BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,768,355	C→T	S60L (TCA→TTA)	yibG →	tetratricopeptide‑like domain‑containing protein YibG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,768,355	0	C	T	100.0%	415.9 / NA	115	S60L (TCA→TTA)	yibG	tetratricopeptide‑like domain‑containing protein YibG
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (54/61); total (54/61)

Only 100 of 116 total aligned reads displayed.

TGTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATA  >  NC_000913/3768219‑3768483

 gTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTAttt                                                                                                                              >  1:141094/1‑140 (MQ=255)

    aaTTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGa                                                                                                                           <  1:214639/140‑1 (MQ=255)

    aaTTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGa                                                                                                                           <  1:658426/140‑1 (MQ=255)

        gCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACtat                                                                                                                       <  2:619721/140‑1 (MQ=255)

        gCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACtat                                                                                                                       <  2:101108/140‑1 (MQ=255)

        gCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACtat                                                                                                                       <  1:751396/140‑1 (MQ=255)

        gCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACtat                                                                                                                       <  1:554937/140‑1 (MQ=255)

              tGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAat                                                                                                                 >  2:1209968/1‑140 (MQ=255)

                cTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATc                                                                                                                    >  2:1298096/1‑135 (MQ=255)

                cTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATc                                                                                                                    <  1:1298096/135‑1 (MQ=255)

                 tGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACtat                                                                                                                       <  2:21154/131‑1 (MQ=255)

                 tGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACtat                                                                                                                       >  1:21154/1‑131 (MQ=255)

                  gATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTa                                                                                                             >  2:1175667/1‑140 (MQ=255)

                   aTGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTAc                                                                                                            >  2:17018/1‑140 (MQ=255)

                   aTGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTAc                                                                                                            <  1:1094774/140‑1 (MQ=255)

                   aTGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTAc                                                                                                            >  2:1314329/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATc                                                                                                                    <  1:1000977/127‑1 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTATTGCtt                                                                                                       >  2:833768/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCtt                                                                                                       >  1:132750/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCtt                                                                                                       >  2:808851/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCtt                                                                                                       >  1:962106/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCtt                                                                                                       >  1:956651/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCtt                                                                                                       >  2:317312/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCtt                                                                                                       >  1:375228/1‑140 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCt                                                                                                        >  2:263893/1‑139 (MQ=255)

                        aaaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCt                                                                                                        <  1:263893/139‑1 (MQ=255)

                         aaaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCttt                                                                                                      <  1:738310/140‑1 (MQ=255)

                          aaTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTa                                                                                                     <  1:1209968/140‑1 (MQ=255)

                           aTAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTAc                                                                                                    <  2:141094/140‑1 (MQ=255)

                            tAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACt                                                                                                   <  1:1101678/140‑1 (MQ=255)

                            tAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACt                                                                                                   <  2:1064959/140‑1 (MQ=255)

                            tAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACt                                                                                                   <  2:153542/140‑1 (MQ=255)

                            tAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACt                                                                                                   <  2:132750/140‑1 (MQ=255)

                                    aacGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATaa                                                                                           <  2:1203397/140‑1 (MQ=255)

                                      cGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACa                                                                                         >  2:569424/1‑140 (MQ=255)

                                              tgatgGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTacaaa                                                                                 >  2:1287122/1‑140 (MQ=255)

                                              tgatgGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTacaaa                                                                                 >  2:332774/1‑140 (MQ=255)

                                                      tCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCg                                                                         >  1:887713/1‑140 (MQ=255)

                                                      tCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCg                                                                         >  2:1038798/1‑140 (MQ=255)

                                                        tACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGAt                                                                       <  2:1162989/140‑1 (MQ=255)

                                                             cAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTg                                                                  >  2:1245245/1‑140 (MQ=255)

                                                             cAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTg                                                                  >  1:865537/1‑140 (MQ=255)

                                                              aaTGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTgg                                                                 >  2:1160630/1‑140 (MQ=255)

                                                               aTGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGa                                                                >  2:224043/1‑140 (MQ=255)

                                                               aTGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGa                                                                >  2:884098/1‑140 (MQ=255)

                                                               aTGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGa                                                                <  1:17018/140‑1 (MQ=255)

