New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 375248 =NA (NA)17 (0.550) 7/240 2.2 NA noncoding (15/34 nt) other REP31g
?NC_000913 377507 = NA (NA)noncoding (16/34 nt) other REP32d

ATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACATTTCGCCCGTAGGCAGTCA  >  NC_000913/375111‑375385
                                                                                                                                          |                                                                                                                                          
tcaagacgttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgaa                                                                                                                                           <  2:390468‑M1/2‑1 (MQ=255)
   agacgttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgtctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtaAACGc                                                                                                                                        <  1:317393‑M1/5‑1 (MQ=255)
   agacgttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGc                                                                                                                                        <  1:56165‑M1/5‑1 (MQ=255)
      cgttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCtt                                                                                                                                     <  2:349419‑M1/8‑1 (MQ=255)
        ttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTAt                                                                                                                                   <  2:107544‑M1/10‑1 (MQ=255)
        ttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTAt                                                                                                                                   <  2:414033‑M1/10‑1 (MQ=255)
        ttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTAt                                                                                                                                   >  2:131058‑M1/131‑140 (MQ=255)
        ttaatccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTAt                                                                                                                                   >  1:156202‑M1/131‑140 (MQ=255)
            tccgttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgtctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtaAACGCCTTATCCgg                                                                                                                               >  2:317393‑M1/127‑140 (MQ=255)
            cgcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                                                                              >  1:84492/1‑140 (MQ=37)
              cACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCACCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt                                                                                                                            >  2:439725/1‑140 (MQ=37)
               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCATGGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                                                                                                           >  2:22758/1‑140 (MQ=11)
               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                                                                                                           >  2:125049/1‑140 (MQ=37)
               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGCCGCATCAGGCATCTGCGTACGACTGCCGGGTGCCGCATAAACGCCTTATCCGGCCTa                                                                                                                           >  2:122769/1‑140 (MQ=11)
                ttatcacgagggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTa                                                                                                                           >  2:566382‑M1/123‑140 (MQ=255)
                cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                                                                                                                          >  1:239010/1‑140 (MQ=37)
                      ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAcacttcg                                                                                                                    <  1:556947/140‑7 (MQ=255)
                       cGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCATGGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAcacttcgc                                                                                                                   <  1:22758/140‑8 (MQ=11)
                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  <  2:574738/140‑1 (MQ=40)
                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:177817/1‑140 (MQ=40)
                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  <  2:207081/140‑1 (MQ=40)
                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  <  1:177817/140‑1 (MQ=40)
                        agggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgc                                                                                                                   >  1:390468‑M1/115‑140 (MQ=255)
                         gggttatgatcacagttattattttgtctcgagttttattggtgagcatatggcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:582941‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  1:530120‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:251828‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:269666‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:308704‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:481378‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  1:35752‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:503821‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  1:132075‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagttttattggcgagaatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:407259‑M1/114‑140 (MQ=255)
                         gggttatgatcacagctattattttgtctccagtttgatgggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGgcg                                                                                                                  >  2:221333‑M1/114‑140 (MQ=255)
                             cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                                                             <  2:204427/140‑1 (MQ=40)
                             cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                                                             <  2:87351/140‑1 (MQ=40)
                               tgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                                                             >  2:88929‑M1/108‑139 (MQ=255)
                               tgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                                                                             <  1:88929‑M1/32‑1 (MQ=255)
                                cgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAAtt                                                                                                          >  2:262620/1‑140 (MQ=40)
                                  tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                                                                        <  2:407025/140‑1 (MQ=40)
                                  tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                                                                        <  2:57890/140‑1 (MQ=40)
                                  tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                                                                        <  2:239010/140‑1 (MQ=40)
                                  tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCATCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                                                                        <  2:10064/140‑1 (MQ=255)
                                             tCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATa                                                                                             <  2:386995/140‑1 (MQ=40)
                                              ccGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                                                                                            <  2:402669/140‑1 (MQ=40)
                                                ggCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                                                                                          <  1:587635/140‑1 (MQ=40)
                                                 gCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAc                                                                                         >  1:531883/1‑140 (MQ=40)
                                                 gCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAc                                                                                         >  1:383429/1‑140 (MQ=40)
                                                  gtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAc                                                                                         <  2:170351‑M1/52‑1 (MQ=255)
                                                      cGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACACTTCGCCCGTAAGCCGTAGGCCTGATAAGAcgcgcaa                                                                                   >  2:539745/1‑137 (MQ=11)
                                                                 gtaagccgTAGGCCTGGTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                        >  2:139057/8‑140 (MQ=255)
                                                                 gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCATGGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                        >  1:524469/8‑140 (MQ=11)
                                                                 gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                        >  2:586396/8‑140 (MQ=255)
                                                                 gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                        >  1:556606/8‑140 (MQ=255)
                                                                 gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                        >  1:428246/8‑140 (MQ=255)
                                                                 gtaagccgTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                                                                        >  1:434218/8‑140 (MQ=255)
                                                                    gagcatattgcctaccacgccaataaactgaatatgcgttgataatagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAg                                                                      <  1:302351‑M1/70‑1 (MQ=255)
                                                                     tttGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGc                                                                    <  2:144538/140‑1 (MQ=34)
                                                                      ttGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCATAGCGTCGCATCAGGc                                                                    <  1:125049/140‑1 (MQ=255)
                                                                          aGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATcat                                                               <  2:161235/140‑3 (MQ=255)
                                                                              cTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGcaca                                                           >  2:102849/1‑140 (MQ=34)
                                                                                gATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACg                                                         <  1:577747/140‑1 (MQ=35)
                                                                                      aCGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGcc                                                   >  1:238916/1‑140 (MQ=34)
                                                                                         cgTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGa                                                <  1:556295/140‑1 (MQ=34)
                                                                                         cgTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGa                                                <  1:347815/140‑1 (MQ=34)
                                                                                          gcatAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGa                                                <  2:182179/137‑1 (MQ=21)
                                                                                          gcatAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGa                                                <  1:165009/137‑1 (MQ=25)
                                                                                               gCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGa                                           <  2:486430/140‑1 (MQ=37)
                                                                                                  tCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATaa                                        >  1:137962/1‑140 (MQ=38)
                                                                                                      aTCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAGCGt                                    <  1:555071/140‑1 (MQ=255)
                                                                                                      aTCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGt                                    <  1:557461/140‑1 (MQ=255)
                                                                                                                tGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGc                          >  2:559182/1‑140 (MQ=255)
                                                                                                                 tagcacgactgccggatgcggcgtgAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCAGcc                         >  2:302351‑M1/26‑140 (MQ=255)
                                                                                                                   gcACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTa                       <  2:562954/140‑1 (MQ=255)
                                                                                                                     aCGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACa                     >  2:379111/1‑140 (MQ=255)
                                                                                                                                 tGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACATTTCGCCCGTAg         >  2:315473/1‑140 (MQ=255)
                                                                                                                                   cggggTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTACACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACATTTCGCCCGTAGGc       <  2:383429/140‑1 (MQ=255)
                                                                                                                                      cgTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACATTTCGCCCGTAGGCAGt    >  2:470954/1‑140 (MQ=255)
                                                                                                                                        tAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACATTTCGCCCGTAGGCAGTCa  <  2:84492/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                          
ATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGATAAACGTCTTGTCCGGCCTACATTTCGCCCGTAGGCAGTCA  >  NC_000913/375111‑375385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.