Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,653,971 T→G noncoding (117/304 nt) ryfA → small regulatory RNA RyfA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,653,9710TG100.0% 400.0 / NA 101noncoding (117/304 nt)ryfAsmall regulatory RNA RyfA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (50/51);  total (50/51)

Only 100 of 101 total aligned reads displayed.

CTGTTAGTGTATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGTCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTAACA  >  NC_000913/2653835‑2654106
                                                                                                                                        |                                                                                                                                       
cTGTTAGTGTATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGt                                                                                                                                      >  2:380457/1‑140 (MQ=255)
cTGTTAGTGTATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGt                                                                                                                                      >  1:275383/1‑140 (MQ=255)
   ttAGTGTATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGAt                                                                                                                                   >  1:726990/1‑140 (MQ=255)
     aGTGTATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGc                                                                                                                                 <  2:1201971/140‑1 (MQ=255)
      gtgtATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCg                                                                                                                                <  1:380457/140‑1 (MQ=255)
       tgtATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCgg                                                                                                                               <  1:194146/140‑1 (MQ=255)
        gtATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGt                                                                                                                              >  1:122092/1‑140 (MQ=255)
         tattatCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTc                                                                                                                             <  2:275383/140‑1 (MQ=255)
         tattatCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTc                                                                                                                             <  2:1050594/140‑1 (MQ=255)
           ttatCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCtt                                                                                                                           >  2:754349/1‑140 (MQ=255)
           ttatCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCtt                                                                                                                           >  2:443803/1‑140 (MQ=255)
             atCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGc                                                                                                                                 >  1:989914/1‑132 (MQ=255)
             atCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGc                                                                                                                                 <  2:989914/132‑1 (MQ=255)
             atCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCg                                                                                                                         >  2:1330370/1‑140 (MQ=255)
             atCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCg                                                                                                                         >  1:63590/1‑140 (MQ=255)
             atCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCg                                                                                                                         >  1:417494/1‑140 (MQ=255)
              tCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGc                                                                                                                        <  2:417494/140‑1 (MQ=255)
                cACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCAt                                                                                                                      >  1:642160/1‑140 (MQ=255)
                 aCTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGAt                                                                                                                                   >  2:1382722/1‑126 (MQ=255)
                 aCTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGAt                                                                                                                                   <  1:1382722/126‑1 (MQ=255)
                 aCTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATg                                                                                                                     >  2:1198236/1‑140 (MQ=255)
                 aCTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATg                                                                                                                     >  1:827884/1‑140 (MQ=255)
                 aCTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTT‑‑CAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  1:580221/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  >  2:787940/1‑125 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  >  2:782626/1‑125 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  <  1:787940/125‑1 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  <  1:782626/125‑1 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGc                                                                                                                                 <  1:571314/126‑1 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGc                                                                                                                                 >  2:571314/1‑126 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  2:424981/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  1:1207110/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  2:476104/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   <  1:1330370/140‑1 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  2:85929/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  1:354999/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  2:932401/1‑140 (MQ=255)
                   tGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  2:1379099/1‑140 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  >  2:229510/1‑123 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  <  2:162886/123‑1 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  >  1:162886/1‑123 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATg                                                                                                                                  <  1:229510/123‑1 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGAcc                                                                                                                 >  1:537794/1‑140 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGAcc                                                                                                                 >  2:929441/1‑140 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGAcc                                                                                                                 >  1:947065/1‑140 (MQ=255)
                     cGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGAcc                                                                                                                 >  1:743042/1‑140 (MQ=255)
                      ggCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCg                                                                                                                <  1:1088653/140‑1 (MQ=255)
                        cccTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   <  2:472074/135‑1 (MQ=255)
                        cccTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGa                                                                                                                   >  1:472074/1‑135 (MQ=255)
                        cccTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGca                                                                                                              >  1:690216/1‑140 (MQ=255)
                        cccTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGca                                                                                                              <  1:929441/140‑1 (MQ=255)
                        cccTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGca                                                                                                              >  1:801623/1‑140 (MQ=255)
                           tttCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACaa                                                                                                           <  2:726990/140‑1 (MQ=255)
                           tttCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACaa                                                                                                           <  1:1015802/140‑1 (MQ=255)
                            ttCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAAt                                                                                                          >  1:806558/1‑140 (MQ=255)
                             tCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATg                                                                                                         <  2:827884/140‑1 (MQ=255)
                                   gTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATa                                                                                                   <  1:1198236/140‑1 (MQ=255)
                                   gTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATa                                                                                                   <  1:424981/140‑1 (MQ=255)
                                    tctcGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATAc                                                                                                  <  1:192380/140‑1 (MQ=255)
                                    tctcGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATAc                                                                                                  >  2:192380/1‑140 (MQ=255)
                                    tctcGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATAc                                                                                                  <  1:484809/140‑1 (MQ=255)
                                      tcGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACgg                                                                                                <  2:1207110/140‑1 (MQ=255)
                                       cGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGt                                                                                               <  2:354999/140‑1 (MQ=255)
                                        gCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTg                                                                                              <  1:314362/140‑1 (MQ=255)
                                           aaCGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCtt                                                                                           <  2:801623/140‑1 (MQ=255)
                                             cGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCtttt                                                                                         <  2:122092/140‑1 (MQ=255)
                                                 cgcTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTAt                                                                                     <  1:85929/140‑1 (MQ=255)
                                                   cTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCg                                                                                   <  2:537794/140‑1 (MQ=255)
                                                     ggCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTa                                                                                 <  1:443803/140‑1 (MQ=255)
                                                      gCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTAc                                                                                >  2:579069/1‑140 (MQ=255)
                                                                  gATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTg                                                                    >  2:380372/1‑140 (MQ=255)
                                                                    tGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTg                                                                    >  1:601319/1‑138 (MQ=255)
                                                                    tGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTg                                                                    <  2:601319/138‑1 (MQ=255)
                                                                    tGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGt                                                                  >  2:191978/1‑140 (MQ=255)
                                                                     gTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTg                                                                 <  2:873673/140‑1 (MQ=255)
                                                                      ttCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTgc                                                                <  2:1108604/140‑1 (MQ=255)
                                                                       tCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTgcg                                                               <  2:618738/140‑1 (MQ=255)
                                                                         cGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCt                                                             <  1:476104/140‑1 (MQ=255)
                                                                           tGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGt                                                           <  1:625210/140‑1 (MQ=255)
                                                                                gTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAAcc                                                      <  2:690216/140‑1 (MQ=255)
                                                                                gTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTATTTCTGGTGCGCTGTTAAcc                                                      <  1:295221/140‑1 (MQ=255)
                                                                                 tAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCg                                                     <  1:1379099/140‑1 (MQ=255)
                                                                                        aGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTaaa                                              >  1:965158/1‑140 (MQ=255)
                                                                                               tCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAAc                                       >  2:153418/1‑140 (MQ=255)
                                                                                               tCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAAc                                       <  1:191978/140‑1 (MQ=255)
                                                                                               tCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAAc                                       <  1:754349/140‑1 (MQ=255)
                                                                                                     cgcTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGt                                 >  2:14142/1‑140 (MQ=255)
                                                                                                     cgcTTGCTATCGCGGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGt                                 >  2:738221/1‑140 (MQ=255)
                                                                                                               cgcgGCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCg                       >  1:548992/1‑140 (MQ=255)
                                                                                                                  ggCAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACa                    >  2:697746/1‑140 (MQ=255)
                                                                                                                    cAATATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAAt                  <  2:580221/140‑1 (MQ=255)
                                                                                                                     aaTATCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAAtt                 <  1:421961/140‑1 (MQ=255)
                                                                                                                        atCGCCAGTGGTGCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTGCTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTAc              <  1:847073/140‑1 (MQ=255)
                                                                                                                                  gtgCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACtggt          <  1:330621/134‑1 (MQ=255)
                                                                                                                                  gtgCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACtggt          >  2:330621/1‑134 (MQ=255)
                                                                                                                                  gtgCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTaa    <  2:63590/140‑1 (MQ=255)
                                                                                                                                   tgCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTaac   <  2:190062/140‑1 (MQ=255)
                                                                                                                                   tgCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTaac   >  2:108023/1‑140 (MQ=255)
                                                                                                                                    gCTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTaaca  <  1:153418/140‑1 (MQ=255)
                                                                                                                                     cTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTaa    >  2:781656/1‑137 (MQ=255)
                                                                                                                                     cTGGCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTaa    <  1:781656/137‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CTGTTAGTGTATTATCCACTGCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTTAGGAAAGGATGTTCCGTGGCCGTAAATGCAGGTGTTTCACAGCGCTTGCTATCGCGGCAATATCGCCAGTGGTGCTGTCGTGATGCGGTCTTCGCATGGACCGCACAATGAAGATACGGTGCTTTTGTATCGTACTTATTGTTTCTGGTGCGCTGTTAACCGAGGTAAATAATAACCGGAGTCTCTCCGGCGACAATTTACTGGTGGTTAACA  >  NC_000913/2653835‑2654106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