                                                                  aCCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAg                                                             >  1:512811/1‑140 (MQ=255)

                                                                    cTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGAt                                                           >  1:1216325/1‑140 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        <  2:119297/140‑1 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        <  1:332774/140‑1 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        <  1:1314329/140‑1 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        <  1:765697/140‑1 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        >  2:282301/1‑140 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        >  2:745662/1‑140 (MQ=255)

                                                                       tGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        >  1:535145/1‑140 (MQ=255)

                                                                          tttAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCAt                                                     <  2:865537/140‑1 (MQ=255)

                                                                          tttAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCAt                                                     <  2:530570/140‑1 (MQ=255)

                                                                           ttAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCAtc                                                    <  1:928550/140‑1 (MQ=255)

                                                                             aaGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCAtctc                                                  >  2:210701/1‑140 (MQ=255)

                                                                              aGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCAtct                                                   <  2:531574/138‑1 (MQ=255)

                                                                              aGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCAtct                                                   >  1:531574/1‑138 (MQ=255)

                                                                              aGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCa                                                 >  2:789011/1‑140 (MQ=255)

                                                                              aGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCa                                                 >  1:72754/1‑140 (MQ=255)

                                                                              aGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCa                                                 >  1:211306/1‑140 (MQ=255)

                                                                              aGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAAAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCa                                                 >  2:72437/1‑140 (MQ=255)

                                                                               gTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAg                                                <  2:973528/140‑1 (MQ=255)

                                                                               gTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAg                                                <  1:317312/140‑1 (MQ=255)

                                                                                 gaagaaAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        >  1:1085459/1‑130 (MQ=255)

                                                                                 gaagaaAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAg                                                        <  2:1085459/130‑1 (MQ=255)

                                                                                 gaagaaAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAggg                                              <  2:887713/140‑1 (MQ=255)

                                                                                 gaagaaAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAggg                                              <  1:569424/140‑1 (MQ=255)

                                                                                   agaaAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGa                                            >  1:132745/1‑140 (MQ=255)

                                                                                     aaaaGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAAt                                          >  2:1304922/1‑140 (MQ=255)

                                                                                     aaaaGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAAt                                          >  2:1099663/1‑140 (MQ=255)

                                                                                         gTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTa                                      <  1:1038798/140‑1 (MQ=255)

                                                                                            gatgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAg                                   <  2:956651/140‑1 (MQ=255)

                                                                                             atgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgc                                  <  2:962106/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  1:789011/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  1:808851/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  2:211306/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  1:983181/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  2:1380521/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  2:741064/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  1:1252843/140‑1 (MQ=255)

                                                                                              tgaAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAgcg                                 <  1:1163017/140‑1 (MQ=255)

                                                                                                   cTGAAGTATAAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGtt                            <  1:1175667/140‑1 (MQ=255)

                                                                                                         tataAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTa                      <  1:750289/140‑1 (MQ=255)

                                                                                                         tataAATCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTa                      <  1:1055885/140‑1 (MQ=255)

                                                                                                            aaaTCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATgg                   >  1:726451/1‑140 (MQ=255)

                                                                                                             aaTCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATggg                  <  2:549826/140‑1 (MQ=255)

                                                                                                             aaTCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATggg                  <  1:1304922/140‑1 (MQ=255)

                                                                                                             aaTCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATggg                  <  1:1099663/140‑1 (MQ=255)

                                                                                                              aTCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATggg                  >  2:1255011/1‑139 (MQ=255)

                                                                                                              aTCACAACATGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATggg                  <  1:1255011/139‑1 (MQ=255)

                                                                                                                   aacaTGGTGTTTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTAT‑GGGTCtttt           >  1:1332943/1‑140 (MQ=255)

                                                                                                                   aacaTGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCttt            >  2:382261/1‑140 (MQ=255)

                                                                                                                   aacaTGGTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCttt            >  2:379294/1‑140 (MQ=255)

                                                                                                                        ggTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATc       >  1:42011/1‑140 (MQ=255)

                                                                                                                        ggTGATTCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATc       >  1:887193/1‑140 (MQ=255)

                                                                                                                             ttCAGAGGCATTATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATa  >  2:778093/1‑140 (MQ=255)

TGTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATA  >  NC_000913/3768219‑3768483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`