BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	147,740	A→C	Q258P (CAG→CCG)	rpnC →	recombination‑promoting nuclease RpnC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	147,740	0	A	C	100.0%	379.4 / NA	97	Q258P (CAG→CCG)	rpnC	recombination‑promoting nuclease RpnC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (50/47); total (50/47)

TATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTACC  >  NC_000913/147609‑147876

tatGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGCAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGaa                                                                                                                                  >  1:520265/1‑140 (MQ=255)

  tgctgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGa                                                                                                                                <  2:770180/140‑1 (MQ=255)

  tgctgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGa                                                                                                                                <  1:625117/140‑1 (MQ=255)

  tgctgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGa                                                                                                                                <  2:520265/140‑1 (MQ=255)

     tgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGGGACTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAg                                                                                                                             >  1:201378/1‑140 (MQ=255)

     tgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAg                                                                                                                             >  2:170503/1‑140 (MQ=255)

     tgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAg                                                                                                                             >  2:242605/1‑140 (MQ=255)

       cAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGa                                                                                                                           >  1:815209/1‑140 (MQ=255)

        aaCGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTccgca                                                                                                                                       <  2:884893/127‑1 (MQ=255)

        aaCGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTccgca                                                                                                                                       >  1:884893/1‑127 (MQ=255)

          cgcgGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGaagt                                                                                                                        >  2:74728/1‑140 (MQ=255)

          cgcgGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGaagt                                                                                                                        >  2:243383/1‑140 (MQ=255)

               tCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTc                                                                                                                   >  1:217555/1‑140 (MQ=255)

                cATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCa                                                                                                                  <  2:473645/140‑1 (MQ=255)

                       aaCAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTc                                                                                                           >  2:1082882/1‑140 (MQ=255)

                       aaCAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTc                                                                                                           >  2:592230/1‑140 (MQ=255)

                         cAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGc                                                                                                         >  1:948203/1‑140 (MQ=255)

                         cAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGc                                                                                                         >  1:499559/1‑140 (MQ=255)

                           aGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGccc                                                                                                       >  1:1135519/1‑140 (MQ=255)

                           aGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGccc                                                                                                       <  2:815209/140‑1 (MQ=255)

                           aGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGccc                                                                                                       >  1:715386/1‑140 (MQ=255)

                            gCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCa                                                                                                      >  2:536472/1‑140 (MQ=255)

                              ggATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGc                                                                                                    <  2:499559/140‑1 (MQ=255)

                                aTTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGt                                                                                                  <  1:243383/140‑1 (MQ=255)

                                 tttGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGtc                                                                                                 >  2:1182645/1‑140 (MQ=255)

                                   tGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGtctt                                                                                               <  1:242605/140‑1 (MQ=255)

                                   tGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGtctt                                                                                               <  2:167206/140‑1 (MQ=255)

                                   tGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGtctt                                                                                               <  2:951560/140‑1 (MQ=255)

                                     ttttACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGtcttct                                                                                             <  2:1187839/140‑1 (MQ=255)

                                     ttttACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGtcttct                                                                                             <  2:749503/140‑1 (MQ=255)

                                          cGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTa                                                                                        >  2:33617/1‑140 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGc                                                                                                    >  1:963548/1‑123 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGc                                                                                                    <  2:963548/123‑1 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGa                                                                                           >  1:732668/1‑132 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGa                                                                                           <  2:732668/132‑1 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTa                                                                                        <  2:830652/135‑1 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTa                                                                                        >  1:830652/1‑135 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGa                                                                                   >  2:953762/1‑140 (MQ=255)

                                               tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGa                                                                                   <  2:217555/140‑1 (MQ=255)

                                                    agagaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGtc                                                                              >  1:951830/1‑140 (MQ=255)

                                                    agagaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGtc                                                                              >  2:855085/1‑140 (MQ=255)

                                                      agaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGATAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGa                                                                                   >  1:46624/1‑133 (MQ=255)

                                                      agaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGATAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGa                                                                                   <  2:46624/133‑1 (MQ=255)

                                                      agaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGtctc                                                                            >  2:192644/1‑140 (MQ=255)

                                                       gaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCg                                                                           >  1:519452/1‑140 (MQ=255)

                                                         cAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCggg                                                                         >  2:221240/1‑140 (MQ=255)

                                                         cAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCggg                                                                         >  2:306585/1‑140 (MQ=255)

                                                           gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGaa                                                                       >  1:339150/1‑140 (MQ=255)

                                                           gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGaa                                                                       >  1:463158/1‑140 (MQ=255)

                                                           gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGaa                                                                       >  2:670360/1‑140 (MQ=255)

                                                           gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGaa                                                                       >  2:1158033/1‑140 (MQ=255)

                                                            ggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAg                                                                      <  2:948203/140‑1 (MQ=255)

                                                            ggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAg                                                                      <  1:1198782/140‑1 (MQ=255)

                                                             gAAACGGGAGGGGGGTCTATGATGTCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGa                                                                     <  2:201378/140‑1 (MQ=255)

                                                               aaCGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACg                                                                   <  2:519452/140‑1 (MQ=255)

                                                                    gaggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCa                                                              <  1:855085/140‑1 (MQ=255)

                                                                      ggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCaga                                                            >  2:1050721/1‑140 (MQ=255)

                                                                      ggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCaga                                                            >  2:200604/1‑140 (MQ=255)

                                                                      ggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCaga                                                            >  1:1085287/1‑140 (MQ=255)

                                                                       gggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGCCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGa                                                                        <  2:457650/127‑1 (MQ=255)

                                                                       gggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGCCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGa                                                                        >  1:457650/1‑127 (MQ=255)

                                                                           gTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATgg                                                       <  1:124825/140‑1 (MQ=255)

                                                                             cTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCa                                                     <  2:1085287/140‑1 (MQ=255)

                                                                              tATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCaa                                                    >  1:501016/1‑140 (MQ=255)

                                                                                tgatgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAAt                                                  <  1:923/140‑1 (MQ=255)

                                                                                      cGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACct                                            >  1:975126/1‑140 (MQ=255)

                                                                                      cGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACct                                            <  1:33617/140‑1 (MQ=255)

                                                                                          ggCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTg                                        >  2:266905/1‑140 (MQ=255)

                                                                                            cgcAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACct                                            >  2:1171049/1‑134 (MQ=255)

                                                                                            cgcAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACct                                            <  1:1171049/134‑1 (MQ=255)

                                                                                            cgcAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCt                                      <  1:670360/140‑1 (MQ=255)

                                                                                            cgcAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTCGCAGAGATGGCAAATTTACCTCTTGCt                                      <  1:74728/140‑1 (MQ=255)

                                                                                              cAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTga                                    <  2:148232/140‑1 (MQ=255)

                                                                                                     ttGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGAt                             >  2:275295/1‑140 (MQ=255)

                                                                                                      tGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATa                            >  2:641488/1‑140 (MQ=255)

                                                                                                      tGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATa                            <  1:1050721/140‑1 (MQ=255)

                                                                                                      tGAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATa                            <  2:1135519/140‑1 (MQ=255)

                                                                                                       gAAGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATaa                           <  1:192644/140‑1 (MQ=255)

                                                                                                        aaGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAg                          >  1:732508/1‑140 (MQ=255)

                                                                                                        aaGAGAAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAg                          <  1:953762/140‑1 (MQ=255)

                                                                                                           agaAAGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTa                       >  1:675912/1‑140 (MQ=255)

                                                                                                             aaaGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATa                            <  2:559538/133‑1 (MQ=255)

                                                                                                             aaaGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATa                            >  1:559538/1‑133 (MQ=255)

                                                                                                             aaaGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAAt                     >  2:264147/1‑140 (MQ=255)

                                                                                                              aaGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATaa                           >  1:1091831/1‑133 (MQ=255)

                                                                                                              aaGGGATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATaa                           <  2:1091831/133‑1 (MQ=255)

                                                                                                                 ggATTGAGAAGGGGATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAAc                 <  1:170503/140‑1 (MQ=255)

                                                                                                                            gggATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGt      >  1:131532/1‑140 (MQ=255)

                                                                                                                            gggATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGt      >  2:574416/1‑140 (MQ=255)

                                                                                                                            gggATTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGt      >  1:190482/1‑140 (MQ=255)

                                                                                                                               aTTCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAc   <  1:1158033/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  1:306585/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  2:732508/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  1:536472/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  1:221240/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  1:592230/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  1:1082882/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  2:951830/140‑1 (MQ=255)

                                                                                                                                ttCCGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAcc  <  2:501016/140‑1 (MQ=255)

TATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTACC  >  NC_000913/147609‑147876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`