| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3231279 | NA (NA) | 4 (0.070) | 4/224 | 5.4 | NA | noncoding (27/34 nt) | other | REP231a |
| ? | NC_000913 | = 3234695 | NA (NA) | noncoding (30/34 nt) | other | REP233b | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3231130‑3231279‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcggcgtaaacgccttatccgGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTCTTGTT < NC_000913/3234695‑3234563 TTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAAC > 2:954331/1‑140 AAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTAT < 1:1126183/140‑1 AATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATC < 2:311318/140‑1 AATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATC < 1:792440/140‑1 TTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCG > 1:561033/1‑140 ACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGGCCTA > 2:420988/1‑140 TGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCA < 1:420988/140‑1 CATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGC < 2:517747/124‑1 CATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGC > 1:517747/1‑124 CGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCA < 1:221027/140‑1 CGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCA > 1:1048605/1‑140 CGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCA < 1:91997/140‑1 CGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCA < 1:26099/140‑1 GGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCAT < 1:947272/140‑1 GATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATC > 1:479182/1‑140 ATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCG < 1:1209786/140‑1 CGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCT < 2:246055/140‑1 CGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACA < 1:926034/140‑1 ACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTC > 2:221982/1‑140 CTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTCTTGT > 2:1050990/1‑140 TTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTCTTGTT > 1:879489/1‑140 TTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTCTTGTT > 1:746660/1‑140 TTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTCTTGTT > 1:260283/1‑140 TTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3231130‑3231279‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcggcgtaaacgccttatccgGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTCTGCCCAGTTCTGGAATCGCGCTTCCATAAAACAAAAAATCCCTGTCACCATCGTCTACATTCTCTTGTT < NC_000913/3234695‑3234563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |