BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	375183 =	NA (NA)	29 (0.440)	15/238	2.5	NA	intergenic (+302/‑276)	mhpE/mhpT	4‑hydroxy‑2‑oxovalerate aldolase/3‑hydroxyphenylpropionate/3‑ hydroxycinnamate:H(+) symporter
*	?	NC_000913	377372 =	NA (NA)	29 (0.440)	15/238	2.5	NA	noncoding (37/37 nt)	other	REP32a

Only 100 of 101 total aligned reads displayed.

AACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAT  >  NC_000913/375046‑375321

gtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGt                                                                                                                                              >  2:529043‑M1/139‑140 (MQ=255)

aaCGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTa                                                                                                                                             <  2:435371/140‑1 (MQ=255)

    acgccttatccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGc                                                                                                                                          >  1:1141285‑M1/135‑140 (MQ=255)

          ccGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                                                   <  1:1091420/140‑1 (MQ=255)

           cGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                                                  <  1:562744/140‑1 (MQ=255)

           atccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATaa                                                                                                                                   >  1:393857‑M1/128‑140 (MQ=255)

           atccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATaa                                                                                                                                   <  2:763369‑M1/13‑1 (MQ=255)

           atccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATaa                                                                                                                                   >  1:189478‑M1/128‑140 (MQ=255)

           atccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATaa                                                                                                                                   >  1:791993‑M1/128‑140 (MQ=255)

            tccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAg                                                                                                                                  >  2:252446‑M1/127‑140 (MQ=255)

            tccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAg                                                                                                                                  >  1:570678‑M1/127‑140 (MQ=255)

            tccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAg                                                                                                                                  >  1:1074359‑M1/127‑140 (MQ=255)

               cTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAcgc                                                                                                                              >  1:301364/1‑140 (MQ=255)

                tACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAcgcg                                                                                                                             <  2:537247/140‑1 (MQ=255)

                 cctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGAcgcg                                                                                                                             <  1:602104‑M1/19‑1 (MQ=255)

                  cGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑t‑t                                                                                                                         >  1:982512/1‑140 (MQ=255)

                           cgGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCa                                                                                                               <  2:22053/140‑1 (MQ=40)

                             gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:158966/8‑140 (MQ=11)

                             gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  2:710425/8‑140 (MQ=11)

                             gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:70778/8‑140 (MQ=255)

                             gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:525681/8‑140 (MQ=255)

                             gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  2:206292/8‑140 (MQ=255)

                             gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:366028/8‑140 (MQ=255)

                             gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:1020307/8‑140 (MQ=255)

                             gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:16058/8‑140 (MQ=255)

                             cagacttGTAGGCATGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATc                                                                                                             >  1:460195/6‑140 (MQ=255)

                             ataaaccgTAGGCCTGATAAGACGCGCATAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCAt                                                                                                              >  1:53047/8‑140 (MQ=11)

                             ataaaccgTAGGCCTGATAAGACGCGCATAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCAt                                                                                                              >  2:564338/8‑140 (MQ=11)

                              taaaccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAc                                                                                                                                >  1:1169032/7‑123 (MQ=255)

                              taaaccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAc                                                                                                                                <  2:1169032/117‑1 (MQ=255)

                              gAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCA‑AA‑GCGTCGCATc                                                                                                             <  2:1135251/140‑1 (MQ=11)

                               gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCa                                                                                                            <  2:1016646‑M1/33‑1 (MQ=255)

                               gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCa                                                                                                            <  2:327885‑M1/33‑1 (MQ=255)

                               gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCa                                                                                                            <  1:509924‑M1/33‑1 (MQ=255)

                               gtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGACGCATCa                                                                                                            <  1:729207‑M1/33‑1 (MQ=255)

                                 accgTAGGCCTGATAAGACGCGCATAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAgg                                                                                                          <  2:495578/137‑1 (MQ=255)

                                     tAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCt                                                                                                     <  2:1253629/140‑1 (MQ=37)

                                      aGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTg                                                                                                    >  2:1150608/1‑140 (MQ=37)

                                        gCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGt                                                                                                                   <  1:464754/123‑1 (MQ=38)

                                        gCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGt                                                                                                                   >  2:464754/1‑123 (MQ=37)

                                           tGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCAc                                                                                               <  1:765707/140‑1 (MQ=34)

                                                      g‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGAt                                                                                    >  1:129758/1‑140 (MQ=34)

                                                           gCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcgg                                                                                <  2:1172733/140‑1 (MQ=34)

                                                               cGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTa                                                                            >  1:1141058/1‑140 (MQ=35)

                                                                tcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTaa                                                                           <  2:1100768‑M1/66‑1 (MQ=255)

                                                                  gcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAAc                                                                         <  1:390752‑M1/68‑1 (MQ=255)

                                                                   tCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGc                                                                       <  2:158966/140‑1 (MQ=255)

                                                                        gataatagcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTa                                                                   >  2:77795/8‑140 (MQ=255)

