGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCg                                                                                                                          <  2:2284557/140‑1 (MQ=255)

          aGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCg                                                                                                                          >  2:2328666/1‑140 (MQ=255)

            ggAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTc                                                                                                                        <  1:1894002/139‑1 (MQ=255)

            cGAAAGAAGGGATTGAAGGCAAAACTGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTc                                                                                                                        <  2:369726/140‑1 (MQ=255)

            cGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTc                                                                                                                        <  1:1030355/140‑1 (MQ=255)

            cGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTc                                                                                                                        <  1:278126/140‑1 (MQ=255)

            cGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTc                                                                                                                        <  2:944190/140‑1 (MQ=255)

            cGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTc                                                                                                                        >  1:1084887/1‑140 (MQ=255)

                    gggATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACaaaa                                                                                                                >  2:2015663/1‑140 (MQ=255)

                     ggATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAAc                                                                                                               <  2:1618872/140‑1 (MQ=255)

                      gATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCg                                                                                                                          <  2:1194860/128‑1 (MQ=255)

                      gATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCg                                                                                                                          >  1:1194860/1‑128 (MQ=255)

                          gAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGc                                                                                                          <  1:2117999/140‑1 (MQ=255)

                          gAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGc                                                                                                          <  2:1384125/140‑1 (MQ=255)

                          gAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGc                                                                                                          <  1:1715507/140‑1 (MQ=255)

                           aaGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCa                                                                                                         >  2:382470/1‑140 (MQ=255)

                                 aaaCAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCa                                                                                                   <  1:1289419/140‑1 (MQ=255)

                                 aaaCAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCa                                                                                                   <  2:541334/140‑1 (MQ=255)

                                 aaaCAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCa                                                                                                   <  1:995198/140‑1 (MQ=255)

                                    cAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATa                                                                                                <  1:420438/140‑1 (MQ=255)

                                      ggAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGa                                                                                              <  1:378184/140‑1 (MQ=255)

                                         aCGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTg                                                                                           <  1:2216824/140‑1 (MQ=255)

                                           ggTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGAt                                                                                             >  2:1222858/1‑136 (MQ=255)

                                           ggTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGAt                                                                                             <  1:1222858/136‑1 (MQ=255)

                                            gTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCaa                                                                                        >  1:1160489/1‑140 (MQ=255)

                                                 ttGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAAt                                                                                       >  2:593234/1‑136 (MQ=255)

                                                 ttGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCAc                                                                                   >  2:589486/1‑140 (MQ=255)

                                                      aGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTa                                                                              <  1:382470/140‑1 (MQ=255)

                                                       gTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAg                                                                             >  1:63640/1‑140 (MQ=255)

                                                         aaTTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGc                                                                           <  1:769273/140‑1 (MQ=255)

                                                              aaaGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGAt                                                                      >  1:539913/1‑140 (MQ=255)

                                                                aGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATaa                                                                    <  1:755771/140‑1 (MQ=255)

                                                                  gCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGCAGGCCTGATAAgg                                                                  >  1:2368380/1‑139 (MQ=255)

                                                                      ggtgggtAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAg                                                              >  2:683078/1‑140 (MQ=255)

                                                                              aTACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAg                                                      <  2:55640/140‑1 (MQ=255)

                                                                               tACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAgg                                                     <  2:2372930/140‑1 (MQ=255)

                                                                                 ccATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                   >  1:486591/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAGAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:102660/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATc                                                        <  1:502403/132‑1 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCa                                                       >  2:210100/1‑133 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCa                                                       <  1:210100/133‑1 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                  <  1:1396452/138‑1 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                  >  2:1396452/1‑138 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  2:426005/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:9518/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:155571/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:1311847/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:688512/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:2352920/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:2262024/1‑140 (MQ=255)

                                                                                    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                >  1:2181720/1‑140 (MQ=255)

                                                                                      cGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTg                                              >  1:420158/1‑140 (MQ=255)

                                                                                         ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCg                                           >  1:258579/1‑140 (MQ=255)

                                                                                         ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCg                                           >  2:812839/1‑140 (MQ=255)

                                                                                                 tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtcat                                   <  2:1160489/140‑1 (MQ=255)

                                                                                                 tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtcat                                   <  2:1084887/140‑1 (MQ=255)

                                                                                                 tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGAGTAGCGCATCAGGCAATTTGGCGTTTGtcat                                   <  2:1069411/140‑1 (MQ=255)

                                                                                                  gTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtcatc                                  <  2:486591/140‑1 (MQ=255)

                                                                                                   tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtcatca                                 >  1:1505054/1‑140 (MQ=255)

                                                                                                   tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtcat                                   >  2:466847/1‑138 (MQ=255)

                                                                                                        taagtGCGCTTTGTTGATGCCGGATCCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGGAGCGCATCAGGCAATTTGGCGTTTGTCATCAGtctc                            >  1:166495/1‑140 (MQ=255)

                                                                                                         aagtGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCa                           >  1:1165725/1‑140 (MQ=255)

                                                                                                         aagtGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCa                           <  2:155571/140‑1 (MQ=255)

                                                                                                          agtGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAg                          >  2:2008334/1‑140 (MQ=255)

                                                                                                           gtGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAgg                         <  2:2262024/140‑1 (MQ=255)

                                                                                                            tGCGCTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATCGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGc                        >  1:1880568/1‑140 (MQ=255)

                                                                                                             gcgcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGcc                       <  1:906285/140‑1 (MQ=255)

                                                                                                             gcgcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGcc                       <  2:1883948/140‑1 (MQ=255)

                                                                                                             gcgcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGcc                       >  2:498324/1‑140 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:2185121/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:513138/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:1655801/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:812839/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:2015663/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  2:9518/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  2:309632/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:1259569/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  2:2181720/140‑1 (MQ=255)

                                                                                                               gcTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  2:1311847/140‑1 (MQ=255)

                                                                                                               acTTTGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                     <  1:1211078/139‑1 (MQ=255)

                                                                                                                 tttGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt                   <  2:1213702/140‑1 (MQ=255)

                                                                                                                 tttGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt                   >  2:12807/1‑140 (MQ=255)

                                                                                                                 tttGTTGATGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt                   <  1:2008334/140‑1 (MQ=255)

                                                                                                                        aTGCCGGATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAt            >  2:275060/1‑140 (MQ=255)

                                                                                                                             ggATGCGGCGCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt       <  1:941712/140‑1 (MQ=255)

                                                                                                                                  cggcgCTAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGc  >  1:1992975/1‑140 (MQ=255)

TATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGC  >  NC_000913/3012335‑3012604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`