BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,222,536	G→T	A118S (GCC→TCC)	dld →	D‑lactate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,222,536	0	G	T	100.0%	380.2 / NA	108	A118S (GCC→TCC)	dld	D‑lactate dehydrogenase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (56/52); total (56/52)

Only 100 of 109 total aligned reads displayed.

ATGCAGGCCGCC‑AATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGC  >  NC_000913/2222404‑2222671

aTGCAGGCCGCCAAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATc                                                                                                                                   >  2:13310/1‑140 (MQ=255)

      gccgcc‑AATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGcac                                                                                                                            <  1:133668/140‑1 (MQ=255)

       ccgcc‑AATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGcacc                                                                                                                           <  1:1034573/140‑1 (MQ=255)

                   ggCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTc                                                                                                                >  2:8670/1‑140 (MQ=255)

                   ggCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTc                                                                                                                >  1:155383/1‑140 (MQ=255)

                    gCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCg                                                                                                               >  2:563091/1‑140 (MQ=255)

                    gCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCg                                                                                                               >  1:400160/1‑140 (MQ=255)

                    gCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCg                                                                                                               <  1:971307/140‑1 (MQ=255)

                         aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGa                                                                                                          >  1:1064355/1‑140 (MQ=255)

                         aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGa                                                                                                          >  2:91408/1‑140 (MQ=255)

                         aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGa                                                                                                          >  1:731860/1‑140 (MQ=255)

                         aCCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGa                                                                                                          >  1:958450/1‑140 (MQ=255)

                              aGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAg                                                                                                     >  2:313001/1‑140 (MQ=255)

                              aGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAg                                                                                                     >  2:37631/1‑140 (MQ=255)

                              aGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAg                                                                                                     >  2:433851/1‑140 (MQ=255)

                              aGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGCGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGaaaaaa                                                                                                     >  2:326866/1‑139 (MQ=255)

                                gATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGcc                                                                                                   >  2:1180120/1‑140 (MQ=255)

                                   cGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTc                                                                                                >  1:353466/1‑140 (MQ=255)

                                    gACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCa                                                                                               <  1:110072/140‑1 (MQ=255)

                                      cGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCaaa                                                                                             <  1:1051953/140‑1 (MQ=255)

                                           aaCGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCt                                                                                        >  1:848521/1‑140 (MQ=255)

                                           aaCGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCt                                                                                        >  1:784328/1‑140 (MQ=255)

                                                tAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCa                                                                                               <  1:709598/128‑1 (MQ=255)

                                                tAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCa                                                                                               >  2:709598/1‑128 (MQ=255)

                                                       tATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAAcc                                                                            <  1:399212/140‑1 (MQ=255)

                                                       tATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAAcc                                                                            >  2:816143/1‑140 (MQ=255)

                                                        aTGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCg                                                                           >  1:272950/1‑140 (MQ=255)

                                                          gATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCa                                                                         <  2:446200/140‑1 (MQ=255)

                                                          gATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCa                                                                         >  2:770432/1‑140 (MQ=255)

                                                            tCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTTAAACCGCTGGGACGCGAACCGCACt                                                                       <  2:826299/140‑1 (MQ=255)

                                                            tCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACt                                                                       <  1:433851/140‑1 (MQ=255)

                                                            tCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACt                                                                       <  2:784328/140‑1 (MQ=255)

                                                            tCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACt                                                                       <  1:492127/140‑1 (MQ=255)

                                                              gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGa                                                                               >  2:51099/1‑130 (MQ=255)

                                                              gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCa                                                                     >  2:681787/1‑140 (MQ=255)

                                                              gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCa                                                                     >  2:593012/1‑140 (MQ=255)

                                                              gcgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCa                                                                     >  1:1162263/1‑140 (MQ=255)

                                                               cgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGaa                                                                              >  2:739852/1‑130 (MQ=255)

                                                               cgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGaa                                                                              <  1:739852/130‑1 (MQ=255)

                                                               cgATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAg                                                                    >  2:1174091/1‑140 (MQ=255)

                                                                gATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGt                                                                   >  1:260490/1‑140 (MQ=255)

                                                                  tGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGa                                                                 <  1:70499/140‑1 (MQ=255)

                                                                   gTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCa                                                                     <  1:974902/135‑1 (MQ=255)

                                                                    tCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGAtt                                                               <  1:37631/140‑1 (MQ=255)

                                                                       ttATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGATCAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa                                                            <  2:833741/140‑1 (MQ=255)

                                                                       ttATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa                                                            <  1:816143/140‑1 (MQ=255)

                                                                       ttATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa                                                            <  2:958450/140‑1 (MQ=255)

