| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,062,185 | Δ462 bp | [yihN] | [yihN] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4062185 | 4062646 | 462 | 72 [0] | [0] 72 | [yihN] | [yihN] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4062184 | 0 (0.000) | 72 (1.300) | 55/274 | 0.0 | 100% | intergenic (+39/‑63) | yihM/yihN | putative TIM barrel domain‑containing protein YihM/putative transporter YihN |
| ? | NC_000913 | 4062647 = | 0 (0.000) | coding (401/1266 nt) | yihN | putative transporter YihN | |||||
TACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTC > NC_000913/4062048‑4062320 | tACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgt > 2:16444‑M1/1‑137 (MQ=255) aaagaaaaagaaGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggc < 2:703589‑M1/140‑9 (MQ=255) agaaaaagaaGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggctt > 1:399782‑M1/1‑130 (MQ=255) aaaaagaaGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttct > 2:362580‑M1/1‑128 (MQ=255) agaagaTGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcga > 1:789065‑M1/1‑124 (MQ=255) aaTTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcg < 1:493695‑M1/140‑26 (MQ=255) tAATCAGATAAATCATGTGCGTAACGTACAACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtgg > 2:485399‑M1/1‑112 (MQ=255) aaTCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggc > 1:409048‑M1/1‑111 (MQ=255) aTCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggca < 2:409048‑M1/140‑31 (MQ=255) tCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcat < 2:175864‑M1/140‑32 (MQ=255) tCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcat < 1:726121‑M1/140‑32 (MQ=255) gATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgt > 2:365423‑M1/1‑106 (MQ=255) tAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcg > 1:528519‑M1/1‑104 (MQ=255) tgtgCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgt > 1:338672‑M1/1‑97 (MQ=255) tgCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtgg > 2:166231‑M1/1‑95 (MQ=255) tgCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtgg > 2:780654‑M1/1‑95 (MQ=255) cGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggca < 2:103170‑M1/123‑31 (MQ=255) cGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggca > 1:103170‑M1/1‑93 (MQ=255) gTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtgg < 2:338672‑M1/140‑49 (MQ=255) tAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggc > 2:690177‑M1/1‑91 (MQ=255) aaCGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggca > 1:682704‑M1/1‑90 (MQ=255) actacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttc > 1:523002‑M1/1‑85 (MQ=255) actacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttc > 1:798759‑M1/1‑85 (MQ=255) acaacaAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgc > 1:371631‑M1/1‑82 (MQ=255) aacaaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgt > 1:97610‑M1/1‑80 (MQ=255) caaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttg > 2:325103‑M1/1‑78 (MQ=255) caaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttg > 1:278799‑M1/1‑78 (MQ=255) caaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggc > 2:382164‑M1/1‑78 (MQ=255) caaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggc < 1:382164‑M1/127‑50 (MQ=255) aaaTCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttgg < 2:919038‑M1/140‑64 (MQ=255) tCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcag > 2:897714‑M1/1‑74 (MQ=255) aaCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggc > 2:486273‑M1/1‑71 (MQ=255) aaCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggc < 1:486273‑M1/135‑65 (MQ=255) gagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacc < 2:789065‑M1/140‑75 (MQ=255) gagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacc < 2:406546‑M1/140‑75 (MQ=255) cAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggt < 1:897714‑M1/140‑79 (MQ=255) cAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggt < 2:278799‑M1/140‑79 (MQ=255) tcttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcag < 2:523002‑M1/140‑86 (MQ=255) cttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagt < 1:115026‑M1/140‑87 (MQ=255) cttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagt < 2:399782‑M1/140‑87 (MQ=255) ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtg < 2:371631‑M1/140‑88 (MQ=255) aaCCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggctta > 2:293692‑M1/1‑48 (MQ=255) aCCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttat > 2:260357‑M1/1‑47 (MQ=255) cACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttatta > 1:684649‑M1/1‑45 (MQ=255) cTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattagg > 2:64342‑M1/1‑43 (MQ=255) cTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtattcacctggtttggcagtggcttattagg > 2:676610‑M1/1‑43 (MQ=255) ataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttt > 1:682789‑M1/1‑40 (MQ=255) ttAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagca > 2:300707‑M1/1‑33 (MQ=255) ttAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagca < 1:431314‑M1/140‑108 (MQ=255) ttAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagca > 1:845118‑M1/1‑33 (MQ=255) tAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcag > 1:914691‑M1/1‑32 (MQ=255) tAACTCATACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcag < 1:166231‑M1/140‑109 (MQ=255) aTACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatct > 1:891727‑M1/1‑26 (MQ=255) tACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctg > 1:865024‑M1/1‑25 (MQ=255) tACGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctg > 1:478746‑M1/1‑25 (MQ=255) aCGCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctgg < 1:64342‑M1/140‑117 (MQ=255) gCAGTTAATAAAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggtt < 2:798759‑M1/140‑119 (MQ=255) taataaAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctatt < 2:330714‑M1/140‑124 (MQ=255) aataaAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatc > 2:62042‑M1/1‑16 (MQ=255) aataaAACCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatc < 1:62042‑M1/129‑114 (MQ=255) aCCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatc > 2:62850‑M1/1‑10 (MQ=255) aCCATTCCATtgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatc < 1:62850‑M1/123‑114 (MQ=255) ttccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttattgtg > 1:866627‑M1/1‑6 (MQ=255) ttccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttattgtg > 1:662154‑M1/1‑6 (MQ=255) ttccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttattgtg > 2:75710‑M1/1‑6 (MQ=255) ttccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcc < 2:738039‑M1/131‑126 (MQ=255) ttccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcc > 1:738039‑M1/1‑6 (MQ=255) tccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttattgtga < 2:914691‑M1/140‑136 (MQ=255) tccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttat < 1:40967‑M1/135‑131 (MQ=255) tccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttat > 2:40967‑M1/1‑5 (MQ=255) tccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcacgcatctggttctattcccttattgtga < 2:845118‑M1/140‑136 (MQ=255) ccattgtttggcttcttcgaaacagggcgtggcattgtcgataccgtggtggcattttctgcgttggcagtatttacctggtttggcagtggcttattaggttttaaagcaggcatctggttctattcccttattgtgat < 1:75710‑M1/140‑137 (MQ=255) | TACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTC > NC_000913/4062048‑4062320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |