Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,964,942	G→T	L37M (CTG→ATG)	flhA ←	flagellar biosynthesis protein FlhA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,964,942	0	G	T	100.0%	225.5 / NA	63	L37M (CTG→ATG)	flhA	flagellar biosynthesis protein FlhA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (40/23);  total (40/23)

TGGTAAACAACAGAATGGTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCAGCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTTAATAAAATCCA  >  NC_000913/1964807‑1965077                                                                                                                                        |                                                                                                                                        tGGTAAACAACAGAATGGTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCAcc                                                                                                                                     >  2:534354/1‑140 (MQ=255)    tAAACAACAGAATGGTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACcatc                                                                                                                                  >  1:568484/1‑140 (MQ=255)          acaGAATGGTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGAc                                                                                                                            <  2:924333/140‑1 (MQ=255)                tGGTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATc                                                                                                                      >  2:21409/1‑140 (MQ=255)                  gTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCaa                                                                                                                    >  2:1162790/1‑140 (MQ=255)                   tCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAAc                                                                                                                   >  1:1001173/1‑140 (MQ=255)                            cagcaAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCaaa                                                                                                          >  1:658964/1‑140 (MQ=255)                              gcaAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAAt                                                                                                        <  2:568484/140‑1 (MQ=255)                                   cTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTc                                                                                                   <  1:860820/140‑1 (MQ=255)                                         cGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCaa                                                                                             >  1:1008623/1‑140 (MQ=255)                                             cgcTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACATGATCAAAATCGGTCCGGCAAGGAt                                                                                         >  2:1277335/1‑140 (MQ=255)                                             cgcTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAgg                                                                                           <  2:1159672/138‑1 (MQ=255)                                             cgcTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAgg                                                                                           >  1:1159672/1‑138 (MQ=255)                                                tGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTg                                                                                      <  2:1271135/140‑1 (MQ=255)                                                tGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTg                                                                                      >  1:559343/1‑140 (MQ=255)                                                   gTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCa                                                                                   <  1:534354/140‑1 (MQ=255)                                                            gCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGa                                                                          >  2:923015/1‑140 (MQ=255)                                                            gCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGa                                                                          >  1:1203823/1‑140 (MQ=255)                                                                  aGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAg                                                                    >  2:259371/1‑140 (MQ=255)                                                                   gCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTc                                                                            >  1:236434/1‑131 (MQ=255)                                                                   gCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTc                                                                            <  2:236434/131‑1 (MQ=255)                                                                    cAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGt                                                                  <  2:175520/140‑1 (MQ=255)                                                                           aTGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCggg                                                           >  1:492987/1‑140 (MQ=255)                                                                            tGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGc                                                          >  1:1118934/1‑140 (MQ=255)                                                                              aTCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAg                                                        >  1:520994/1‑140 (MQ=255)                                                                              aTCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAg                                                        >  1:623846/1‑140 (MQ=255)                                                                              aTCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAg                                                        >  2:38627/1‑140 (MQ=255)                                                                                 gACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGgcg                                                     <  1:789633/140‑1 (MQ=255)                                                                                    aaGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCgcag                                                  >  2:703449/1‑140 (MQ=255)                                                                                      ggCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGCGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCgcagca                                                >  2:956372/1‑140 (MQ=255)                                                                                       gCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCAt                                               <  1:996859/140‑1 (MQ=255)                                                                                         aaTATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATcg                                             >  2:148189/1‑140 (MQ=255)                                                                                          atatTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATcgc                                            <  1:38627/140‑1 (MQ=255)                                                                                           tatTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATcgcg                                           <  1:654017/140‑1 (MQ=255)                                                                                           tatTGAAGGT‑‑ACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGc                                         >  1:110654/1‑140 (MQ=255)                                                                                            atTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCgg                                          <  2:1212511/140‑1 (MQ=255)                                                                                             ttGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGc                                         <  2:1008623/140‑1 (MQ=255)                                                                                                aaGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAg                                      >  1:581108/1‑140 (MQ=255)                                                                                                aaGGTAAACAACAGGTCGAGTATGAATGCGGGCAGCGGCATCACCATAATCGACAAGATCAACATGACTAAAATCGGTCCGGCCAGGATCAGCCATTGTGTCGATTTCAGGATTTCGGGTAGACGAAGCATcgccgcaaa                                      >  2:1019396/1‑137 (MQ=255)                                                                                                 aGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGa                                     <  2:862050/140‑1 (MQ=255)                                                                                                 aGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGa                                     <  1:4083/140‑1 (MQ=255)                                                                                                  ggTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCgg                                          >  2:49336/1‑134 (MQ=255)                                                                                                  ggTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCgg                                          <  1:49336/134‑1 (MQ=255)                                                                                                  ggTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGAt                                    >  2:1009647/1‑140 (MQ=255)                                                                                                     aaaCAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTAc                                 >  1:334257/1‑140 (MQ=255)                                                                                                     aaaCAACAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCAATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTAc                                 >  1:549763/1‑140 (MQ=255)                                                                                                      aacaacAGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACt                                <  2:549763/140‑1 (MQ=255)                                                                                                         aacaGGTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCAt                             <  1:812630/140‑1 (MQ=255)                                                                                                             ggTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGt                         <  1:148189/140‑1 (MQ=255)                                                                                                             ggTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGt                         >  1:225473/1‑140 (MQ=255)                                                                                                             ggTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGt                         >  1:1236271/1‑140 (MQ=255)                                                                                                              gTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTc                        >  2:918345/1‑140 (MQ=255)                                                                                                              gTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTc                        >  2:548183/1‑140 (MQ=255)                                                                                                              gTCGAGTATGAATGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTc                        >  1:490912/1‑140 (MQ=255)                                                                                                                        aaTGCGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGt              <  2:520994/140‑1 (MQ=255)                                                                                                                            cGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaat          >  1:926282/1‑140 (MQ=255)                                                                                                                            cGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaat          >  2:825736/1‑140 (MQ=255)                                                                                                                            cGGGCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaat          >  2:173892/1‑140 (MQ=255)                                                                                                                             gggCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaata         >  2:120365/1‑140 (MQ=255)                                                                                                                             gggCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaata         <  1:1009647/140‑1 (MQ=255)                                                                                                                              ggCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaataa        >  2:85278/1‑140 (MQ=255)                                                                                                                              ggCAGTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTtaataa        >  2:451672/1‑140 (MQ=255)                                                                                                                                  gTGGCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTTAATAAAATc    >  1:1268360/1‑140 (MQ=255)                                                                                                                                    ggCATCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTTAATAAAATCCa  <  1:259371/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        TGGTAAACAACAGAATGGTCGGAAACGCAGCAAACTCAAGCGTGCGCTGGGTAAACATCGCCACCAGCAACACCATGATCGACAAGGCAATATTGAAGGTAAACAACAGGTCGAGTATGAATGCGGGCAGTGGCAGCACCATCATCGACAAGATCAACAGGATCAAAATCGGTCCGGCAAGGATCTGCCATTGTGTCGATTTCAGGTTTGCGGGCAGGCGCAGCATCGCGGCCAGATTACTCATGGGTCGGTTTCTCGTTAATAAAATCCA  >  NC_000913/1964807‑1965077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