                                                                       ttATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa                                                            <  2:260490/140‑1 (MQ=255)

                                                                        tATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCT‑‑GACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:1086550/140‑1 (MQ=255)

                                                                          tcatcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:681787/140‑1 (MQ=255)

                                                                          tcatcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:563091/140‑1 (MQ=255)

                                                                          tcatcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:854463/140‑1 (MQ=255)

                                                                          tcatcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:1132730/140‑1 (MQ=255)

                                                                          tcatcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  2:344064/140‑1 (MQ=255)

                                                                          tcatcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:1174091/140‑1 (MQ=255)

                                                                           catcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcat                                                        <  2:453727/140‑1 (MQ=255)

                                                                            atcaGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcatc                                                       <  2:155383/140‑1 (MQ=255)

                                                                              caGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCgt                                                     >  2:46899/1‑140 (MQ=255)

                                                                              caGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCgt                                                     >  2:167108/1‑140 (MQ=255)

                                                                              caGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCgt                                                     >  2:1078225/1‑140 (MQ=255)

                                                                              caGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCgt                                                     >  2:428405/1‑140 (MQ=255)

                                                                                gCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCgtgt                                                   >  2:824536/1‑140 (MQ=255)

                                                                                  aCCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGtat                                                 <  2:456970/140‑1 (MQ=255)

                                                                                    ccTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAg                                               >  1:282862/1‑140 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcatc                                                       <  1:387893/130‑1 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcatc                                                       >  2:387893/1‑130 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         >  2:536660/1‑128 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca                                                         <  1:536660/128‑1 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGgc                                             >  1:1075703/1‑140 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGgc                                             >  2:1072434/1‑140 (MQ=255)

                                                                                      tGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGCGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGgc                                             >  1:503073/1‑140 (MQ=255)

                                                                                        cGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGgcgc                                           >  2:380966/1‑140 (MQ=255)

                                                                                        cGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGgcgc                                           >  2:759484/1‑140 (MQ=255)

                                                                                            tcGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcatc                                                       >  2:473306/1‑124 (MQ=255)

                                                                                            tcGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcatc                                                       <  1:473306/124‑1 (MQ=255)

                                                                                              gACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGt                                     >  2:770437/1‑140 (MQ=255)

                                                                                                 aaGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCAt                                  <  1:313001/140‑1 (MQ=255)

                                                                                                   gCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcg                                >  1:129911/1‑140 (MQ=255)

                                                                                                   gCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcg                                >  2:413703/1‑140 (MQ=255)

                                                                                                    cTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcgg                               <  2:1083505/140‑1 (MQ=255)

                                                                                                      gCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcggcg                             <  1:786974/140‑1 (MQ=255)

                                                                                                      gCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcggcg                             <  1:13310/140‑1 (MQ=255)

                                                                                                      gCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcggcg                             <  1:168381/140‑1 (MQ=255)

                                                                                                      gCACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcggcg                             <  2:282862/140‑1 (MQ=255)

                                                                                                       cACGTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATcggcgg                            >  2:935161/1‑140 (MQ=255)

                                                                                                          gTTCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTAt                         <  2:848521/140‑1 (MQ=255)

                                                                                                           ttCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTAtt                        <  1:1078225/140‑1 (MQ=255)

                                                                                                            tCTTGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTAttt                       <  1:167108/140‑1 (MQ=255)

                                                                                                               tGGCAAGGGCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGAGTTTGTa                    >  1:879691/1‑140 (MQ=255)

                                                                                                                     gggCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTTTtacaaat              >  2:826704/1‑138 (MQ=255)

                                                                                                                      ggCGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTaaccaatc             >  1:480150/1‑135 (MQ=255)

                                                                                                                        cGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTTTTAAAAATCcg           >  2:1076085/1‑140 (MQ=255)

                                                                                                                        cGAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCcg           <  1:770437/140‑1 (MQ=255)

                                                                                                                         gAACAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACACCTCcgg          <  2:879691/140‑1 (MQ=255)

                                                                                                                          aaCAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCcggc         >  1:1167409/1‑140 (MQ=255)

                                                                                                                            cAGGTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCcggcgg       <  2:129911/140‑1 (MQ=255)

                                                                                                                               gTGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTc    <  1:1155885/140‑1 (MQ=255)

                                                                                                                                tGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCg   <  1:428405/140‑1 (MQ=255)

                                                                                                                                tGCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCg   <  1:935161/140‑1 (MQ=255)

                                                                                                                                 gCTGTCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGc  <  1:326866/140‑1 (MQ=255)

ATGCAGGCCGCC‑AATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGC  >  NC_000913/2222404‑2222671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`