Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,304	(A)5→4	coding (185/435 nt)	marR →	DNA‑binding transcriptional repressor MarR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,300	0	A	.	100.0%	267.7 / NA	62	coding (181/435 nt)	marR	DNA‑binding transcriptional repressor MarR
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (32/30);  total (32/30)

GGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGC  >  NC_000913/1619162‑1619431                                                                                                                                           |                                                                                                                                    ggTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaa                                                                                                                                    <  1:339313/140‑1 (MQ=255)   tCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTTGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaaaa                                                                                                                                  >  2:68169/1‑140 (MQ=255)   tCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaaaa                                                                                                                                  >  1:927547/1‑140 (MQ=255)              atatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcgg                                                                                                                      <  2:818996/140‑1 (MQ=255)               tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                     <  1:768069/140‑1 (MQ=255)               tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                     >  1:785561/1‑140 (MQ=255)               tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                     <  1:427626/140‑1 (MQ=255)               tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCACGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                     <  2:903702/140‑1 (MQ=255)                  ggTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGa                                                                                                                  <  2:785561/140‑1 (MQ=255)                  ggTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCAGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGa                                                                                                                  <  1:272413/140‑1 (MQ=255)                   gTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGAc                                                                                                                 <  1:155076/140‑1 (MQ=255)                    ttAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGAcc                                                                                                                >  2:599435/1‑140 (MQ=255)                      aaTCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTg                                                                                                              >  2:223739/1‑140 (MQ=255)                       aTCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTgg                                                                                                             <  1:479527/140‑1 (MQ=255)                       aTCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTgg                                                                                                             >  2:525722/1‑140 (MQ=255)                            aagaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCa                                                                                                        <  1:835169/140‑1 (MQ=255)                            aagaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCa                                                                                                        >  1:558275/1‑140 (MQ=255)                             agaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCCCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCAc                                                                                                       >  1:807525/1‑140 (MQ=255)                              gaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCa                                                                                                        >  2:769386/1‑138 (MQ=255)                              gaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCa                                                                                                        <  1:769386/138‑1 (MQ=255)                              gaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACt                                                                                                      >  2:165334/1‑140 (MQ=255)                                  gaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAcc                                                                                                  >  2:205241/1‑140 (MQ=255)                                   aTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAccc                                                                                                 <  1:694273/140‑1 (MQ=255)                                   aTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAccc                                                                                                 <  1:525722/140‑1 (MQ=255)                                      gCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTa                                                                                              >  2:367939/1‑140 (MQ=255)                                          gCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCt                                                                                          <  2:556520/140‑1 (MQ=255)                                          gCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCt                                                                                          >  2:77570/1‑140 (MQ=255)                                          gCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCt                                                                                          >  2:869707/1‑140 (MQ=255)                                              aaCGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGAt                                                                                      <  2:718952/140‑1 (MQ=255)                                                     aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTTAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                               >  1:503343/1‑140 (MQ=255)                                                     aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                               >  1:588126/1‑140 (MQ=255)                                                     aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                               <  2:927547/140‑1 (MQ=255)                                                     aTCTGTCTACGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                               >  1:67680/1‑140 (MQ=255)                                                     aTCTGTCTACGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                               <  2:67680/140‑1 (MQ=255)                                                      tCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGt                                                                              <  2:542371/140‑1 (MQ=255)                                                            tcCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTaa                                                                        >  2:155690/1‑140 (MQ=255)                                                             ccGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTaaa                                                                       >  2:243938/1‑140 (MQ=255)                                                               gCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAgg                                                                     <  1:155690/140‑1 (MQ=255)                                                               gCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAgg                                                                     <  2:588126/140‑1 (MQ=255)                                                                   gATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGcc                                                                                  >  1:758418/1‑123 (MQ=255)                                                                   gATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGcc                                                                                  <  2:758418/123‑1 (MQ=255)                                                                       ttACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTgg                                                             <  1:205241/140‑1 (MQ=255)                                                                        tACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGa                                                            <  1:243938/140‑1 (MQ=255)                                                                           cgcgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCAGTATGCTGGATCGCCTGGTCTGTAAAGGCt                                                                   >  2:273720/1‑130 (MQ=255)                                                                           cgcgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCAGTATGCTGGATCGCCTGGTCTGTAAAGGCt                                                                   <  1:273720/130‑1 (MQ=255)                                                                             cgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGt                                                       >  1:412466/1‑140 (MQ=255)                                                                             cgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGt                                                       >  1:322217/1‑140 (MQ=255)                                                                             cgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGt                                                       >  1:536824/1‑140 (MQ=255)                                                                                  caGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCg                                                  <  1:599435/140‑1 (MQ=255)                                                                                      ttAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAAcc                                              <  1:165334/140‑1 (MQ=255)                                                                                             gctctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGc                                                    <  1:779151/127‑1 (MQ=255)                                                                                             gctctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGc                                                    >  2:779151/1‑127 (MQ=255)                                                                                             gctctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGa                                       >  1:161016/1‑140 (MQ=255)                                                                                               tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGAACGCCTGGTCTGTAAAGGCTGGGCGGAAAGGTTGCCGAACCCGAATGACa                                     >  2:578325/1‑140 (MQ=255)                                                                                                ctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACaa                                    <  2:161016/140‑1 (MQ=255)                                                                                                    tctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAgcgc                                <  2:807525/140‑1 (MQ=255)                                                                                                           gCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGcgcg                               <  1:919265/134‑1 (MQ=255)                                                                                                           gCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGcgcg                               >  2:919265/1‑134 (MQ=255)                                                                                                             tGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTCCTg                       >  2:343058/1‑140 (MQ=255)                                                                                                             tGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTg                       >  2:633818/1‑140 (MQ=255)                                                                                                                gcggcgTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTa                    <  2:723545/140‑1 (MQ=255)                                                                                                                 cggcgTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTaa                   >  1:283663/1‑140 (MQ=255)                                                                                                                                cGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcg    >  2:641981/1‑140 (MQ=255)                                                                                                                                cGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcg    >  2:605264/1‑140 (MQ=255)                                                                                                                                  gTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCggcggc  >  1:438283/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                    GGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGC  >  NC_000913/1619162‑1619431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