                                                                                 aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                                          >  2:46912/1‑140 (MQ=37)

                                                                                 aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                                          >  1:302752/1‑140 (MQ=37)

                                                                                 aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCAT‑GGCGCTCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAc                                                         >  1:850713/1‑140 (MQ=11)

                                                                                    gactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCACACGACTGCCGGATGCGA‑‑TAAACGTCTTGTCCGGcctacattt                                                     <  1:383530‑M1/86‑5 (MQ=255)

                                                                                     cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGa                                                      <  1:984891/140‑1 (MQ=38)

                                                                                      tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAt                                                     >  1:740003/1‑140 (MQ=39)

                                                                                        ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCAT‑GGCGCTCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAcacttcgc                                                  <  2:850713/140‑8 (MQ=11)

                                                                                          ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  2:460195/140‑1 (MQ=40)

                                                                                          ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  2:1244794/140‑1 (MQ=40)

                                                                                          ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  1:296377/140‑1 (MQ=40)

                                                                                          ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  1:77795/140‑1 (MQ=40)

                                                                                          ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  2:53047/140‑1 (MQ=40)

                                                                                          ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  1:932727/140‑1 (MQ=40)

                                                                                          cggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 >  1:1100768‑M1/49‑140 (MQ=255)

                                                                                              gcggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCggg                                             <  2:16058/140‑1 (MQ=40)

                                                                                               gcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                            >  1:327885‑M1/44‑140 (MQ=255)

                                                                                                    gtgaacgccttatccggtctacgcttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                       >  2:729207‑M1/39‑140 (MQ=255)

                                                                                                     gAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGt                                      <  1:833822/140‑1 (MQ=40)

                                                                                                         gCCTTGTCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCGCGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGc                                  <  2:1164179/140‑1 (MQ=255)

                                                                                                          ccTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 >  1:798629/1‑124 (MQ=255)

                                                                                                          ccTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  2:798629/124‑1 (MQ=255)

                                                                                                           ccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 <  1:1028198‑M1/92‑1 (MQ=255)

                                                                                                           ccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                 >  2:1028198‑M1/32‑123 (MQ=255)

                                                                                                                tccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           >  2:390752‑M1/27‑140 (MQ=255)

                                                                                                                ccGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           <  1:783397/140‑1 (MQ=40)

                                                                                                                ccGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           <  2:302752/140‑1 (MQ=40)

                                                                                                                  ggCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                         <  2:973470/140‑1 (MQ=40)

                                                                                                                   gCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAc                        <  1:790956/140‑1 (MQ=40)

                                                                                                                     cTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTTCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAcgc                      >  1:1083964/1‑140 (MQ=255)

                                                                                                                              gcgcGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTc             >  2:1007968/1‑140 (MQ=39)

                                                                                                                               gcccataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCg            <  1:576305‑M1/129‑1 (MQ=255)

                                                                                                                                  gagaATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTTCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt         <  2:1083964/140‑1 (MQ=21)

                                                                                                                                  gagaATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt         >  2:671311/1‑140 (MQ=34)

                                                                                                                                  gagaATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt         <  1:671311/140‑1 (MQ=34)

                                                                                                                                  cgtaagccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt         <  2:557166‑M1/132‑1 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGt                    >  2:506734‑M1/8‑128 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGt                    <  1:506734‑M1/121‑1 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc        <  1:364458‑M1/133‑1 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGAGTCGCATc        <  2:333267‑M1/133‑1 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑C‑AAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           >  1:785036‑M1/8‑122 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑C‑AAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           <  2:785036‑M1/115‑1 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑C‑AAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           <  1:432075‑M1/115‑1 (MQ=255)

                                                                                                                                   gtaagccGTAGGCCTGATAAGACGCG‑C‑AAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                           >  2:432075‑M1/8‑122 (MQ=255)

                                                                                                                                   gtaagccGTAGACCTGATAAGACGCG‑C‑AAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt         <  1:859611‑M1/133‑1 (MQ=255)

                                                                                                                                   ataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                         <  1:864926‑M1/116‑1 (MQ=255)

                                                                                                                                   ataaaccGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                         >  2:864926‑M1/8‑123 (MQ=255)

                                                                                                                                    taaaccGTAGGCCTGATAAGACGCG‑CATA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                         <  1:333113‑M1/117‑1 (MQ=255)

                                                                                                                                    taaaccGTAGGCCTGATAAGACGCG‑CATA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                         >  2:333113‑M1/7‑123 (MQ=255)

                                                                                                                                     aaaccGTAGGCCTGATAAGACGCG‑CATA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa       <  1:108728‑M1/135‑1 (MQ=255)

                                                                                                                                       tttGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGc    >  2:646201/1‑140 (MQ=35)

                                                                                                                                       tttGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGc    <  1:1237624/140‑1 (MQ=34)

                                                                                                                                         tGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAt  <  2:1205790/140‑1 (MQ=34)

AACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TA‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAT  >  NC_000913/375046‑375321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.